RNA–Protein interactions for RNA: ENST00000484907.1

CDC16-208, Transcript of cell division cycle 16, humanhuman

TSL 3

Gene CDC16, Length 1,038 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC16-208ENST00000484907 LCE1FQ5T754 118 aa4.52□□□□□ -1.69
CDC16-208ENST00000484907 KRTAP9-6A8MVA2 160 aa4.49□□□□□ -1.69
CDC16-208ENST00000484907 MT1BP07438 61 aa4.44□□□□□ -1.7
CDC16-208ENST00000484907 PP632Q6XCG6 107 aa4.44□□□□□ -1.7
CDC16-208ENST00000484907 TNP1P09430 55 aa4.43□□□□□ -1.7
CDC16-208ENST00000484907 KRTAP5-4Q6L8H1 288 aa4.36□□□□□ -1.71
CDC16-208ENST00000484907 KRTAP4-4Q9BYR3 166 aa4.34□□□□□ -1.71
CDC16-208ENST00000484907 MT1XP80297 61 aa4.33□□□□□ -1.72
CDC16-208ENST00000484907 LCE3CQ5T5A8 94 aa4.28□□□□□ -1.72
CDC16-208ENST00000484907 PRO2289Q9P1D8 64 aa4.27□□□□□ -1.73
CDC16-208ENST00000484907 KRTAP5-9P26371 169 aa4.26□□□□□ -1.73
CDC16-208ENST00000484907 LCE3AQ5TA76 89 aa4.18□□□□□ -1.74
CDC16-208ENST00000484907 KRTAP8-1Q8IUC2 63 aa4.17□□□□□ -1.74
CDC16-208ENST00000484907 USH2AO75445 5202 aa4.1□□□□□ -1.75
CDC16-208ENST00000484907 KRTAP19-6Q3LI70 58 aa4.06□□□□□ -1.76
CDC16-208ENST00000484907 KRTAP12-3P60328 96 aa4.03□□□□□ -1.76
CDC16-208ENST00000484907 SPRR5A0A1B0GTR4 108 aa4.01□□□□□ -1.77
CDC16-208ENST00000484907 NDUFAF8A1L188 74 aa3.99□□□□□ -1.77
CDC16-208ENST00000484907 SSPOA2VEC9 5147 aa3.96□□□□□ -1.78
CDC16-208ENST00000484907 CRCT1Q9UGL9 99 aa3.94□□□□□ -1.78
CDC16-208ENST00000484907 KRTAP19-5Q3LI72 72 aa3.93□□□□□ -1.78
CDC16-208ENST00000484907 LUZP6Q538Z0 58 aa3.9□□□□□ -1.79
CDC16-208ENST00000484907 LCE3EQ5T5B0 92 aa3.89□□□□□ -1.79
CDC16-208ENST00000484907 KRTAP4-3Q9BYR4 195 aa3.89□□□□□ -1.79
CDC16-208ENST00000484907 OBSCNQ5VST9 7968 aa3.89□□□□□ -1.79
CDC16-208ENST00000484907 KRTAP19-7Q3SYF9 63 aa3.86□□□□□ -1.79
CDC16-208ENST00000484907 FSIP2Q5CZC0 6907 aa3.81□□□□□ -1.8
CDC16-208ENST00000484907 MT1EP04732 61 aa3.78□□□□□ -1.8
CDC16-208ENST00000484907 FCGBPQ9Y6R7 5405 aaPredicted RBP3.77□□□□□ -1.81
CDC16-208ENST00000484907 MT1LQ93083 61 aa3.73□□□□□ -1.81
CDC16-208ENST00000484907 KMT2DO14686 5537 aa3.71□□□□□ -1.82
CDC16-208ENST00000484907 MT1GP13640 62 aa3.62□□□□□ -1.83
CDC16-208ENST00000484907 KRTAP5-2Q701N4 177 aa3.6□□□□□ -1.83
CDC16-208ENST00000484907 KRTAP19-3Q7Z4W3 81 aa3.6□□□□□ -1.83
CDC16-208ENST00000484907 MT1MQ8N339 61 aa3.55□□□□□ -1.84
CDC16-208ENST00000484907 SPRR2FQ96RM1 72 aa3.54□□□□□ -1.84
CDC16-208ENST00000484907 KRTAP5-5Q701N2 237 aaPredicted RBP3.53□□□□□ -1.84
CDC16-208ENST00000484907 MACF1Q9UPN3 7388 aaKnown RBP3.45□□□□□ -1.86
CDC16-208ENST00000484907 MUC12Q9UKN1 5478 aa3.45□□□□□ -1.86
