RNA–Protein interactions for RNA: ENST00000483629.5

EWSR1-218, Transcript of EWS RNA binding protein 1, human

TSL 5

Gene EWSR1, Length 1,818 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EWSR1-218	ENST00000483629	SPRR2F	Q96RM1	72 aa		6.32	□□□□□ -1.4
EWSR1-218	ENST00000483629	LOC100996750	A0A140TA64	210 aa		6.29	□□□□□ -1.4
EWSR1-218	ENST00000483629	KRTAP4-6	Q9BYQ5	205 aa		6.29	□□□□□ -1.4
EWSR1-218	ENST00000483629	KRTAP19-3	Q7Z4W3	81 aa		6.29	□□□□□ -1.4
EWSR1-218	ENST00000483629	MUC12	Q9UKN1	5478 aa		6.25	□□□□□ -1.41
EWSR1-218	ENST00000483629	MT1G	P13640	62 aa		6.22	□□□□□ -1.41
EWSR1-218	ENST00000483629	KRTAP9-6	A8MVA2	160 aa		6.21	□□□□□ -1.42
EWSR1-218	ENST00000483629	MT1M	Q8N339	61 aa		6.2	□□□□□ -1.42
EWSR1-218	ENST00000483629	KRTAP5-9	P26371	169 aa		6.19	□□□□□ -1.42
EWSR1-218	ENST00000483629	SYNE2	Q8WXH0	6885 aa	Known RBP	6.18	□□□□□ -1.42
EWSR1-218	ENST00000483629	LCE5A	Q5TCM9	118 aa		6.16	□□□□□ -1.42
EWSR1-218	ENST00000483629	KRTAP4-3	Q9BYR4	195 aa		6.13	□□□□□ -1.43
EWSR1-218	ENST00000483629	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	6.09	□□□□□ -1.44
EWSR1-218	ENST00000483629		H3BS24	57 aa		6.04	□□□□□ -1.44
EWSR1-218	ENST00000483629	LCE1A	Q5T7P2	110 aa		6.04	□□□□□ -1.44
EWSR1-218	ENST00000483629	KRTAP6-3	Q3LI67	103 aa		5.98	□□□□□ -1.45
EWSR1-218	ENST00000483629	SPRR2E	P22531	72 aa		5.95	□□□□□ -1.46
EWSR1-218	ENST00000483629	SPRR2B	P35325	72 aa		5.95	□□□□□ -1.46
EWSR1-218	ENST00000483629	SPRR2A	P35326	72 aa		5.95	□□□□□ -1.46
EWSR1-218	ENST00000483629	KRTAP9-7	A8MTY7	169 aa		5.93	□□□□□ -1.46
EWSR1-218	ENST00000483629	MDN1	Q9NU22	5596 aa		5.92	□□□□□ -1.46
EWSR1-218	ENST00000483629	KRTAP2-3	P0C7H8	128 aa		5.78	□□□□□ -1.48
EWSR1-218	ENST00000483629	KRTAP2-4	Q9BYR9	128 aa		5.78	□□□□□ -1.48
EWSR1-218	ENST00000483629	KRTAP2-1	Q9BYU5	128 aa		5.78	□□□□□ -1.48
EWSR1-218	ENST00000483629	DST	Q03001	7570 aa	Known RBP	5.73	□□□□□ -1.49
EWSR1-218	ENST00000483629		A0A0A0MQY5	61 aa		5.73	□□□□□ -1.49
EWSR1-218	ENST00000483629	SPRR2D	P22532	72 aa		5.72	□□□□□ -1.49
EWSR1-218	ENST00000483629	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.58	□□□□□ -1.52
EWSR1-218	ENST00000483629	NEB	P20929	6669 aa		5.56	□□□□□ -1.52
EWSR1-218	ENST00000483629	MT1A	P04731	61 aa		5.5	□□□□□ -1.53
EWSR1-218	ENST00000483629	KRTAP6-1	Q3LI64	71 aa		5.48	□□□□□ -1.53
EWSR1-218	ENST00000483629	LCE3B	Q5TA77	95 aa		5.48	□□□□□ -1.53
EWSR1-218	ENST00000483629	INE1	O15225	51 aa		5.35	□□□□□ -1.55
EWSR1-218	ENST00000483629	SYNE1	Q8NF91	8797 aa	Known RBP	5.24	□□□□□ -1.57
EWSR1-218	ENST00000483629	KRTAP20-1	Q3LI63	56 aa		5.23	□□□□□ -1.57
EWSR1-218	ENST00000483629	KRTAP5-4	Q6L8H1	288 aa		5.23	□□□□□ -1.57
EWSR1-218	ENST00000483629	KRTAP9-4	Q9BYQ2	154 aa		5.21	□□□□□ -1.58
EWSR1-218	ENST00000483629	KRTAP4-9	Q9BYQ8	210 aa		5.13	□□□□□ -1.59
