RNA–Protein interactions for RNA: ENST00000484380.2

ABCD4-212, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 1,823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-212ENST00000484380 SSPOA2VEC9 5147 aa5.33□□□□□ -1.56
ABCD4-212ENST00000484380 KRTAP19-5Q3LI72 72 aa5.3□□□□□ -1.56
ABCD4-212ENST00000484380 LCE1DQ5T752 114 aa5.28□□□□□ -1.56
ABCD4-212ENST00000484380 KRTAP19-6Q3LI70 58 aa5.27□□□□□ -1.57
ABCD4-212ENST00000484380 KRTAP4-8A0A0G2JLE6 195 aa5.22□□□□□ -1.57
ABCD4-212ENST00000484380 CRCT1Q9UGL9 99 aa5.18□□□□□ -1.58
ABCD4-212ENST00000484380 KMT2DO14686 5537 aa5.17□□□□□ -1.58
ABCD4-212ENST00000484380 KRTAP19-7Q3SYF9 63 aa5.16□□□□□ -1.58
ABCD4-212ENST00000484380 LCE3CQ5T5A8 94 aa5.16□□□□□ -1.58
ABCD4-212ENST00000484380 FCGBPQ9Y6R7 5405 aaPredicted RBP5.13□□□□□ -1.59
ABCD4-212ENST00000484380 MT1EP04732 61 aa5.04□□□□□ -1.6
ABCD4-212ENST00000484380 KRTAP4-9Q9BYQ8 210 aa5.02□□□□□ -1.61
ABCD4-212ENST00000484380 MT3P25713 68 aa5□□□□□ -1.61
ABCD4-212ENST00000484380 KRTAP4-11Q9BYQ6 195 aa5□□□□□ -1.61
ABCD4-212ENST00000484380 MT1LQ93083 61 aa5□□□□□ -1.61
ABCD4-212ENST00000484380 KRTAP4-7Q9BYR0 210 aa4.93□□□□□ -1.62
ABCD4-212ENST00000484380 LCE1FQ5T754 118 aa4.92□□□□□ -1.62
ABCD4-212ENST00000484380 KRTAP9-6A8MVA2 160 aa4.91□□□□□ -1.62
ABCD4-212ENST00000484380 MACF1Q9UPN3 7388 aaKnown RBP4.91□□□□□ -1.62
ABCD4-212ENST00000484380 KRTAP2-2Q9BYT5 123 aa4.81□□□□□ -1.64
ABCD4-212ENST00000484380 SYNE2Q8WXH0 6885 aaKnown RBP4.81□□□□□ -1.64
ABCD4-212ENST00000484380 INE1O15225 51 aa4.76□□□□□ -1.65
ABCD4-212ENST00000484380 KRTAP19-3Q7Z4W3 81 aa4.76□□□□□ -1.65
ABCD4-212ENST00000484380 MT1GP13640 62 aa4.74□□□□□ -1.65
ABCD4-212ENST00000484380 KRTAP4-2Q9BYR5 136 aa4.74□□□□□ -1.65
ABCD4-212ENST00000484380 KRTAP2-3P0C7H8 128 aa4.73□□□□□ -1.65
ABCD4-212ENST00000484380 KRTAP2-4Q9BYR9 128 aa4.73□□□□□ -1.65
ABCD4-212ENST00000484380 KRTAP2-1Q9BYU5 128 aa4.73□□□□□ -1.65
ABCD4-212ENST00000484380 SPRR2FQ96RM1 72 aa4.72□□□□□ -1.65
ABCD4-212ENST00000484380 MT1MQ8N339 61 aa4.72□□□□□ -1.65
ABCD4-212ENST00000484380 MUC12Q9UKN1 5478 aa4.66□□□□□ -1.66
ABCD4-212ENST00000484380 KRTAP5-9P26371 169 aa4.65□□□□□ -1.67
ABCD4-212ENST00000484380 KRTAP4-3Q9BYR4 195 aa4.63□□□□□ -1.67
ABCD4-212ENST00000484380 KRTAP6-3Q3LI67 103 aa4.62□□□□□ -1.67
ABCD4-212ENST00000484380 SPRR2EP22531 72 aa4.51□□□□□ -1.69
ABCD4-212ENST00000484380 SPRR2BP35325 72 aa4.51□□□□□ -1.69
ABCD4-212ENST00000484380 SPRR2AP35326 72 aa4.51□□□□□ -1.69
ABCD4-212ENST00000484380 MDN1Q9NU22 5596 aa4.5□□□□□ -1.69
ABCD4-212ENST00000484380 SPRR2DP22532 72 aa4.34□□□□□ -1.71
ABCD4-212ENST00000484380 NEBP20929 6669 aa4.34□□□□□ -1.72
ABCD4-212ENST00000484380 DSTQ03001 7570 aaKnown RBP4.28□□□□□ -1.72
