RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 MT1BP07438 61 aa3.04□□□□□ -1.92
SHROOM3-206ENST00000484236 KRTAP10-5P60370 271 aa2.99□□□□□ -1.93
SHROOM3-206ENST00000484236 MT1XP80297 61 aa2.99□□□□□ -1.93
SHROOM3-206ENST00000484236 NDUFAF8A1L188 74 aa2.98□□□□□ -1.93
SHROOM3-206ENST00000484236 PRO2289Q9P1D8 64 aa2.98□□□□□ -1.93
SHROOM3-206ENST00000484236 LCE3AQ5TA76 89 aa2.96□□□□□ -1.94
SHROOM3-206ENST00000484236 KRTAP8-1Q8IUC2 63 aa2.96□□□□□ -1.94
SHROOM3-206ENST00000484236 KRTAP2-2Q9BYT5 123 aa2.96□□□□□ -1.94
SHROOM3-206ENST00000484236 LUZP6Q538Z0 58 aa2.95□□□□□ -1.94
SHROOM3-206ENST00000484236 SPRR5A0A1B0GTR4 108 aa2.94□□□□□ -1.94
SHROOM3-206ENST00000484236 KRTAP10-12P60413 245 aa2.92□□□□□ -1.94
SHROOM3-206ENST00000484236 KRTAP12-3P60328 96 aa2.86□□□□□ -1.95
SHROOM3-206ENST00000484236 KRTAP19-5Q3LI72 72 aa2.75□□□□□ -1.97
SHROOM3-206ENST00000484236 A0A0A0MQY5 61 aa2.73□□□□□ -1.97
SHROOM3-206ENST00000484236 KRTAP19-6Q3LI70 58 aa2.71□□□□□ -1.98
SHROOM3-206ENST00000484236 LCE3CQ5T5A8 94 aa2.69□□□□□ -1.98
SHROOM3-206ENST00000484236 OBSCNQ5VST9 7968 aa2.68□□□□□ -1.98
SHROOM3-206ENST00000484236 KRTAP19-7Q3SYF9 63 aa2.67□□□□□ -1.98
SHROOM3-206ENST00000484236 USH2AO75445 5202 aa2.66□□□□□ -1.98
SHROOM3-206ENST00000484236 KRTAP4-3Q9BYR4 195 aa2.66□□□□□ -1.98
SHROOM3-206ENST00000484236 KRTAP9-6A8MVA2 160 aa2.65□□□□□ -1.99
SHROOM3-206ENST00000484236 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
SHROOM3-206ENST00000484236 SSPOA2VEC9 5147 aa2.62□□□□□ -1.99
SHROOM3-206ENST00000484236 MT1EP04732 61 aa2.61□□□□□ -1.99
SHROOM3-206ENST00000484236 MT1LQ93083 61 aa2.59□□□□□ -1.99
SHROOM3-206ENST00000484236 INE1O15225 51 aa2.53□□□□□ -2
SHROOM3-206ENST00000484236 KMT2DO14686 5537 aa2.5□□□□□ -2.01
SHROOM3-206ENST00000484236 MT1GP13640 62 aa2.49□□□□□ -2.01
SHROOM3-206ENST00000484236 KRTAP19-3Q7Z4W3 81 aa2.48□□□□□ -2.01
SHROOM3-206ENST00000484236 KRTAP2-3P0C7H8 128 aa2.47□□□□□ -2.01
SHROOM3-206ENST00000484236 KRTAP2-4Q9BYR9 128 aa2.47□□□□□ -2.01
SHROOM3-206ENST00000484236 KRTAP2-1Q9BYU5 128 aa2.47□□□□□ -2.01
SHROOM3-206ENST00000484236 MT1MQ8N339 61 aa2.45□□□□□ -2.02
SHROOM3-206ENST00000484236 SPRR2FQ96RM1 72 aa2.4□□□□□ -2.03
SHROOM3-206ENST00000484236 FCGBPQ9Y6R7 5405 aaPredicted RBP2.39□□□□□ -2.03
SHROOM3-206ENST00000484236 CRCT1Q9UGL9 99 aa2.37□□□□□ -2.03
SHROOM3-206ENST00000484236 FSIP2Q5CZC0 6907 aa2.35□□□□□ -2.03
SHROOM3-206ENST00000484236 MT3P25713 68 aa2.33□□□□□ -2.04
SHROOM3-206ENST00000484236 MUC12Q9UKN1 5478 aa2.26□□□□□ -2.05
SHROOM3-206ENST00000484236 KRTAP5-8O75690 187 aa2.25□□□□□ -2.05
