RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 KRTAP6-3Q3LI67 103 aa7.5□□□□□ -1.21
VCPKMT-203ENST00000484763 MT1EP04732 61 aa7.49□□□□□ -1.21
VCPKMT-203ENST00000484763 KRTAP9-7A8MTY7 169 aa7.39□□□□□ -1.23
VCPKMT-203ENST00000484763 MUC12Q9UKN1 5478 aa7.38□□□□□ -1.23
VCPKMT-203ENST00000484763 MT1LQ93083 61 aa7.3□□□□□ -1.24
VCPKMT-203ENST00000484763 KRTAP19-3Q7Z4W3 81 aa7.26□□□□□ -1.25
VCPKMT-203ENST00000484763 MDN1Q9NU22 5596 aa7.24□□□□□ -1.25
VCPKMT-203ENST00000484763 LCE1AQ5T7P2 110 aa7.22□□□□□ -1.25
VCPKMT-203ENST00000484763 SPRR2EP22531 72 aa7.2□□□□□ -1.26
VCPKMT-203ENST00000484763 SPRR2BP35325 72 aa7.2□□□□□ -1.26
VCPKMT-203ENST00000484763 SPRR2AP35326 72 aa7.2□□□□□ -1.26
VCPKMT-203ENST00000484763 MT1GP13640 62 aa7.17□□□□□ -1.26
VCPKMT-203ENST00000484763 KRTAP19-4Q3LI73 84 aa7.17□□□□□ -1.26
VCPKMT-203ENST00000484763 LCE5AQ5TCM9 118 aa7.15□□□□□ -1.26
VCPKMT-203ENST00000484763 LCE3CQ5T5A8 94 aa7.07□□□□□ -1.28
VCPKMT-203ENST00000484763 MT1MQ8N339 61 aa7.07□□□□□ -1.28
VCPKMT-203ENST00000484763 NEBP20929 6669 aa7.02□□□□□ -1.29
VCPKMT-203ENST00000484763 KRTAP4-7Q9BYR0 210 aa7.01□□□□□ -1.29
VCPKMT-203ENST00000484763 SPRR2DP22532 72 aa6.95□□□□□ -1.3
VCPKMT-203ENST00000484763 KRTAP4-3Q9BYR4 195 aa6.89□□□□□ -1.31
VCPKMT-203ENST00000484763 SPRR5A0A1B0GTR4 108 aa6.83□□□□□ -1.32
VCPKMT-203ENST00000484763 DSTQ03001 7570 aaKnown RBP6.72□□□□□ -1.33
VCPKMT-203ENST00000484763 LCE3BQ5TA77 95 aa6.69□□□□□ -1.34
VCPKMT-203ENST00000484763 KRTAP9-6A8MVA2 160 aa6.66□□□□□ -1.34
VCPKMT-203ENST00000484763 LOC100996750A0A140TA64 210 aa6.6□□□□□ -1.35
VCPKMT-203ENST00000484763 KRTAP2-3P0C7H8 128 aa6.6□□□□□ -1.35
VCPKMT-203ENST00000484763 KRTAP2-4Q9BYR9 128 aa6.6□□□□□ -1.35
VCPKMT-203ENST00000484763 KRTAP20-1Q3LI63 56 aa6.55□□□□□ -1.36
VCPKMT-203ENST00000484763 KRTAP2-2Q9BYT5 123 aa6.45□□□□□ -1.38
VCPKMT-203ENST00000484763 KRTAP2-1Q9BYU5 128 aa6.45□□□□□ -1.38
VCPKMT-203ENST00000484763 KRTAP5-5Q701N2 237 aaPredicted RBP6.4□□□□□ -1.38
VCPKMT-203ENST00000484763 INE1O15225 51 aa6.37□□□□□ -1.39
VCPKMT-203ENST00000484763 KRTAP5-4Q6L8H1 288 aa6.23□□□□□ -1.41
VCPKMT-203ENST00000484763 MT1AP04731 61 aa6.22□□□□□ -1.41
VCPKMT-203ENST00000484763 LCE4AQ5TA78 99 aa6.18□□□□□ -1.42
VCPKMT-203ENST00000484763 KRTAP6-1Q3LI64 71 aa6.15□□□□□ -1.43
VCPKMT-203ENST00000484763 MT4P47944 62 aa6.03□□□□□ -1.44
VCPKMT-203ENST00000484763 SYNE1Q8NF91 8797 aaKnown RBP6.03□□□□□ -1.44
VCPKMT-203ENST00000484763 KRTAP12-4P60329 112 aa6.02□□□□□ -1.45
VCPKMT-203ENST00000484763 KRTAP4-9Q9BYQ8 210 aa6.01□□□□□ -1.45