ABCD4-212ENST00000484380 MT1AP04731 61 aa4.25□□□□□ -1.73
ABCD4-212ENST00000484380 KRTAP5-5Q701N2 237 aaPredicted RBP4.24□□□□□ -1.73
ABCD4-212ENST00000484380 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.74
ABCD4-212ENST00000484380 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
ABCD4-212ENST00000484380 KRTAP20-1Q3LI63 56 aa4.11□□□□□ -1.75
ABCD4-212ENST00000484380 KRTAP12-4P60329 112 aa4.05□□□□□ -1.76
ABCD4-212ENST00000484380 KRTAP5-3Q6L8H2 238 aa4.03□□□□□ -1.76
ABCD4-212ENST00000484380 SYNE1Q8NF91 8797 aaKnown RBP3.97□□□□□ -1.77
ABCD4-212ENST00000484380 LCE3DQ9BYE3 92 aa3.93□□□□□ -1.78
ABCD4-212ENST00000484380 KRTAP5-4Q6L8H1 288 aa3.86□□□□□ -1.79
ABCD4-212ENST00000484380 MT4P47944 62 aa3.8□□□□□ -1.8
ABCD4-212ENST00000484380 KRTAP6-2Q3LI66 62 aa3.79□□□□□ -1.8
ABCD4-212ENST00000484380 LCE1EQ5T753 118 aa3.73□□□□□ -1.81
ABCD4-212ENST00000484380 HMCN1Q96RW7 5635 aa3.64□□□□□ -1.83
ABCD4-212ENST00000484380 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
ABCD4-212ENST00000484380 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
ABCD4-212ENST00000484380 PRM1P04553 51 aa3.56□□□□□ -1.84
ABCD4-212ENST00000484380 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
ABCD4-212ENST00000484380 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
ABCD4-212ENST00000484380 GPR98Q8WXG9 6306 aa3.35□□□□□ -1.87
ABCD4-212ENST00000484380 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
ABCD4-212ENST00000484380 KRTAP5-10Q6L8G5 202 aa3.18□□□□□ -1.9
ABCD4-212ENST00000484380 MUC5ACP98088 5654 aa3.15□□□□□ -1.91
ABCD4-212ENST00000484380 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
ABCD4-212ENST00000484380 KRTAP5-7Q6L8G8 165 aa3.05□□□□□ -1.92
ABCD4-212ENST00000484380 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
ABCD4-212ENST00000484380 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
ABCD4-212ENST00000484380 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
ABCD4-212ENST00000484380 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.88□□□□□ -1.95
ABCD4-212ENST00000484380 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
ABCD4-212ENST00000484380 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
ABCD4-212ENST00000484380 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
ABCD4-212ENST00000484380 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
ABCD4-212ENST00000484380 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
ABCD4-212ENST00000484380 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
ABCD4-212ENST00000484380 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
ABCD4-212ENST00000484380 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 14 ms