SHROOM3-206ENST00000484236 MACF1Q9UPN3 7388 aaKnown RBP2.24□□□□□ -2.05
SHROOM3-206ENST00000484236 SPRR2EP22531 72 aa2.23□□□□□ -2.05
SHROOM3-206ENST00000484236 SPRR2BP35325 72 aa2.23□□□□□ -2.05
SHROOM3-206ENST00000484236 SPRR2AP35326 72 aa2.23□□□□□ -2.05
SHROOM3-206ENST00000484236 MT1AP04731 61 aa2.22□□□□□ -2.05
SHROOM3-206ENST00000484236 KRTAP6-3Q3LI67 103 aa2.2□□□□□ -2.06
SHROOM3-206ENST00000484236 KRTAP5-5Q701N2 237 aaPredicted RBP2.2□□□□□ -2.06
SHROOM3-206ENST00000484236 KRTAP6-1Q3LI64 71 aa2.17□□□□□ -2.06
SHROOM3-206ENST00000484236 SPRR2DP22532 72 aa2.15□□□□□ -2.07
SHROOM3-206ENST00000484236 KRTAP12-4P60329 112 aa2.11□□□□□ -2.07
SHROOM3-206ENST00000484236 SYNE2Q8WXH0 6885 aaKnown RBP2.1□□□□□ -2.07
SHROOM3-206ENST00000484236 LCE1FQ5T754 118 aa2.09□□□□□ -2.07
SHROOM3-206ENST00000484236 DSTQ03001 7570 aaKnown RBP2.06□□□□□ -2.08
SHROOM3-206ENST00000484236 LCE3DQ9BYE3 92 aa2.06□□□□□ -2.08
SHROOM3-206ENST00000484236 SYNE1Q8NF91 8797 aaKnown RBP2.05□□□□□ -2.08
SHROOM3-206ENST00000484236 LCE3EQ5T5B0 92 aa2.03□□□□□ -2.08
SHROOM3-206ENST00000484236 MDN1Q9NU22 5596 aa2.03□□□□□ -2.09
SHROOM3-206ENST00000484236 LCE1CQ5T751 118 aa1.97□□□□□ -2.09
SHROOM3-206ENST00000484236 LCE1BQ5T7P3 118 aa1.97□□□□□ -2.09
SHROOM3-206ENST00000484236 KRTAP6-2Q3LI66 62 aa1.96□□□□□ -2.1
SHROOM3-206ENST00000484236 NEBP20929 6669 aa1.92□□□□□ -2.1
SHROOM3-206ENST00000484236 KRTAP20-2Q3LI61 65 aa1.85□□□□□ -2.11
SHROOM3-206ENST00000484236 PRM1P04553 51 aa1.84□□□□□ -2.11
SHROOM3-206ENST00000484236 MT4P47944 62 aa1.83□□□□□ -2.12
SHROOM3-206ENST00000484236 KRTAP20-1Q3LI63 56 aa1.82□□□□□ -2.12
SHROOM3-206ENST00000484236 MUC19Q7Z5P9 8384 aa1.7□□□□□ -2.14
SHROOM3-206ENST00000484236 HMCN1Q96RW7 5635 aa1.68□□□□□ -2.14
SHROOM3-206ENST00000484236 KRTAP5-10Q6L8G5 202 aa1.59□□□□□ -2.15
SHROOM3-206ENST00000484236 KRTAP5-7Q6L8G8 165 aa1.59□□□□□ -2.15
SHROOM3-206ENST00000484236 MUC5ACP98088 5654 aa1.53□□□□□ -2.16
SHROOM3-206ENST00000484236 KRTAP21-2Q3LI59 83 aa1.46□□□□□ -2.18
SHROOM3-206ENST00000484236 AHNAK2Q8IVF2 5795 aa1.38□□□□□ -2.19
SHROOM3-206ENST00000484236 MUC5BQ9HC84 5762 aaPredicted RBP1.2□□□□□ -2.22
SHROOM3-206ENST00000484236 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
SHROOM3-206ENST00000484236 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
SHROOM3-206ENST00000484236 GPR98Q8WXG9 6306 aa1.16□□□□□ -2.22
SHROOM3-206ENST00000484236 AHNAKQ09666 5890 aaKnown RBP0.94□□□□□ -2.26
SHROOM3-206ENST00000484236 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 58.2 ms