RNA–Protein interactions for RNA: ENST00000483866.1

KDM3A-211, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 449 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-211ENST00000483866 PMAIP1Q13794 54 aa1.97□□□□□ -2.09
KDM3A-211ENST00000483866 A6NN06 94 aa1.96□□□□□ -2.1
KDM3A-211ENST00000483866 MIR22HGQ0VDD5 57 aa1.95□□□□□ -2.1
KDM3A-211ENST00000483866 SPATA8Q6RVD6 105 aa1.95□□□□□ -2.1
KDM3A-211ENST00000483866 LCE3DQ9BYE3 92 aa1.95□□□□□ -2.1
KDM3A-211ENST00000483866 KRTAP19-8Q3LI54 63 aa1.93□□□□□ -2.1
KDM3A-211ENST00000483866 PLAC4Q8WY50 150 aa1.92□□□□□ -2.1
KDM3A-211ENST00000483866 KRTAP13-4Q3LI77 160 aa1.91□□□□□ -2.1
KDM3A-211ENST00000483866 LINC01554Q52M75 96 aa1.9□□□□□ -2.11
KDM3A-211ENST00000483866 KTN1-AS1Q86SY8 53 aa1.89□□□□□ -2.11
KDM3A-211ENST00000483866 A0A0D9SG42 100 aa1.88□□□□□ -2.11
KDM3A-211ENST00000483866 KRTAP12-1P59990 96 aa1.88□□□□□ -2.11
KDM3A-211ENST00000483866 PRO2289Q9P1D8 64 aa1.87□□□□□ -2.11
KDM3A-211ENST00000483866 MT1BP07438 61 aa1.86□□□□□ -2.11
KDM3A-211ENST00000483866 LCE3AQ5TA76 89 aa1.86□□□□□ -2.11
KDM3A-211ENST00000483866 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
KDM3A-211ENST00000483866 KRTAP19-6Q3LI70 58 aa1.83□□□□□ -2.12
KDM3A-211ENST00000483866 PP632Q6XCG6 107 aa1.82□□□□□ -2.12
KDM3A-211ENST00000483866 TNP1P09430 55 aa1.79□□□□□ -2.12
KDM3A-211ENST00000483866 ROMO1P60602 79 aa1.79□□□□□ -2.12
KDM3A-211ENST00000483866 MT1XP80297 61 aa1.79□□□□□ -2.12
KDM3A-211ENST00000483866 CRCT1Q9UGL9 99 aa1.79□□□□□ -2.12
KDM3A-211ENST00000483866 C10orf95Q9H7T3 257 aa1.77□□□□□ -2.13
KDM3A-211ENST00000483866 FSIP2Q5CZC0 6907 aa1.76□□□□□ -2.13
KDM3A-211ENST00000483866 USH2AO75445 5202 aa1.75□□□□□ -2.13
KDM3A-211ENST00000483866 SSPOA2VEC9 5147 aa1.73□□□□□ -2.13
KDM3A-211ENST00000483866 KRTAP5-5Q701N2 237 aaPredicted RBP1.7□□□□□ -2.14
KDM3A-211ENST00000483866 FCGBPQ9Y6R7 5405 aaPredicted RBP1.68□□□□□ -2.14
KDM3A-211ENST00000483866 KRTAP8-1Q8IUC2 63 aa1.66□□□□□ -2.14
KDM3A-211ENST00000483866 MACF1Q9UPN3 7388 aaKnown RBP1.65□□□□□ -2.14
KDM3A-211ENST00000483866 KRTAP6-3Q3LI67 103 aa1.65□□□□□ -2.15
KDM3A-211ENST00000483866 LCE1CQ5T751 118 aa1.63□□□□□ -2.15
KDM3A-211ENST00000483866 LCE1BQ5T7P3 118 aa1.63□□□□□ -2.15
KDM3A-211ENST00000483866 KRTAP12-3P60328 96 aa1.62□□□□□ -2.15
KDM3A-211ENST00000483866 KRTAP19-5Q3LI72 72 aa1.6□□□□□ -2.15
KDM3A-211ENST00000483866 KRTAP19-7Q3SYF9 63 aa1.6□□□□□ -2.15
KDM3A-211ENST00000483866 SPRR2FQ96RM1 72 aa1.59□□□□□ -2.15
KDM3A-211ENST00000483866 SYNE2Q8WXH0 6885 aaKnown RBP1.59□□□□□ -2.16
