RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 NEBP20929 6669 aa5.08□□□□□ -1.6
CLK3-204ENST00000483723 KRTAP5-9P26371 169 aa5.03□□□□□ -1.6
CLK3-204ENST00000483723 KRTAP19-4Q3LI73 84 aa5.03□□□□□ -1.6
CLK3-204ENST00000483723 MUC12Q9UKN1 5478 aa5.01□□□□□ -1.61
CLK3-204ENST00000483723 MT1LQ93083 61 aa5□□□□□ -1.61
CLK3-204ENST00000483723 LCE3CQ5T5A8 94 aa4.97□□□□□ -1.61
CLK3-204ENST00000483723 KRTAP20-1Q3LI63 56 aa4.92□□□□□ -1.62
CLK3-204ENST00000483723 H3BS24 57 aa4.89□□□□□ -1.63
CLK3-204ENST00000483723 SPRR2FQ96RM1 72 aa4.89□□□□□ -1.63
CLK3-204ENST00000483723 LUZP6Q538Z0 58 aa4.86□□□□□ -1.63
CLK3-204ENST00000483723 KRTAP19-3Q7Z4W3 81 aa4.86□□□□□ -1.63
CLK3-204ENST00000483723 MDN1Q9NU22 5596 aa4.85□□□□□ -1.63
CLK3-204ENST00000483723 MT1GP13640 62 aa4.84□□□□□ -1.63
CLK3-204ENST00000483723 KRTAP4-7Q9BYR0 210 aa4.83□□□□□ -1.64
CLK3-204ENST00000483723 NDUFAF8A1L188 74 aa4.82□□□□□ -1.64
CLK3-204ENST00000483723 SPRR2EP22531 72 aa4.8□□□□□ -1.64
CLK3-204ENST00000483723 SPRR2BP35325 72 aa4.8□□□□□ -1.64
CLK3-204ENST00000483723 SPRR2AP35326 72 aa4.8□□□□□ -1.64
CLK3-204ENST00000483723 KRTAP2-3P0C7H8 128 aa4.8□□□□□ -1.64
CLK3-204ENST00000483723 KRTAP2-4Q9BYR9 128 aa4.8□□□□□ -1.64
CLK3-204ENST00000483723 LCE5AQ5TCM9 118 aa4.79□□□□□ -1.64
CLK3-204ENST00000483723 MT1MQ8N339 61 aa4.78□□□□□ -1.64
CLK3-204ENST00000483723 LCE1AQ5T7P2 110 aa4.73□□□□□ -1.65
CLK3-204ENST00000483723 KRTAP9-6A8MVA2 160 aa4.72□□□□□ -1.65
CLK3-204ENST00000483723 KRTAP4-3Q9BYR4 195 aa4.68□□□□□ -1.66
CLK3-204ENST00000483723 SPRR2DP22532 72 aa4.65□□□□□ -1.67
CLK3-204ENST00000483723 KRTAP2-2Q9BYT5 123 aa4.64□□□□□ -1.67
CLK3-204ENST00000483723 KRTAP2-1Q9BYU5 128 aa4.64□□□□□ -1.67
CLK3-204ENST00000483723 KRTAP4-12Q9BQ66 201 aa4.59□□□□□ -1.67
CLK3-204ENST00000483723 LCE3BQ5TA77 95 aa4.57□□□□□ -1.68
CLK3-204ENST00000483723 KRTAP9-9Q9BYP9 154 aa4.43□□□□□ -1.7
CLK3-204ENST00000483723 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
CLK3-204ENST00000483723 KRTAP5-5Q701N2 237 aaPredicted RBP4.33□□□□□ -1.72
CLK3-204ENST00000483723 DSTQ03001 7570 aaKnown RBP4.33□□□□□ -1.72
CLK3-204ENST00000483723 LCE1DQ5T752 114 aa4.26□□□□□ -1.73
CLK3-204ENST00000483723 MT1AP04731 61 aa4.25□□□□□ -1.73
CLK3-204ENST00000483723 A0A0A0MQY5 61 aa4.24□□□□□ -1.73
CLK3-204ENST00000483723 LCE4AQ5TA78 99 aa4.24□□□□□ -1.73
CLK3-204ENST00000483723 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.74
CLK3-204ENST00000483723 KRTAP4-9Q9BYQ8 210 aa4.18□□□□□ -1.74
CLK3-204ENST00000483723 GPR98Q8WXG9 6306 aa4.11□□□□□ -1.75
CLK3-204ENST00000483723 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
CLK3-204ENST00000483723 MT4P47944 62 aa4.05□□□□□ -1.76
CLK3-204ENST00000483723 SYNE1Q8NF91 8797 aaKnown RBP4.03□□□□□ -1.76
CLK3-204ENST00000483723 HMCN1Q96RW7 5635 aa4.02□□□□□ -1.77
CLK3-204ENST00000483723 INE1O15225 51 aa4.01□□□□□ -1.77
CLK3-204ENST00000483723 KRTAP4-2Q9BYR5 136 aa4□□□□□ -1.77
CLK3-204ENST00000483723 KRTAP4-11Q9BYQ6 195 aa3.98□□□□□ -1.77
CLK3-204ENST00000483723 KRTAP12-4P60329 112 aa3.95□□□□□ -1.78
CLK3-204ENST00000483723 AHNAK2Q8IVF2 5795 aa3.85□□□□□ -1.79
CLK3-204ENST00000483723 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.79
CLK3-204ENST00000483723 MT3P25713 68 aa3.84□□□□□ -1.8
CLK3-204ENST00000483723 KRTAP5-10Q6L8G5 202 aa3.83□□□□□ -1.8
CLK3-204ENST00000483723 KRTAP20-2Q3LI61 65 aa3.81□□□□□ -1.8
CLK3-204ENST00000483723 KRTAP5-3Q6L8H2 238 aa3.74□□□□□ -1.81
CLK3-204ENST00000483723 KRTAP5-2Q701N4 177 aa3.74□□□□□ -1.81
CLK3-204ENST00000483723 LCE3DQ9BYE3 92 aa3.73□□□□□ -1.81
CLK3-204ENST00000483723 KRTAP5-7Q6L8G8 165 aa3.7□□□□□ -1.82
CLK3-204ENST00000483723 LCE3EQ5T5B0 92 aa3.65□□□□□ -1.82
CLK3-204ENST00000483723 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
CLK3-204ENST00000483723 KRTAP5-8O75690 187 aa3.36□□□□□ -1.87
CLK3-204ENST00000483723 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
CLK3-204ENST00000483723 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
CLK3-204ENST00000483723 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
CLK3-204ENST00000483723 PRM1P04553 51 aa3.19□□□□□ -1.9
CLK3-204ENST00000483723 MUC5BQ9HC84 5762 aaPredicted RBP3.19□□□□□ -1.9
CLK3-204ENST00000483723 AHNAKQ09666 5890 aaKnown RBP3.18□□□□□ -1.9
CLK3-204ENST00000483723 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
CLK3-204ENST00000483723 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
CLK3-204ENST00000483723 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.93□□□□□ -1.94
CLK3-204ENST00000483723 KRTAP21-2Q3LI59 83 aa2.77□□□□□ -1.97
CLK3-204ENST00000483723 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
CLK3-204ENST00000483723 LCE1FQ5T754 118 aa2.52□□□□□ -2.01
CLK3-204ENST00000483723 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
CLK3-204ENST00000483723 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
CLK3-204ENST00000483723 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
CLK3-204ENST00000483723 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
CLK3-204ENST00000483723 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 185.5 ms