RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 A0A1B0GU69 56 aa6.27□□□□□ -1.41
ATG4B-221ENST00000483778 KRTAP5-4Q6L8H1 288 aa6.26□□□□□ -1.41
ATG4B-221ENST00000483778 KRTAP4-6Q9BYQ5 205 aa6.24□□□□□ -1.41
ATG4B-221ENST00000483778 PCP4P48539 62 aa6.21□□□□□ -1.42
ATG4B-221ENST00000483778 AHNAK2Q8IVF2 5795 aa6.19□□□□□ -1.42
ATG4B-221ENST00000483778 SMIM26A0A096LP01 95 aa6.19□□□□□ -1.42
ATG4B-221ENST00000483778 PRR15LQ9BU68 103 aa6.19□□□□□ -1.42
ATG4B-221ENST00000483778 LINC01558Q9Y6Z2 57 aa6.19□□□□□ -1.42
ATG4B-221ENST00000483778 KRTAP4-7Q9BYR0 210 aa6.17□□□□□ -1.42
ATG4B-221ENST00000483778 TNP1P09430 55 aa6.15□□□□□ -1.42
ATG4B-221ENST00000483778 KRTAP5-10Q6L8G5 202 aa6.14□□□□□ -1.43
ATG4B-221ENST00000483778 V9GYY9 64 aa6.06□□□□□ -1.44
ATG4B-221ENST00000483778 KRTAP12-3P60328 96 aa6.01□□□□□ -1.45
ATG4B-221ENST00000483778 RPS28P62857 69 aaKnown RBP6.01□□□□□ -1.45
ATG4B-221ENST00000483778 Q1T7F1 81 aa6.01□□□□□ -1.45
ATG4B-221ENST00000483778 UQCR11O14957 56 aa5.99□□□□□ -1.45
ATG4B-221ENST00000483778 KRTAP5-3Q6L8H2 238 aa5.94□□□□□ -1.46
ATG4B-221ENST00000483778 KRTAP20-2Q3LI61 65 aa5.92□□□□□ -1.46
ATG4B-221ENST00000483778 KRTAP5-5Q701N2 237 aaPredicted RBP5.92□□□□□ -1.46
ATG4B-221ENST00000483778 PSPHP1O15172 72 aa5.91□□□□□ -1.46
ATG4B-221ENST00000483778 KRTAP5-7Q6L8G8 165 aa5.91□□□□□ -1.46
ATG4B-221ENST00000483778 MIR22HGQ0VDD5 57 aa5.87□□□□□ -1.47
ATG4B-221ENST00000483778 LOC100996750A0A140TA64 210 aa5.85□□□□□ -1.47
ATG4B-221ENST00000483778 SPRR5A0A1B0GTR4 108 aa5.81□□□□□ -1.48
ATG4B-221ENST00000483778 A6NED7 52 aa5.75□□□□□ -1.49
ATG4B-221ENST00000483778 KRTAP12-4P60329 112 aa5.75□□□□□ -1.49
ATG4B-221ENST00000483778 K7ERS5 55 aa5.73□□□□□ -1.49
ATG4B-221ENST00000483778 KRTAP25-1Q3LHN0 102 aa5.67□□□□□ -1.5
ATG4B-221ENST00000483778 SYNE1Q8NF91 8797 aaKnown RBP5.64□□□□□ -1.51
ATG4B-221ENST00000483778 CDC42SE1Q9NRR8 79 aa5.57□□□□□ -1.52
ATG4B-221ENST00000483778 KRTAP15-1Q3LI76 137 aa5.54□□□□□ -1.52
ATG4B-221ENST00000483778 LCE3CQ5T5A8 94 aa5.53□□□□□ -1.52
ATG4B-221ENST00000483778 KRTAP19-4Q3LI73 84 aa5.52□□□□□ -1.53
ATG4B-221ENST00000483778 KRTAP6-1Q3LI64 71 aa5.46□□□□□ -1.54
ATG4B-221ENST00000483778 KRTAP4-11Q9BYQ6 195 aa5.46□□□□□ -1.54
ATG4B-221ENST00000483778 KRTAP5-2Q701N4 177 aa5.44□□□□□ -1.54
ATG4B-221ENST00000483778 KRTAP23-1A1A580 65 aa5.43□□□□□ -1.54
ATG4B-221ENST00000483778 MT1AP04731 61 aa5.42□□□□□ -1.54
ATG4B-221ENST00000483778 ROMO1P60602 79 aa5.38□□□□□ -1.55
ATG4B-221ENST00000483778 KRTAP9-6A8MVA2 160 aa5.32□□□□□ -1.56
