RNA–Protein interactions for RNA: ENST00000484990.1

COL13A1-209, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 360 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-209ENST00000484990 KRTAP12-4P60329 112 aa3.84□□□□□ -1.79
COL13A1-209ENST00000484990 KRTAP4-7Q9BYR0 210 aa3.82□□□□□ -1.8
COL13A1-209ENST00000484990 SMIM26A0A096LP01 95 aa3.81□□□□□ -1.8
COL13A1-209ENST00000484990 KRTAP5-5Q701N2 237 aaPredicted RBP3.78□□□□□ -1.8
COL13A1-209ENST00000484990 KRTAP12-3P60328 96 aa3.77□□□□□ -1.81
COL13A1-209ENST00000484990 SERP2Q8N6R1 65 aa3.74□□□□□ -1.81
COL13A1-209ENST00000484990 A8MU10 97 aa3.71□□□□□ -1.82
COL13A1-209ENST00000484990 SYNE1Q8NF91 8797 aaKnown RBP3.7□□□□□ -1.82
COL13A1-209ENST00000484990 A0A1B0GU69 56 aa3.69□□□□□ -1.82
COL13A1-209ENST00000484990 K7ERU9 68 aa3.68□□□□□ -1.82
COL13A1-209ENST00000484990 LOC100996750A0A140TA64 210 aa3.64□□□□□ -1.83
COL13A1-209ENST00000484990 KRTAP4-11Q9BYQ6 195 aa3.64□□□□□ -1.83
COL13A1-209ENST00000484990 KRTAP19-4Q3LI73 84 aa3.61□□□□□ -1.83
COL13A1-209ENST00000484990 H7BZZ5 65 aa3.53□□□□□ -1.84
COL13A1-209ENST00000484990 COX7CP15954 63 aa3.53□□□□□ -1.84
COL13A1-209ENST00000484990 KRTAP5-2Q701N4 177 aa3.52□□□□□ -1.85
COL13A1-209ENST00000484990 PRR15LQ9BU68 103 aa3.52□□□□□ -1.85
COL13A1-209ENST00000484990 KRTAP5-8O75690 187 aa3.51□□□□□ -1.85
COL13A1-209ENST00000484990 KRTAP25-1Q3LHN0 102 aa3.49□□□□□ -1.85
COL13A1-209ENST00000484990 MUC5BQ9HC84 5762 aaPredicted RBP3.46□□□□□ -1.86
COL13A1-209ENST00000484990 MT1AP04731 61 aa3.45□□□□□ -1.86
COL13A1-209ENST00000484990 KRTAP6-1Q3LI64 71 aa3.44□□□□□ -1.86
COL13A1-209ENST00000484990 LCE3CQ5T5A8 94 aa3.44□□□□□ -1.86
COL13A1-209ENST00000484990 KRTAP15-1Q3LI76 137 aa3.43□□□□□ -1.86
COL13A1-209ENST00000484990 KRTAP9-9Q9BYP9 154 aa3.43□□□□□ -1.86
COL13A1-209ENST00000484990 MUC5ACP98088 5654 aa3.42□□□□□ -1.86
COL13A1-209ENST00000484990 AHNAKQ09666 5890 aaKnown RBP3.41□□□□□ -1.86
COL13A1-209ENST00000484990 OBSCNQ5VST9 7968 aa3.4□□□□□ -1.86
COL13A1-209ENST00000484990 UQCR11O14957 56 aa3.39□□□□□ -1.87
COL13A1-209ENST00000484990 KRTAP9-4Q9BYQ2 154 aa3.39□□□□□ -1.87
COL13A1-209ENST00000484990 LINC01558Q9Y6Z2 57 aa3.37□□□□□ -1.87
COL13A1-209ENST00000484990 KRTAP23-1A1A580 65 aa3.36□□□□□ -1.87
COL13A1-209ENST00000484990 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
COL13A1-209ENST00000484990 K7ERS5 55 aa3.32□□□□□ -1.88
COL13A1-209ENST00000484990 ATP5EP56381 51 aaPredicted RBP3.26□□□□□ -1.89
COL13A1-209ENST00000484990 MIR22HGQ0VDD5 57 aa3.26□□□□□ -1.89
COL13A1-209ENST00000484990 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
COL13A1-209ENST00000484990 ANAPC13Q9BS18 74 aa3.22□□□□□ -1.89
