RNA–Protein interactions for RNA: ENST00000483671.1

RFTN1-209, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 2

Gene RFTN1, Length 1,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-209ENST00000483671 LCE1DQ5T752 114 aa6.02□□□□□ -1.45
RFTN1-209ENST00000483671 KRTAP19-4Q3LI73 84 aa5.99□□□□□ -1.45
RFTN1-209ENST00000483671 MT1EP04732 61 aa5.93□□□□□ -1.46
RFTN1-209ENST00000483671 KRTAP15-1Q3LI76 137 aa5.93□□□□□ -1.46
RFTN1-209ENST00000483671 KRTAP5-9P26371 169 aa5.89□□□□□ -1.47
RFTN1-209ENST00000483671 KRTAP4-9Q9BYQ8 210 aa5.87□□□□□ -1.47
RFTN1-209ENST00000483671 SYNE2Q8WXH0 6885 aaKnown RBP5.84□□□□□ -1.47
RFTN1-209ENST00000483671 SPRR2FQ96RM1 72 aa5.83□□□□□ -1.48
RFTN1-209ENST00000483671 KRTAP6-3Q3LI67 103 aa5.81□□□□□ -1.48
RFTN1-209ENST00000483671 KRTAP4-2Q9BYR5 136 aa5.81□□□□□ -1.48
RFTN1-209ENST00000483671 MT1LQ93083 61 aa5.79□□□□□ -1.48
RFTN1-209ENST00000483671 LCE4AQ5TA78 99 aa5.77□□□□□ -1.49
RFTN1-209ENST00000483671 MUC12Q9UKN1 5478 aa5.73□□□□□ -1.49
RFTN1-209ENST00000483671 KRTAP9-7A8MTY7 169 aa5.73□□□□□ -1.49
RFTN1-209ENST00000483671 KRTAP19-3Q7Z4W3 81 aa5.72□□□□□ -1.49
RFTN1-209ENST00000483671 MT1GP13640 62 aa5.67□□□□□ -1.5
RFTN1-209ENST00000483671 LCE3CQ5T5A8 94 aa5.66□□□□□ -1.5
RFTN1-209ENST00000483671 LCE5AQ5TCM9 118 aa5.65□□□□□ -1.51
RFTN1-209ENST00000483671 LCE1AQ5T7P2 110 aa5.64□□□□□ -1.51
RFTN1-209ENST00000483671 KRTAP4-11Q9BYQ6 195 aa5.64□□□□□ -1.51
RFTN1-209ENST00000483671 SPRR5A0A1B0GTR4 108 aa5.62□□□□□ -1.51
RFTN1-209ENST00000483671 MT1MQ8N339 61 aa5.58□□□□□ -1.52
RFTN1-209ENST00000483671 MDN1Q9NU22 5596 aa5.58□□□□□ -1.52
RFTN1-209ENST00000483671 SPRR2EP22531 72 aa5.56□□□□□ -1.52
RFTN1-209ENST00000483671 SPRR2BP35325 72 aa5.56□□□□□ -1.52
RFTN1-209ENST00000483671 SPRR2AP35326 72 aa5.56□□□□□ -1.52
RFTN1-209ENST00000483671 NEBP20929 6669 aa5.44□□□□□ -1.54
RFTN1-209ENST00000483671 KRTAP4-3Q9BYR4 195 aa5.41□□□□□ -1.54
RFTN1-209ENST00000483671 SPRR2DP22532 72 aa5.37□□□□□ -1.55
RFTN1-209ENST00000483671 KRTAP9-6A8MVA2 160 aa5.33□□□□□ -1.56
RFTN1-209ENST00000483671 KRTAP5-3Q6L8H2 238 aa5.33□□□□□ -1.56
RFTN1-209ENST00000483671 LUZP6Q538Z0 58 aa5.3□□□□□ -1.56
RFTN1-209ENST00000483671 DSTQ03001 7570 aaKnown RBP5.21□□□□□ -1.58
RFTN1-209ENST00000483671 KRTAP2-3P0C7H8 128 aa5.08□□□□□ -1.6
RFTN1-209ENST00000483671 KRTAP5-5Q701N2 237 aaPredicted RBP5.08□□□□□ -1.6
RFTN1-209ENST00000483671 KRTAP2-4Q9BYR9 128 aa5.08□□□□□ -1.6
RFTN1-209ENST00000483671 NDUFAF8A1L188 74 aa5.06□□□□□ -1.6
RFTN1-209ENST00000483671 KRTAP20-1Q3LI63 56 aa4.99□□□□□ -1.61
RFTN1-209ENST00000483671 KRTAP2-2Q9BYT5 123 aa4.97□□□□□ -1.61
