RNA–Protein interactions for RNA: ENST00000484767.5

SND1-211, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-211ENST00000484767 MT1FP04733 61 aa3.69□□□□□ -1.82
SND1-211ENST00000484767 SYNE2Q8WXH0 6885 aaKnown RBP3.66□□□□□ -1.82
SND1-211ENST00000484767 INE1O15225 51 aa3.64□□□□□ -1.83
SND1-211ENST00000484767 MT1BP07438 61 aa3.63□□□□□ -1.83
SND1-211ENST00000484767 KRTAP10-5P60370 271 aa3.63□□□□□ -1.83
SND1-211ENST00000484767 MT1XP80297 61 aa3.62□□□□□ -1.83
SND1-211ENST00000484767 MACF1Q9UPN3 7388 aaKnown RBP3.61□□□□□ -1.83
SND1-211ENST00000484767 KRTAP10-12P60413 245 aa3.61□□□□□ -1.83
SND1-211ENST00000484767 KRTAP12-3P60328 96 aa3.6□□□□□ -1.83
SND1-211ENST00000484767 FCGBPQ9Y6R7 5405 aaPredicted RBP3.57□□□□□ -1.84
SND1-211ENST00000484767 SSPOA2VEC9 5147 aa3.57□□□□□ -1.84
SND1-211ENST00000484767 USH2AO75445 5202 aa3.52□□□□□ -1.85
SND1-211ENST00000484767 NEBP20929 6669 aa3.51□□□□□ -1.85
SND1-211ENST00000484767 KRTAP2-2Q9BYT5 123 aa3.48□□□□□ -1.85
SND1-211ENST00000484767 KRTAP10-7P60409 375 aaPredicted RBP3.47□□□□□ -1.85
SND1-211ENST00000484767 KRTAP6-3Q3LI67 103 aa3.41□□□□□ -1.86
SND1-211ENST00000484767 LCE3CQ5T5A8 94 aa3.41□□□□□ -1.86
SND1-211ENST00000484767 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.87
SND1-211ENST00000484767 KRTAP20-1Q3LI63 56 aa3.38□□□□□ -1.87
SND1-211ENST00000484767 KRTAP19-5Q3LI72 72 aa3.38□□□□□ -1.87
SND1-211ENST00000484767 MT3P25713 68 aa3.3□□□□□ -1.88
SND1-211ENST00000484767 MUC12Q9UKN1 5478 aa3.26□□□□□ -1.89
SND1-211ENST00000484767 KRTAP2-3P0C7H8 128 aa3.25□□□□□ -1.89
SND1-211ENST00000484767 KRTAP2-4Q9BYR9 128 aa3.25□□□□□ -1.89
SND1-211ENST00000484767 KRTAP2-1Q9BYU5 128 aa3.25□□□□□ -1.89
SND1-211ENST00000484767 KRTAP19-6Q3LI70 58 aa3.24□□□□□ -1.89
SND1-211ENST00000484767 KRTAP19-7Q3SYF9 63 aa3.22□□□□□ -1.89
SND1-211ENST00000484767 GPR98Q8WXG9 6306 aa3.21□□□□□ -1.9
SND1-211ENST00000484767 KMT2DO14686 5537 aa3.2□□□□□ -1.9
SND1-211ENST00000484767 KRTAP9-6A8MVA2 160 aa3.19□□□□□ -1.9
SND1-211ENST00000484767 MT1LQ93083 61 aa3.17□□□□□ -1.9
SND1-211ENST00000484767 KRTAP5-11Q6L8G4 156 aa3.16□□□□□ -1.9
SND1-211ENST00000484767 MT1EP04732 61 aa3.15□□□□□ -1.91
SND1-211ENST00000484767 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
SND1-211ENST00000484767 MDN1Q9NU22 5596 aa3.11□□□□□ -1.91
SND1-211ENST00000484767 KRTAP5-9P26371 169 aa3.05□□□□□ -1.92
SND1-211ENST00000484767 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
SND1-211ENST00000484767 MT1GP13640 62 aa2.97□□□□□ -1.93
SND1-211ENST00000484767 KRTAP19-3Q7Z4W3 81 aa2.94□□□□□ -1.94
SND1-211ENST00000484767 MT1MQ8N339 61 aa2.94□□□□□ -1.94
SND1-211ENST00000484767 SPRR2EP22531 72 aa2.92□□□□□ -1.94
SND1-211ENST00000484767 SPRR2BP35325 72 aa2.92□□□□□ -1.94
SND1-211ENST00000484767 SPRR2AP35326 72 aa2.92□□□□□ -1.94
SND1-211ENST00000484767 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.95
SND1-211ENST00000484767 KRTAP5-4Q6L8H1 288 aa2.88□□□□□ -1.95
SND1-211ENST00000484767 DSTQ03001 7570 aaKnown RBP2.85□□□□□ -1.95
SND1-211ENST00000484767 SPRR2FQ96RM1 72 aa2.84□□□□□ -1.95
SND1-211ENST00000484767 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
SND1-211ENST00000484767 SPRR2DP22532 72 aa2.83□□□□□ -1.96
SND1-211ENST00000484767 KRTAP4-3Q9BYR4 195 aa2.83□□□□□ -1.96
SND1-211ENST00000484767 KRTAP12-4P60329 112 aa2.81□□□□□ -1.96
SND1-211ENST00000484767 MT1AP04731 61 aa2.8□□□□□ -1.96
SND1-211ENST00000484767 AHNAK2Q8IVF2 5795 aa2.7□□□□□ -1.98
SND1-211ENST00000484767 KRTAP5-10Q6L8G5 202 aa2.67□□□□□ -1.98
SND1-211ENST00000484767 HMCN1Q96RW7 5635 aa2.66□□□□□ -1.98
SND1-211ENST00000484767 LCE3EQ5T5B0 92 aa2.64□□□□□ -1.99
SND1-211ENST00000484767 KRTAP6-1Q3LI64 71 aa2.63□□□□□ -1.99
SND1-211ENST00000484767 KRTAP5-7Q6L8G8 165 aa2.63□□□□□ -1.99
SND1-211ENST00000484767 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
SND1-211ENST00000484767 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
SND1-211ENST00000484767 MT4P47944 62 aa2.52□□□□□ -2.01
SND1-211ENST00000484767 KRTAP5-2Q701N4 177 aa2.51□□□□□ -2.01
SND1-211ENST00000484767 PRM1P04553 51 aa2.49□□□□□ -2.01
SND1-211ENST00000484767 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
SND1-211ENST00000484767 AHNAKQ09666 5890 aaKnown RBP2.41□□□□□ -2.02
SND1-211ENST00000484767 KRTAP6-2Q3LI66 62 aa2.4□□□□□ -2.03
SND1-211ENST00000484767 SYNE1Q8NF91 8797 aaKnown RBP2.33□□□□□ -2.04
SND1-211ENST00000484767 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
SND1-211ENST00000484767 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
SND1-211ENST00000484767 KRTAP20-2Q3LI61 65 aa2.24□□□□□ -2.05
SND1-211ENST00000484767 KRTAP5-8O75690 187 aa2.15□□□□□ -2.07
SND1-211ENST00000484767 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
SND1-211ENST00000484767 LCE1BQ5T7P3 118 aa2.07□□□□□ -2.08
SND1-211ENST00000484767 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
SND1-211ENST00000484767 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
SND1-211ENST00000484767 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
SND1-211ENST00000484767 PHGR1C9JFL3 82 aa1.57□□□□□ -2.16
SND1-211ENST00000484767 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms