RNA–Protein interactions for RNA: ENST00000484552.5

CAST-210, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-210ENST00000484552 KRTAP5-9P26371 169 aa3.1□□□□□ -1.91
CAST-210ENST00000484552 KRTAP19-2Q3LHN2 52 aa3.1□□□□□ -1.91
CAST-210ENST00000484552 MT1HP80294 61 aa3.07□□□□□ -1.92
CAST-210ENST00000484552 KRTAP5-4Q6L8H1 288 aa3.07□□□□□ -1.92
CAST-210ENST00000484552 TNP1P09430 55 aa3.05□□□□□ -1.92
CAST-210ENST00000484552 CRCT1Q9UGL9 99 aa3.05□□□□□ -1.92
CAST-210ENST00000484552 FLGP20930 4061 aaPredicted RBP3.04□□□□□ -1.92
CAST-210ENST00000484552 LCE3CQ5T5A8 94 aa3.02□□□□□ -1.93
CAST-210ENST00000484552 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
CAST-210ENST00000484552 M0R2T5 61 aa2.97□□□□□ -1.93
CAST-210ENST00000484552 USH2AO75445 5202 aa2.96□□□□□ -1.94
CAST-210ENST00000484552 SSPOA2VEC9 5147 aa2.92□□□□□ -1.94
CAST-210ENST00000484552 KRTAP10-12P60413 245 aa2.9□□□□□ -1.94
CAST-210ENST00000484552 FCGBPQ9Y6R7 5405 aaPredicted RBP2.88□□□□□ -1.95
CAST-210ENST00000484552 MACF1Q9UPN3 7388 aaKnown RBP2.86□□□□□ -1.95
CAST-210ENST00000484552 SYNE2Q8WXH0 6885 aaKnown RBP2.85□□□□□ -1.95
CAST-210ENST00000484552 MT2AP02795 61 aa2.84□□□□□ -1.95
CAST-210ENST00000484552 MT1FP04733 61 aa2.82□□□□□ -1.96
CAST-210ENST00000484552 KRTAP2-3P0C7H8 128 aa2.81□□□□□ -1.96
CAST-210ENST00000484552 SPRR2GQ9BYE4 73 aa2.81□□□□□ -1.96
CAST-210ENST00000484552 KRTAP2-4Q9BYR9 128 aa2.81□□□□□ -1.96
CAST-210ENST00000484552 KRTAP2-1Q9BYU5 128 aa2.81□□□□□ -1.96
CAST-210ENST00000484552 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
CAST-210ENST00000484552 KRTAP10-5P60370 271 aa2.75□□□□□ -1.97
CAST-210ENST00000484552 KRTAP19-6Q3LI70 58 aa2.74□□□□□ -1.97
CAST-210ENST00000484552 KRTAP12-3P60328 96 aa2.72□□□□□ -1.97
CAST-210ENST00000484552 KRTAP19-8Q3LI54 63 aa2.72□□□□□ -1.97
CAST-210ENST00000484552 NEBP20929 6669 aa2.68□□□□□ -1.98
CAST-210ENST00000484552 KRTAP8-1Q8IUC2 63 aa2.67□□□□□ -1.98
CAST-210ENST00000484552 MT1BP07438 61 aa2.66□□□□□ -1.98
CAST-210ENST00000484552 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
CAST-210ENST00000484552 MUC12Q9UKN1 5478 aa2.64□□□□□ -1.99
CAST-210ENST00000484552 KRTAP9-6A8MVA2 160 aa2.64□□□□□ -1.99
CAST-210ENST00000484552 KRTAP4-3Q9BYR4 195 aa2.63□□□□□ -1.99
CAST-210ENST00000484552 OBSCNQ5VST9 7968 aa2.61□□□□□ -1.99
CAST-210ENST00000484552 MT1XP80297 61 aa2.6□□□□□ -1.99
CAST-210ENST00000484552 MDN1Q9NU22 5596 aa2.59□□□□□ -1.99
CAST-210ENST00000484552 KRTAP5-2Q701N4 177 aa2.59□□□□□ -2
CAST-210ENST00000484552 HMCN1Q96RW7 5635 aa2.56□□□□□ -2
CAST-210ENST00000484552 KMT2DO14686 5537 aa2.56□□□□□ -2
CAST-210ENST00000484552 LCE3AQ5TA76 89 aa2.55□□□□□ -2
CAST-210ENST00000484552 KRTAP20-1Q3LI63 56 aa2.47□□□□□ -2.01
CAST-210ENST00000484552 PRM1P04553 51 aa2.43□□□□□ -2.02
CAST-210ENST00000484552 SPRR2FQ96RM1 72 aa2.38□□□□□ -2.03
CAST-210ENST00000484552 KRTAP19-5Q3LI72 72 aa2.38□□□□□ -2.03
CAST-210ENST00000484552 SPRR2EP22531 72 aa2.36□□□□□ -2.03
CAST-210ENST00000484552 SPRR2BP35325 72 aa2.36□□□□□ -2.03
CAST-210ENST00000484552 SPRR2AP35326 72 aa2.36□□□□□ -2.03
CAST-210ENST00000484552 KRTAP19-7Q3SYF9 63 aa2.32□□□□□ -2.04
CAST-210ENST00000484552 SPRR2DP22532 72 aa2.28□□□□□ -2.04
CAST-210ENST00000484552 DSTQ03001 7570 aaKnown RBP2.28□□□□□ -2.04
CAST-210ENST00000484552 MT1EP04732 61 aa2.27□□□□□ -2.05
CAST-210ENST00000484552 MT1LQ93083 61 aa2.25□□□□□ -2.05
CAST-210ENST00000484552 KRTAP5-8O75690 187 aa2.24□□□□□ -2.05
CAST-210ENST00000484552 GPR98Q8WXG9 6306 aa2.24□□□□□ -2.05
CAST-210ENST00000484552 KRTAP5-5Q701N2 237 aaPredicted RBP2.21□□□□□ -2.06
CAST-210ENST00000484552 MT1GP13640 62 aa2.16□□□□□ -2.06
CAST-210ENST00000484552 KRTAP19-3Q7Z4W3 81 aa2.15□□□□□ -2.06
CAST-210ENST00000484552 MT1AP04731 61 aa2.14□□□□□ -2.07
CAST-210ENST00000484552 MT1MQ8N339 61 aa2.13□□□□□ -2.07
CAST-210ENST00000484552 LCE1CQ5T751 118 aa2.05□□□□□ -2.08
CAST-210ENST00000484552 LCE1BQ5T7P3 118 aa2.05□□□□□ -2.08
CAST-210ENST00000484552 AHNAK2Q8IVF2 5795 aa2.05□□□□□ -2.08
CAST-210ENST00000484552 SYNE1Q8NF91 8797 aaKnown RBP2.02□□□□□ -2.09
CAST-210ENST00000484552 MT4P47944 62 aa2□□□□□ -2.09
CAST-210ENST00000484552 KRTAP6-2Q3LI66 62 aa1.99□□□□□ -2.09
CAST-210ENST00000484552 KRTAP5-10Q6L8G5 202 aa1.95□□□□□ -2.1
CAST-210ENST00000484552 KRTAP5-7Q6L8G8 165 aa1.89□□□□□ -2.11
CAST-210ENST00000484552 KRTAP20-2Q3LI61 65 aa1.88□□□□□ -2.11
CAST-210ENST00000484552 KRTAP6-1Q3LI64 71 aa1.88□□□□□ -2.11
CAST-210ENST00000484552 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
CAST-210ENST00000484552 AHNAKQ09666 5890 aaKnown RBP1.73□□□□□ -2.13
CAST-210ENST00000484552 MUC5ACP98088 5654 aa1.72□□□□□ -2.13
CAST-210ENST00000484552 MUC5BQ9HC84 5762 aaPredicted RBP1.71□□□□□ -2.14
CAST-210ENST00000484552 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
CAST-210ENST00000484552 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
CAST-210ENST00000484552 PHGR1C9JFL3 82 aa1.13□□□□□ -2.23
CAST-210ENST00000484552 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 163.5 ms