EWSR1-218	ENST00000483629	KRTAP2-2	Q9BYT5	123 aa		5.09	□□□□□ -1.6
EWSR1-218	ENST00000483629	KRTAP12-4	P60329	112 aa		5.08	□□□□□ -1.6
EWSR1-218	ENST00000483629	LCE4A	Q5TA78	99 aa		5.05	□□□□□ -1.6
EWSR1-218	ENST00000483629	KRTAP9-9	Q9BYP9	154 aa		5.05	□□□□□ -1.6
EWSR1-218	ENST00000483629	KRTAP6-2	Q3LI66	62 aa		5.01	□□□□□ -1.61
EWSR1-218	ENST00000483629	MT4	P47944	62 aa		4.98	□□□□□ -1.61
EWSR1-218	ENST00000483629	KRTAP5-3	Q6L8H2	238 aa		4.97	□□□□□ -1.61
EWSR1-218	ENST00000483629	MT3	P25713	68 aa		4.95	□□□□□ -1.62
EWSR1-218	ENST00000483629	LCE3D	Q9BYE3	92 aa		4.9	□□□□□ -1.63
EWSR1-218	ENST00000483629	KRTAP20-2	Q3LI61	65 aa		4.88	□□□□□ -1.63
EWSR1-218	ENST00000483629	LCE1D	Q5T752	114 aa		4.86	□□□□□ -1.63
EWSR1-218	ENST00000483629	KRTAP4-2	Q9BYR5	136 aa		4.84	□□□□□ -1.63
EWSR1-218	ENST00000483629	KRTAP4-12	Q9BQ66	201 aa		4.82	□□□□□ -1.64
EWSR1-218	ENST00000483629	LCE3E	Q5T5B0	92 aa		4.78	□□□□□ -1.64
EWSR1-218	ENST00000483629	KRTAP5-2	Q701N4	177 aa		4.78	□□□□□ -1.64
EWSR1-218	ENST00000483629	HMCN1	Q96RW7	5635 aa		4.76	□□□□□ -1.65
EWSR1-218	ENST00000483629	OBSCN	Q5VST9	7968 aa		4.55	□□□□□ -1.68
EWSR1-218	ENST00000483629	KRTAP4-11	Q9BYQ6	195 aa		4.42	□□□□□ -1.7
EWSR1-218	ENST00000483629	PRM1	P04553	51 aa		4.28	□□□□□ -1.72
EWSR1-218	ENST00000483629	LCE1E	Q5T753	118 aa		4.25	□□□□□ -1.73
EWSR1-218	ENST00000483629	GPR98	Q8WXG9	6306 aa		4.24	□□□□□ -1.73
EWSR1-218	ENST00000483629	AHNAK2	Q8IVF2	5795 aa		4.15	□□□□□ -1.74
EWSR1-218	ENST00000483629	KRTAP5-1	Q6L8H4	278 aa		4.11	□□□□□ -1.75
EWSR1-218	ENST00000483629	KRTAP5-10	Q6L8G5	202 aa		4.07	□□□□□ -1.76
EWSR1-218	ENST00000483629	KRTAP5-8	O75690	187 aa		4.03	□□□□□ -1.76
EWSR1-218	ENST00000483629	LCE1B	Q5T7P3	118 aa		4.03	□□□□□ -1.76
EWSR1-218	ENST00000483629	MUC5AC	P98088	5654 aa		4.02	□□□□□ -1.77
EWSR1-218	ENST00000483629	LCE1C	Q5T751	118 aa		3.98	□□□□□ -1.77
EWSR1-218	ENST00000483629	KRTAP5-7	Q6L8G8	165 aa		3.93	□□□□□ -1.78
EWSR1-218	ENST00000483629	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.74	□□□□□ -1.81
EWSR1-218	ENST00000483629	KRTAP21-2	Q3LI59	83 aa		3.58	□□□□□ -1.84
EWSR1-218	ENST00000483629	KRTAP5-11	Q6L8G4	156 aa		3.49	□□□□□ -1.85
EWSR1-218	ENST00000483629	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.4	□□□□□ -1.86
EWSR1-218	ENST00000483629	AHNAK	Q09666	5890 aa	Known RBP	3.31	□□□□□ -1.88
EWSR1-218	ENST00000483629	KRTAP4-4	Q9BYR3	166 aa		3.2	□□□□□ -1.9
EWSR1-218	ENST00000483629	LCE1F	Q5T754	118 aa		3.07	□□□□□ -1.92
EWSR1-218	ENST00000483629	PHGR1	C9JFL3	82 aa		3	□□□□□ -1.93
EWSR1-218	ENST00000483629	MUC19	Q7Z5P9	8384 aa		2.65	□□□□□ -1.98
EWSR1-218	ENST00000483629	KRTAP21-1	Q3LI58	79 aa		2.64	□□□□□ -1.99
EWSR1-218	ENST00000483629	MUC16	Q8WXI7	14507 aa		1.98	□□□□□ -2.09

Retrieved 78 of 20,778 RNA–protein pairs in 59.3 ms