ATG4B-221ENST00000483778 KRTAP5-8O75690 187 aa5.3□□□□□ -1.56
ATG4B-221ENST00000483778 BRK1Q8WUW1 75 aa5.29□□□□□ -1.56
ATG4B-221ENST00000483778 KRTAP9-4Q9BYQ2 154 aa5.28□□□□□ -1.56
ATG4B-221ENST00000483778 KRTAP6-2Q3LI66 62 aa5.25□□□□□ -1.57
ATG4B-221ENST00000483778 SVIPQ8NHG7 77 aa5.16□□□□□ -1.58
ATG4B-221ENST00000483778 MUC5ACP98088 5654 aa5.11□□□□□ -1.59
ATG4B-221ENST00000483778 OBSCNQ5VST9 7968 aa5.11□□□□□ -1.59
ATG4B-221ENST00000483778 AHNAKQ09666 5890 aaKnown RBP5.09□□□□□ -1.6
ATG4B-221ENST00000483778 MUC5BQ9HC84 5762 aaPredicted RBP5.06□□□□□ -1.6
ATG4B-221ENST00000483778 PMAIP1Q13794 54 aa5.02□□□□□ -1.61
ATG4B-221ENST00000483778 KRTAP9-9Q9BYP9 154 aa5□□□□□ -1.61
ATG4B-221ENST00000483778 KRTAP5-1Q6L8H4 278 aa4.94□□□□□ -1.62
ATG4B-221ENST00000483778 MT3P25713 68 aa4.93□□□□□ -1.62
ATG4B-221ENST00000483778 PRO0628Q9UI54 55 aa4.91□□□□□ -1.62
ATG4B-221ENST00000483778 PRAC1Q96KF2 57 aa4.69□□□□□ -1.66
ATG4B-221ENST00000483778 KTN1-AS1Q86SY8 53 aa4.61□□□□□ -1.67
ATG4B-221ENST00000483778 LCE1EQ5T753 118 aa4.57□□□□□ -1.68
ATG4B-221ENST00000483778 KRTAP4-2Q9BYR5 136 aa4.42□□□□□ -1.7
ATG4B-221ENST00000483778 LCE1BQ5T7P3 118 aa4.39□□□□□ -1.71
ATG4B-221ENST00000483778 LCE1CQ5T751 118 aa4.26□□□□□ -1.73
ATG4B-221ENST00000483778 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.75
ATG4B-221ENST00000483778 LUZP6Q538Z0 58 aa3.99□□□□□ -1.77
ATG4B-221ENST00000483778 LCE3DQ9BYE3 92 aa3.91□□□□□ -1.78
ATG4B-221ENST00000483778 KRTAP5-11Q6L8G4 156 aa3.87□□□□□ -1.79
ATG4B-221ENST00000483778 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.79
ATG4B-221ENST00000483778 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
ATG4B-221ENST00000483778 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
ATG4B-221ENST00000483778 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
ATG4B-221ENST00000483778 PHGR1C9JFL3 82 aa3.56□□□□□ -1.84
ATG4B-221ENST00000483778 H3BS24 57 aa3.54□□□□□ -1.84
ATG4B-221ENST00000483778 NDUFAF8A1L188 74 aa3.46□□□□□ -1.86
ATG4B-221ENST00000483778 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
ATG4B-221ENST00000483778 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.9
ATG4B-221ENST00000483778 A0A0A0MQY5 61 aa3.13□□□□□ -1.91
ATG4B-221ENST00000483778 INE1O15225 51 aa2.89□□□□□ -1.95
ATG4B-221ENST00000483778 PRM1P04553 51 aa2.74□□□□□ -1.97
ATG4B-221ENST00000483778 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
ATG4B-221ENST00000483778 MUC16Q8WXI7 14507 aa2.27□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 275.4 ms