RFTN1-209ENST00000483671 KRTAP2-1Q9BYU5 128 aa4.97□□□□□ -1.61
RFTN1-209ENST00000483671 MT1AP04731 61 aa4.95□□□□□ -1.62
RFTN1-209ENST00000483671 KRTAP5-4Q6L8H1 288 aa4.91□□□□□ -1.62
RFTN1-209ENST00000483671 KRTAP6-1Q3LI64 71 aa4.85□□□□□ -1.63
RFTN1-209ENST00000483671 SYNE1Q8NF91 8797 aaKnown RBP4.72□□□□□ -1.65
RFTN1-209ENST00000483671 KRTAP12-4P60329 112 aa4.72□□□□□ -1.65
RFTN1-209ENST00000483671 MT4P47944 62 aa4.62□□□□□ -1.67
RFTN1-209ENST00000483671 HMCN1Q96RW7 5635 aa4.55□□□□□ -1.68
RFTN1-209ENST00000483671 A0A0A0MQY5 61 aa4.55□□□□□ -1.68
RFTN1-209ENST00000483671 KRTAP20-2Q3LI61 65 aa4.55□□□□□ -1.68
RFTN1-209ENST00000483671 KRTAP6-2Q3LI66 62 aa4.48□□□□□ -1.69
RFTN1-209ENST00000483671 MT3P25713 68 aa4.47□□□□□ -1.69
RFTN1-209ENST00000483671 KRTAP5-2Q701N4 177 aa4.45□□□□□ -1.7
RFTN1-209ENST00000483671 INE1O15225 51 aa4.25□□□□□ -1.73
RFTN1-209ENST00000483671 LCE3DQ9BYE3 92 aa4.22□□□□□ -1.73
RFTN1-209ENST00000483671 AHNAK2Q8IVF2 5795 aa4.1□□□□□ -1.75
RFTN1-209ENST00000483671 LCE3EQ5T5B0 92 aa4.1□□□□□ -1.75
RFTN1-209ENST00000483671 OBSCNQ5VST9 7968 aa4.05□□□□□ -1.76
RFTN1-209ENST00000483671 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
RFTN1-209ENST00000483671 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.95□□□□□ -1.78
RFTN1-209ENST00000483671 KRTAP5-10Q6L8G5 202 aa3.91□□□□□ -1.78
RFTN1-209ENST00000483671 KRTAP5-8O75690 187 aa3.83□□□□□ -1.8
RFTN1-209ENST00000483671 KRTAP5-1Q6L8H4 278 aa3.83□□□□□ -1.8
RFTN1-209ENST00000483671 GPR98Q8WXG9 6306 aa3.81□□□□□ -1.8
RFTN1-209ENST00000483671 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
RFTN1-209ENST00000483671 KRTAP5-7Q6L8G8 165 aa3.75□□□□□ -1.81
RFTN1-209ENST00000483671 MUC5ACP98088 5654 aa3.67□□□□□ -1.82
RFTN1-209ENST00000483671 LCE1CQ5T751 118 aa3.67□□□□□ -1.82
RFTN1-209ENST00000483671 LCE1BQ5T7P3 118 aa3.67□□□□□ -1.82
RFTN1-209ENST00000483671 PRM1P04553 51 aa3.5□□□□□ -1.85
RFTN1-209ENST00000483671 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
RFTN1-209ENST00000483671 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
RFTN1-209ENST00000483671 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
RFTN1-209ENST00000483671 KRTAP21-2Q3LI59 83 aa3.21□□□□□ -1.89
RFTN1-209ENST00000483671 AHNAKQ09666 5890 aaKnown RBP3.16□□□□□ -1.9
RFTN1-209ENST00000483671 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
RFTN1-209ENST00000483671 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
RFTN1-209ENST00000483671 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
RFTN1-209ENST00000483671 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 56.2 ms