COL13A1-209ENST00000484990 MT3P25713 68 aa3.21□□□□□ -1.9
COL13A1-209ENST00000484990 KRTAP9-6A8MVA2 160 aa3.19□□□□□ -1.9
COL13A1-209ENST00000484990 CCDC179H3BU77 68 aa3.14□□□□□ -1.91
COL13A1-209ENST00000484990 RPS28P62857 69 aaKnown RBP3.14□□□□□ -1.91
COL13A1-209ENST00000484990 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
COL13A1-209ENST00000484990 CDC42SE1Q9NRR8 79 aa3.05□□□□□ -1.92
COL13A1-209ENST00000484990 Q1T7F1 81 aa3.04□□□□□ -1.92
COL13A1-209ENST00000484990 TMEM258P61165 79 aa3.03□□□□□ -1.92
COL13A1-209ENST00000484990 LCE1EQ5T753 118 aa3.01□□□□□ -1.93
COL13A1-209ENST00000484990 PSPHP1O15172 72 aa3□□□□□ -1.93
COL13A1-209ENST00000484990 V9GYY9 64 aa3□□□□□ -1.93
COL13A1-209ENST00000484990 ROMO1P60602 79 aa2.97□□□□□ -1.93
COL13A1-209ENST00000484990 A6NED7 52 aa2.89□□□□□ -1.95
COL13A1-209ENST00000484990 LCE1BQ5T7P3 118 aa2.85□□□□□ -1.95
COL13A1-209ENST00000484990 KRTAP4-2Q9BYR5 136 aa2.83□□□□□ -1.96
COL13A1-209ENST00000484990 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
COL13A1-209ENST00000484990 H3BS24 57 aa2.77□□□□□ -1.97
COL13A1-209ENST00000484990 LCE1FQ5T754 118 aa2.58□□□□□ -2
COL13A1-209ENST00000484990 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
COL13A1-209ENST00000484990 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.49□□□□□ -2.01
COL13A1-209ENST00000484990 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
COL13A1-209ENST00000484990 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
COL13A1-209ENST00000484990 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
COL13A1-209ENST00000484990 LCE3EQ5T5B0 92 aa2.24□□□□□ -2.05
COL13A1-209ENST00000484990 KRTAP4-4Q9BYR3 166 aa2.12□□□□□ -2.07
COL13A1-209ENST00000484990 BRK1Q8WUW1 75 aa2.11□□□□□ -2.07
COL13A1-209ENST00000484990 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
COL13A1-209ENST00000484990 PCP4P48539 62 aa2.06□□□□□ -2.08
COL13A1-209ENST00000484990 PMAIP1Q13794 54 aa1.97□□□□□ -2.09
COL13A1-209ENST00000484990 PRAC1Q96KF2 57 aa1.92□□□□□ -2.1
COL13A1-209ENST00000484990 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
COL13A1-209ENST00000484990 LUZP6Q538Z0 58 aa1.78□□□□□ -2.12
COL13A1-209ENST00000484990 PRO0628Q9UI54 55 aa1.58□□□□□ -2.16
COL13A1-209ENST00000484990 KTN1-AS1Q86SY8 53 aa1.54□□□□□ -2.16
COL13A1-209ENST00000484990 SVIPQ8NHG7 77 aa1.5□□□□□ -2.17
COL13A1-209ENST00000484990 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
COL13A1-209ENST00000484990 PRM1P04553 51 aa1.48□□□□□ -2.17
COL13A1-209ENST00000484990 A0A0A0MQY5 61 aa1.47□□□□□ -2.17
COL13A1-209ENST00000484990 NDUFAF8A1L188 74 aa1.31□□□□□ -2.2
COL13A1-209ENST00000484990 INE1O15225 51 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 54.5 ms