RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 FAT3Q8TDW7 4589 aa0.4□□□□□ -2.34
ITGB1-213ENST00000484088 UBR4Q5T4S7 5183 aa0.4□□□□□ -2.35
ITGB1-213ENST00000484088 LPAP08519 4548 aa0.4□□□□□ -2.35
ITGB1-213ENST00000484088 LAMA2P24043 3122 aaKnown RBP0.4□□□□□ -2.35
ITGB1-213ENST00000484088 ADGRG4Q8IZF6 3080 aa0.4□□□□□ -2.35
ITGB1-213ENST00000484088 PKHD1P08F94 4074 aa0.4□□□□□ -2.35
ITGB1-213ENST00000484088 CSMD2Q7Z408 3487 aa0.4□□□□□ -2.35
ITGB1-213ENST00000484088 MT1EP04732 61 aa0.39□□□□□ -2.35
ITGB1-213ENST00000484088 PLECQ15149 4684 aaKnown RBP0.39□□□□□ -2.35
ITGB1-213ENST00000484088 MYO15AQ9UKN7 3530 aa0.39□□□□□ -2.35
ITGB1-213ENST00000484088 SPRR2FQ96RM1 72 aa0.38□□□□□ -2.35
ITGB1-213ENST00000484088 SPRR2GQ9BYE4 73 aa0.38□□□□□ -2.35
ITGB1-213ENST00000484088 LRP1Q07954 4544 aaKnown RBP0.37□□□□□ -2.35
ITGB1-213ENST00000484088 VCANP13611 3396 aa0.37□□□□□ -2.35
ITGB1-213ENST00000484088 SPRR2EP22531 72 aa0.37□□□□□ -2.35
ITGB1-213ENST00000484088 KRTAP6-2Q3LI66 62 aa0.37□□□□□ -2.35
ITGB1-213ENST00000484088 MT1LQ93083 61 aa0.37□□□□□ -2.35
ITGB1-213ENST00000484088 PCNTO95613 3336 aa0.37□□□□□ -2.35
ITGB1-213ENST00000484088 PCLOQ9Y6V0 5065 aa0.37□□□□□ -2.35
ITGB1-213ENST00000484088 WDFY3Q8IZQ1 3526 aa0.37□□□□□ -2.35
ITGB1-213ENST00000484088 BRCA2P51587 3418 aa0.36□□□□□ -2.35
ITGB1-213ENST00000484088 CENPFP49454 3210 aa0.36□□□□□ -2.35
ITGB1-213ENST00000484088 DYNC1H1Q14204 4646 aaKnown RBP0.36□□□□□ -2.35
ITGB1-213ENST00000484088 MT1HP80294 61 aa0.36□□□□□ -2.35
ITGB1-213ENST00000484088 MUC17Q685J3 4493 aa0.36□□□□□ -2.35
ITGB1-213ENST00000484088 DNAH5Q8TE73 4624 aa0.36□□□□□ -2.35
ITGB1-213ENST00000484088 UNC80Q8N2C7 3258 aa0.36□□□□□ -2.35
ITGB1-213ENST00000484088 DNAH14Q0VDD8 3507 aa0.36□□□□□ -2.35
ITGB1-213ENST00000484088 MACF1Q9UPN3 7388 aaKnown RBP0.36□□□□□ -2.35
ITGB1-213ENST00000484088 SYNE2Q8WXH0 6885 aaKnown RBP0.35□□□□□ -2.35
ITGB1-213ENST00000484088 EYSQ5T1H1 3165 aa0.35□□□□□ -2.35
ITGB1-213ENST00000484088 FAT1Q14517 4588 aa0.35□□□□□ -2.35
ITGB1-213ENST00000484088 KRTAP21-1Q3LI58 79 aa0.35□□□□□ -2.35
ITGB1-213ENST00000484088 KIAA1109Q2LD37 5005 aa0.35□□□□□ -2.35
ITGB1-213ENST00000484088 CDH23Q9H251 3354 aa0.34□□□□□ -2.36
ITGB1-213ENST00000484088 FSIP2Q5CZC0 6907 aa0.32□□□□□ -2.36
ITGB1-213ENST00000484088 NEBP20929 6669 aa0.32□□□□□ -2.36
ITGB1-213ENST00000484088 LRP1BQ9NZR2 4599 aa0.32□□□□□ -2.36
ITGB1-213ENST00000484088 KRTAP19-8Q3LI54 63 aa0.32□□□□□ -2.36
