RNA–Protein interactions for RNA: ENST00000484604.5

TPT1-206, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 2

Gene TPT1, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-206ENST00000484604 BRK1Q8WUW1 75 aa3.34□□□□□ -1.87
TPT1-206ENST00000484604 MT1XP80297 61 aa3.32□□□□□ -1.88
TPT1-206ENST00000484604 A0A0A0MQY5 61 aa3.29□□□□□ -1.88
TPT1-206ENST00000484604 KRTAP9-6A8MVA2 160 aa3.29□□□□□ -1.88
TPT1-206ENST00000484604 FCGBPQ9Y6R7 5405 aaPredicted RBP3.28□□□□□ -1.88
TPT1-206ENST00000484604 C10orf95Q9H7T3 257 aa3.22□□□□□ -1.89
TPT1-206ENST00000484604 TNP1P09430 55 aa3.2□□□□□ -1.9
TPT1-206ENST00000484604 ROMO1P60602 79 aa3.19□□□□□ -1.9
TPT1-206ENST00000484604 MACF1Q9UPN3 7388 aaKnown RBP3.18□□□□□ -1.9
TPT1-206ENST00000484604 KRTAP10-12P60413 245 aa3.16□□□□□ -1.9
TPT1-206ENST00000484604 PRO0628Q9UI54 55 aa3.16□□□□□ -1.9
TPT1-206ENST00000484604 KRTAP25-1Q3LHN0 102 aa3.15□□□□□ -1.91
TPT1-206ENST00000484604 KMT2DO14686 5537 aa3.15□□□□□ -1.91
TPT1-206ENST00000484604 PMAIP1Q13794 54 aa3.14□□□□□ -1.91
TPT1-206ENST00000484604 SYNE2Q8WXH0 6885 aaKnown RBP3.12□□□□□ -1.91
TPT1-206ENST00000484604 KRTAP8-1Q8IUC2 63 aa3.1□□□□□ -1.91
TPT1-206ENST00000484604 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
TPT1-206ENST00000484604 OBSCNQ5VST9 7968 aa3.07□□□□□ -1.92
TPT1-206ENST00000484604 LCE3AQ5TA76 89 aa3.06□□□□□ -1.92
TPT1-206ENST00000484604 KRTAP6-3Q3LI67 103 aa3.02□□□□□ -1.93
TPT1-206ENST00000484604 PP632Q6XCG6 107 aa3.02□□□□□ -1.93
TPT1-206ENST00000484604 SPRR2FQ96RM1 72 aa3.02□□□□□ -1.93
TPT1-206ENST00000484604 KRTAP4-3Q9BYR4 195 aa3.02□□□□□ -1.93
TPT1-206ENST00000484604 MUC12Q9UKN1 5478 aa2.99□□□□□ -1.93
TPT1-206ENST00000484604 KRTAP19-5Q3LI72 72 aa2.98□□□□□ -1.93
TPT1-206ENST00000484604 KTN1-AS1Q86SY8 53 aa2.97□□□□□ -1.93
TPT1-206ENST00000484604 KRTAP19-7Q3SYF9 63 aa2.96□□□□□ -1.94
TPT1-206ENST00000484604 KRTAP12-3P60328 96 aa2.95□□□□□ -1.94
TPT1-206ENST00000484604 MDN1Q9NU22 5596 aa2.94□□□□□ -1.94
TPT1-206ENST00000484604 PRAC1Q96KF2 57 aa2.94□□□□□ -1.94
TPT1-206ENST00000484604 MT1EP04732 61 aa2.93□□□□□ -1.94
TPT1-206ENST00000484604 LCE3CQ5T5A8 94 aa2.91□□□□□ -1.94
TPT1-206ENST00000484604 SPRR2EP22531 72 aa2.9□□□□□ -1.95
TPT1-206ENST00000484604 SPRR2BP35325 72 aa2.9□□□□□ -1.95
TPT1-206ENST00000484604 SPRR2AP35326 72 aa2.9□□□□□ -1.95
TPT1-206ENST00000484604 KRTAP5-2Q701N4 177 aa2.88□□□□□ -1.95
TPT1-206ENST00000484604 NEBP20929 6669 aa2.87□□□□□ -1.95
TPT1-206ENST00000484604 KRTAP19-3Q7Z4W3 81 aa2.86□□□□□ -1.95
TPT1-206ENST00000484604 MT1LQ93083 61 aa2.85□□□□□ -1.95