VCPKMT-203ENST00000484763 LCE1DQ5T752 114 aa5.97□□□□□ -1.45
VCPKMT-203ENST00000484763 KRTAP4-6Q9BYQ5 205 aa5.94□□□□□ -1.46
VCPKMT-203ENST00000484763 KRTAP9-4Q9BYQ2 154 aa5.92□□□□□ -1.46
VCPKMT-203ENST00000484763 HMCN1Q96RW7 5635 aa5.88□□□□□ -1.47
VCPKMT-203ENST00000484763 KRTAP20-2Q3LI61 65 aa5.83□□□□□ -1.48
VCPKMT-203ENST00000484763 KRTAP6-2Q3LI66 62 aa5.71□□□□□ -1.5
VCPKMT-203ENST00000484763 MT3P25713 68 aa5.64□□□□□ -1.51
VCPKMT-203ENST00000484763 KRTAP5-3Q6L8H2 238 aa5.62□□□□□ -1.51
VCPKMT-203ENST00000484763 KRTAP5-2Q701N4 177 aa5.61□□□□□ -1.51
VCPKMT-203ENST00000484763 AHNAK2Q8IVF2 5795 aa5.31□□□□□ -1.56
VCPKMT-203ENST00000484763 LCE3DQ9BYE3 92 aa5.27□□□□□ -1.57
VCPKMT-203ENST00000484763 OBSCNQ5VST9 7968 aa5.16□□□□□ -1.58
VCPKMT-203ENST00000484763 KRTAP4-11Q9BYQ6 195 aa5.11□□□□□ -1.59
VCPKMT-203ENST00000484763 LCE3EQ5T5B0 92 aa5.1□□□□□ -1.59
VCPKMT-203ENST00000484763 KRTAP5-10Q6L8G5 202 aa5.09□□□□□ -1.59
VCPKMT-203ENST00000484763 GPR98Q8WXG9 6306 aa4.97□□□□□ -1.61
VCPKMT-203ENST00000484763 LCE1EQ5T753 118 aa4.97□□□□□ -1.61
VCPKMT-203ENST00000484763 KRTAP5-8O75690 187 aa4.92□□□□□ -1.62
VCPKMT-203ENST00000484763 KRTAP5-1Q6L8H4 278 aa4.88□□□□□ -1.63
VCPKMT-203ENST00000484763 KRTAP9-9Q9BYP9 154 aa4.88□□□□□ -1.63
VCPKMT-203ENST00000484763 KRTAP4-12Q9BQ66 201 aa4.81□□□□□ -1.64
VCPKMT-203ENST00000484763 KRTAP5-7Q6L8G8 165 aa4.76□□□□□ -1.65
VCPKMT-203ENST00000484763 MUC5ACP98088 5654 aa4.72□□□□□ -1.65
VCPKMT-203ENST00000484763 LCE1BQ5T7P3 118 aa4.64□□□□□ -1.67
VCPKMT-203ENST00000484763 KRTAP4-2Q9BYR5 136 aa4.62□□□□□ -1.67
VCPKMT-203ENST00000484763 LCE1CQ5T751 118 aa4.62□□□□□ -1.67
VCPKMT-203ENST00000484763 PRM1P04553 51 aa4.33□□□□□ -1.72
VCPKMT-203ENST00000484763 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.31□□□□□ -1.72
VCPKMT-203ENST00000484763 MUC5BQ9HC84 5762 aaPredicted RBP4.27□□□□□ -1.73
VCPKMT-203ENST00000484763 KRTAP5-11Q6L8G4 156 aa4.11□□□□□ -1.75
VCPKMT-203ENST00000484763 AHNAKQ09666 5890 aaKnown RBP4.08□□□□□ -1.76
VCPKMT-203ENST00000484763 KRTAP21-2Q3LI59 83 aa4.03□□□□□ -1.76
VCPKMT-203ENST00000484763 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
VCPKMT-203ENST00000484763 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
VCPKMT-203ENST00000484763 PHGR1C9JFL3 82 aa3.52□□□□□ -1.85
VCPKMT-203ENST00000484763 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
VCPKMT-203ENST00000484763 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
VCPKMT-203ENST00000484763 MUC16Q8WXI7 14507 aa2.23□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 42.7 ms