ITGB1-213ENST00000484088 STARD9Q9P2P6 4700 aa0.31□□□□□ -2.36
ITGB1-213ENST00000484088 MT1XP80297 61 aa0.31□□□□□ -2.36
ITGB1-213ENST00000484088 MUC2Q02817 5179 aa0.3□□□□□ -2.36
ITGB1-213ENST00000484088 MUC5ACP98088 5654 aa0.29□□□□□ -2.36
ITGB1-213ENST00000484088 LRP2P98164 4655 aa0.28□□□□□ -2.36
ITGB1-213ENST00000484088 DSTQ03001 7570 aaKnown RBP0.28□□□□□ -2.36
ITGB1-213ENST00000484088 MT2AP02795 61 aa0.28□□□□□ -2.36
ITGB1-213ENST00000484088 MT1GP13640 62 aa0.28□□□□□ -2.36
ITGB1-213ENST00000484088 KMT2CQ8NEZ4 4911 aaKnown RBP0.27□□□□□ -2.37
ITGB1-213ENST00000484088 MT1HL1P0DM35 61 aa0.27□□□□□ -2.37
ITGB1-213ENST00000484088 MT1MQ8N339 61 aa0.27□□□□□ -2.37
ITGB1-213ENST00000484088 MDN1Q9NU22 5596 aa0.27□□□□□ -2.37
ITGB1-213ENST00000484088 HERC1Q15751 4861 aa0.26□□□□□ -2.37
ITGB1-213ENST00000484088 KRTAP19-7Q3SYF9 63 aa0.26□□□□□ -2.37
ITGB1-213ENST00000484088 RYR2Q92736 4967 aa0.26□□□□□ -2.37
ITGB1-213ENST00000484088 KMT2DO14686 5537 aa0.25□□□□□ -2.37
ITGB1-213ENST00000484088 RYR1P21817 5038 aa0.25□□□□□ -2.37
ITGB1-213ENST00000484088 FAT4Q6V0I7 4981 aa0.25□□□□□ -2.37
ITGB1-213ENST00000484088 DNHD1Q96M86 4753 aa0.24□□□□□ -2.37
ITGB1-213ENST00000484088 PHGR1C9JFL3 82 aa0.24□□□□□ -2.37
ITGB1-213ENST00000484088 MT1FP04733 61 aa0.24□□□□□ -2.37
ITGB1-213ENST00000484088 MT1BP07438 61 aa0.24□□□□□ -2.37
ITGB1-213ENST00000484088 KRTAP19-2Q3LHN2 52 aa0.24□□□□□ -2.37
ITGB1-213ENST00000484088 SSPOA2VEC9 5147 aa0.23□□□□□ -2.37
ITGB1-213ENST00000484088 RYR3Q15413 4870 aa0.23□□□□□ -2.37
ITGB1-213ENST00000484088 EPPK1P58107 5090 aaKnown RBP0.23□□□□□ -2.37
ITGB1-213ENST00000484088 ABCA13Q86UQ4 5058 aa0.23□□□□□ -2.37
ITGB1-213ENST00000484088 KRTAP20-1Q3LI63 56 aa0.22□□□□□ -2.37
ITGB1-213ENST00000484088 KRTAP6-1Q3LI64 71 aa0.22□□□□□ -2.37
ITGB1-213ENST00000484088 HERC2O95714 4834 aa0.21□□□□□ -2.38
ITGB1-213ENST00000484088 BIRC6Q9NR09 4857 aa0.19□□□□□ -2.38
ITGB1-213ENST00000484088 HYDINQ4G0P3 5121 aa0.18□□□□□ -2.38
ITGB1-213ENST00000484088 HMCN2Q8NDA2 5059 aa0.17□□□□□ -2.38
ITGB1-213ENST00000484088 RNF213Q63HN8 5207 aa0.16□□□□□ -2.38
ITGB1-213ENST00000484088 USH2AO75445 5202 aa0.15□□□□□ -2.39
ITGB1-213ENST00000484088 MT4P47944 62 aa0.11□□□□□ -2.39
ITGB1-213ENST00000484088 MUC12Q9UKN1 5478 aa0.1□□□□□ -2.39
ITGB1-213ENST00000484088 KRTAP20-2Q3LI61 65 aa0.08□□□□□ -2.4
ITGB1-213ENST00000484088 KRTAP19-6Q3LI70 58 aa0.07□□□□□ -2.4
Retrieved 78 of 20,778 RNA–protein pairs in 139.4 ms