CDC16-208ENST00000484907 KRTAP6-3Q3LI67 103 aa3.44□□□□□ -1.86
CDC16-208ENST00000484907 KRTAP2-3P0C7H8 128 aa3.43□□□□□ -1.86
CDC16-208ENST00000484907 KRTAP2-4Q9BYR9 128 aa3.43□□□□□ -1.86
CDC16-208ENST00000484907 KRTAP2-1Q9BYU5 128 aa3.43□□□□□ -1.86
CDC16-208ENST00000484907 SYNE2Q8WXH0 6885 aaKnown RBP3.35□□□□□ -1.87
CDC16-208ENST00000484907 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
CDC16-208ENST00000484907 LCE1BQ5T7P3 118 aa3.35□□□□□ -1.87
CDC16-208ENST00000484907 SPRR2EP22531 72 aa3.32□□□□□ -1.88
CDC16-208ENST00000484907 SPRR2BP35325 72 aa3.32□□□□□ -1.88
CDC16-208ENST00000484907 SPRR2AP35326 72 aa3.32□□□□□ -1.88
CDC16-208ENST00000484907 INE1O15225 51 aa3.3□□□□□ -1.88
CDC16-208ENST00000484907 MDN1Q9NU22 5596 aa3.27□□□□□ -1.89
CDC16-208ENST00000484907 SPRR2DP22532 72 aa3.21□□□□□ -1.9
CDC16-208ENST00000484907 MT1AP04731 61 aa3.19□□□□□ -1.9
CDC16-208ENST00000484907 KRTAP20-1Q3LI63 56 aa3.19□□□□□ -1.9
CDC16-208ENST00000484907 NEBP20929 6669 aa3.17□□□□□ -1.9
CDC16-208ENST00000484907 KRTAP6-1Q3LI64 71 aa3.13□□□□□ -1.91
CDC16-208ENST00000484907 DSTQ03001 7570 aaKnown RBP3.08□□□□□ -1.92
CDC16-208ENST00000484907 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
CDC16-208ENST00000484907 KRTAP5-8O75690 187 aa2.97□□□□□ -1.93
CDC16-208ENST00000484907 KRTAP12-4P60329 112 aa2.93□□□□□ -1.94
CDC16-208ENST00000484907 SYNE1Q8NF91 8797 aaKnown RBP2.91□□□□□ -1.94
CDC16-208ENST00000484907 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
CDC16-208ENST00000484907 KRTAP20-2Q3LI61 65 aa2.76□□□□□ -1.97
CDC16-208ENST00000484907 MT4P47944 62 aa2.75□□□□□ -1.97
CDC16-208ENST00000484907 KRTAP5-7Q6L8G8 165 aa2.75□□□□□ -1.97
CDC16-208ENST00000484907 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
CDC16-208ENST00000484907 HMCN1Q96RW7 5635 aa2.65□□□□□ -1.98
CDC16-208ENST00000484907 GPR98Q8WXG9 6306 aa2.57□□□□□ -2
CDC16-208ENST00000484907 PRM1P04553 51 aa2.49□□□□□ -2.01
CDC16-208ENST00000484907 KRTAP5-10Q6L8G5 202 aa2.47□□□□□ -2.01
CDC16-208ENST00000484907 AHNAK2Q8IVF2 5795 aa2.45□□□□□ -2.02
CDC16-208ENST00000484907 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.03
CDC16-208ENST00000484907 MUC5ACP98088 5654 aa2.29□□□□□ -2.04
CDC16-208ENST00000484907 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
CDC16-208ENST00000484907 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
CDC16-208ENST00000484907 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
CDC16-208ENST00000484907 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
CDC16-208ENST00000484907 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 68.1 ms