KDM3A-211ENST00000483866 MT1EP04732 61 aa1.58□□□□□ -2.16
KDM3A-211ENST00000483866 MT1GP13640 62 aa1.57□□□□□ -2.16
KDM3A-211ENST00000483866 KMT2DO14686 5537 aa1.56□□□□□ -2.16
KDM3A-211ENST00000483866 KRTAP19-3Q7Z4W3 81 aa1.55□□□□□ -2.16
KDM3A-211ENST00000483866 MT1LQ93083 61 aa1.54□□□□□ -2.16
KDM3A-211ENST00000483866 SPRR2EP22531 72 aa1.53□□□□□ -2.16
KDM3A-211ENST00000483866 SPRR2BP35325 72 aa1.53□□□□□ -2.16
KDM3A-211ENST00000483866 SPRR2AP35326 72 aa1.53□□□□□ -2.16
KDM3A-211ENST00000483866 MT1MQ8N339 61 aa1.49□□□□□ -2.17
KDM3A-211ENST00000483866 NEBP20929 6669 aa1.49□□□□□ -2.17
KDM3A-211ENST00000483866 SPRR2DP22532 72 aa1.48□□□□□ -2.17
KDM3A-211ENST00000483866 KRTAP12-4P60329 112 aa1.47□□□□□ -2.17
KDM3A-211ENST00000483866 MUC12Q9UKN1 5478 aa1.47□□□□□ -2.17
KDM3A-211ENST00000483866 MUC19Q7Z5P9 8384 aa1.47□□□□□ -2.17
KDM3A-211ENST00000483866 KRTAP2-3P0C7H8 128 aa1.45□□□□□ -2.18
KDM3A-211ENST00000483866 KRTAP2-4Q9BYR9 128 aa1.45□□□□□ -2.18
KDM3A-211ENST00000483866 MDN1Q9NU22 5596 aa1.42□□□□□ -2.18
KDM3A-211ENST00000483866 KRTAP2-1Q9BYU5 128 aa1.42□□□□□ -2.18
KDM3A-211ENST00000483866 DSTQ03001 7570 aaKnown RBP1.42□□□□□ -2.18
KDM3A-211ENST00000483866 HMCN1Q96RW7 5635 aa1.41□□□□□ -2.18
KDM3A-211ENST00000483866 KRTAP20-1Q3LI63 56 aa1.41□□□□□ -2.18
KDM3A-211ENST00000483866 INE1O15225 51 aa1.36□□□□□ -2.19
KDM3A-211ENST00000483866 MT1AP04731 61 aa1.33□□□□□ -2.2
KDM3A-211ENST00000483866 KRTAP5-7Q6L8G8 165 aa1.32□□□□□ -2.2
KDM3A-211ENST00000483866 SYNE1Q8NF91 8797 aaKnown RBP1.29□□□□□ -2.2
KDM3A-211ENST00000483866 KRTAP6-1Q3LI64 71 aa1.28□□□□□ -2.2
KDM3A-211ENST00000483866 MT4P47944 62 aa1.25□□□□□ -2.21
KDM3A-211ENST00000483866 KRTAP20-2Q3LI61 65 aa1.24□□□□□ -2.21
KDM3A-211ENST00000483866 KRTAP21-2Q3LI59 83 aa1.21□□□□□ -2.22
KDM3A-211ENST00000483866 KRTAP6-2Q3LI66 62 aa1.19□□□□□ -2.22
KDM3A-211ENST00000483866 AHNAK2Q8IVF2 5795 aa1.09□□□□□ -2.23
KDM3A-211ENST00000483866 KRTAP5-10Q6L8G5 202 aa1.08□□□□□ -2.24
KDM3A-211ENST00000483866 GPR98Q8WXG9 6306 aa1.03□□□□□ -2.24
KDM3A-211ENST00000483866 MUC5ACP98088 5654 aa0.92□□□□□ -2.26
KDM3A-211ENST00000483866 PRM1P04553 51 aa0.91□□□□□ -2.26
KDM3A-211ENST00000483866 MUC5BQ9HC84 5762 aaPredicted RBP0.88□□□□□ -2.27
KDM3A-211ENST00000483866 AHNAKQ09666 5890 aaKnown RBP0.83□□□□□ -2.28
KDM3A-211ENST00000483866 PHGR1C9JFL3 82 aa0.76□□□□□ -2.29
KDM3A-211ENST00000483866 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.31
KDM3A-211ENST00000483866 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 155.3 ms