TPT1-206ENST00000484604 MT1GP13640 62 aa2.81□□□□□ -1.96
TPT1-206ENST00000484604 SPRR2DP22532 72 aa2.8□□□□□ -1.96
TPT1-206ENST00000484604 MT1MQ8N339 61 aa2.77□□□□□ -1.97
TPT1-206ENST00000484604 NDUFAF8A1L188 74 aa2.69□□□□□ -1.98
TPT1-206ENST00000484604 KRTAP20-1Q3LI63 56 aa2.69□□□□□ -1.98
TPT1-206ENST00000484604 DSTQ03001 7570 aaKnown RBP2.68□□□□□ -1.98
TPT1-206ENST00000484604 KRTAP2-3P0C7H8 128 aa2.67□□□□□ -1.98
TPT1-206ENST00000484604 KRTAP2-4Q9BYR9 128 aa2.67□□□□□ -1.98
TPT1-206ENST00000484604 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
TPT1-206ENST00000484604 KRTAP2-1Q9BYU5 128 aa2.61□□□□□ -1.99
TPT1-206ENST00000484604 SPRR5A0A1B0GTR4 108 aa2.56□□□□□ -2
TPT1-206ENST00000484604 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
TPT1-206ENST00000484604 LUZP6Q538Z0 58 aa2.49□□□□□ -2.01
TPT1-206ENST00000484604 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
TPT1-206ENST00000484604 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
TPT1-206ENST00000484604 MT1AP04731 61 aa2.43□□□□□ -2.02
TPT1-206ENST00000484604 MT4P47944 62 aa2.43□□□□□ -2.02
TPT1-206ENST00000484604 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
TPT1-206ENST00000484604 SYNE1Q8NF91 8797 aaKnown RBP2.41□□□□□ -2.02
TPT1-206ENST00000484604 KRTAP12-4P60329 112 aa2.4□□□□□ -2.03
TPT1-206ENST00000484604 KRTAP6-1Q3LI64 71 aa2.4□□□□□ -2.03
TPT1-206ENST00000484604 HMCN1Q96RW7 5635 aa2.36□□□□□ -2.03
TPT1-206ENST00000484604 KRTAP20-2Q3LI61 65 aa2.32□□□□□ -2.04
TPT1-206ENST00000484604 KRTAP6-2Q3LI66 62 aa2.24□□□□□ -2.05
TPT1-206ENST00000484604 AHNAK2Q8IVF2 5795 aa2.15□□□□□ -2.06
TPT1-206ENST00000484604 GPR98Q8WXG9 6306 aa2.1□□□□□ -2.07
TPT1-206ENST00000484604 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
TPT1-206ENST00000484604 KRTAP5-10Q6L8G5 202 aa2.06□□□□□ -2.08
TPT1-206ENST00000484604 LCE3DQ9BYE3 92 aa2.06□□□□□ -2.08
TPT1-206ENST00000484604 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
TPT1-206ENST00000484604 MUC5ACP98088 5654 aa1.89□□□□□ -2.11
TPT1-206ENST00000484604 INE1O15225 51 aa1.88□□□□□ -2.11
TPT1-206ENST00000484604 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
TPT1-206ENST00000484604 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
TPT1-206ENST00000484604 AHNAKQ09666 5890 aaKnown RBP1.68□□□□□ -2.14
TPT1-206ENST00000484604 PRM1P04553 51 aa1.65□□□□□ -2.15
TPT1-206ENST00000484604 PHGR1C9JFL3 82 aa1.38□□□□□ -2.19
TPT1-206ENST00000484604 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
TPT1-206ENST00000484604 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 81.5 ms