RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 KRTAP9-3Q9BYQ3 159 aa4.94□□□□□ -1.62
LINC00477-201ENST00000483544 FCGBPQ9Y6R7 5405 aaPredicted RBP4.89□□□□□ -1.63
LINC00477-201ENST00000483544 KRTAP10-12P60413 245 aa4.88□□□□□ -1.63
LINC00477-201ENST00000483544 USH2AO75445 5202 aa4.86□□□□□ -1.63
LINC00477-201ENST00000483544 SYNE2Q8WXH0 6885 aaKnown RBP4.81□□□□□ -1.64
LINC00477-201ENST00000483544 KRTAP12-3P60328 96 aa4.81□□□□□ -1.64
LINC00477-201ENST00000483544 MACF1Q9UPN3 7388 aaKnown RBP4.8□□□□□ -1.64
LINC00477-201ENST00000483544 KRTAP20-1Q3LI63 56 aa4.8□□□□□ -1.64
LINC00477-201ENST00000483544 KRTAP6-3Q3LI67 103 aa4.8□□□□□ -1.64
LINC00477-201ENST00000483544 LCE5AQ5TCM9 118 aa4.79□□□□□ -1.64
LINC00477-201ENST00000483544 NEBP20929 6669 aa4.74□□□□□ -1.65
LINC00477-201ENST00000483544 KRTAP10-7P60409 375 aaPredicted RBP4.74□□□□□ -1.65
LINC00477-201ENST00000483544 LCE4AQ5TA78 99 aa4.72□□□□□ -1.65
LINC00477-201ENST00000483544 KRTAP19-4Q3LI73 84 aa4.61□□□□□ -1.67
LINC00477-201ENST00000483544 KRTAP19-5Q3LI72 72 aa4.57□□□□□ -1.68
LINC00477-201ENST00000483544 LCE3CQ5T5A8 94 aa4.54□□□□□ -1.68
LINC00477-201ENST00000483544 KRTAP19-6Q3LI70 58 aa4.5□□□□□ -1.69
LINC00477-201ENST00000483544 MUC12Q9UKN1 5478 aa4.49□□□□□ -1.69
LINC00477-201ENST00000483544 KRTAP2-3P0C7H8 128 aa4.48□□□□□ -1.69
LINC00477-201ENST00000483544 KRTAP2-4Q9BYR9 128 aa4.48□□□□□ -1.69
LINC00477-201ENST00000483544 KRTAP2-1Q9BYU5 128 aa4.48□□□□□ -1.69
LINC00477-201ENST00000483544 GPR98Q8WXG9 6306 aa4.48□□□□□ -1.69
LINC00477-201ENST00000483544 KRTAP19-7Q3SYF9 63 aa4.4□□□□□ -1.71
LINC00477-201ENST00000483544 KMT2DO14686 5537 aa4.37□□□□□ -1.71
LINC00477-201ENST00000483544 MT1EP04732 61 aa4.31□□□□□ -1.72
LINC00477-201ENST00000483544 MT1LQ93083 61 aa4.29□□□□□ -1.72
LINC00477-201ENST00000483544 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
LINC00477-201ENST00000483544 MDN1Q9NU22 5596 aa4.26□□□□□ -1.73
LINC00477-201ENST00000483544 KRTAP5-9P26371 169 aa4.26□□□□□ -1.73
LINC00477-201ENST00000483544 KRTAP9-6A8MVA2 160 aa4.24□□□□□ -1.73
LINC00477-201ENST00000483544 MT1GP13640 62 aa4.09□□□□□ -1.76
LINC00477-201ENST00000483544 KRTAP19-3Q7Z4W3 81 aa4.06□□□□□ -1.76
LINC00477-201ENST00000483544 SPRR2EP22531 72 aa4.04□□□□□ -1.76
LINC00477-201ENST00000483544 SPRR2BP35325 72 aa4.04□□□□□ -1.76
LINC00477-201ENST00000483544 SPRR2AP35326 72 aa4.04□□□□□ -1.76
LINC00477-201ENST00000483544 MT1MQ8N339 61 aa4.02□□□□□ -1.77
LINC00477-201ENST00000483544 KRTAP12-4P60329 112 aa4.01□□□□□ -1.77
LINC00477-201ENST00000483544 SPRR2DP22532 72 aa3.92□□□□□ -1.78
LINC00477-201ENST00000483544 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.91□□□□□ -1.78
LINC00477-201ENST00000483544 LCE1AQ5T7P2 110 aa3.9□□□□□ -1.79
LINC00477-201ENST00000483544 SPRR2FQ96RM1 72 aa3.9□□□□□ -1.79
LINC00477-201ENST00000483544 KRTAP4-3Q9BYR4 195 aa3.9□□□□□ -1.79
LINC00477-201ENST00000483544 AHNAK2Q8IVF2 5795 aa3.83□□□□□ -1.8
LINC00477-201ENST00000483544 KRTAP5-10Q6L8G5 202 aa3.79□□□□□ -1.8
LINC00477-201ENST00000483544 KRTAP5-7Q6L8G8 165 aa3.78□□□□□ -1.8
LINC00477-201ENST00000483544 HMCN1Q96RW7 5635 aa3.7□□□□□ -1.82
LINC00477-201ENST00000483544 MT1AP04731 61 aa3.7□□□□□ -1.82
LINC00477-201ENST00000483544 DSTQ03001 7570 aaKnown RBP3.69□□□□□ -1.82
LINC00477-201ENST00000483544 PRM1P04553 51 aa3.64□□□□□ -1.83
LINC00477-201ENST00000483544 LCE1EQ5T753 118 aa3.6□□□□□ -1.83
LINC00477-201ENST00000483544 KRTAP6-1Q3LI64 71 aa3.59□□□□□ -1.83
LINC00477-201ENST00000483544 KRTAP5-5Q701N2 237 aaPredicted RBP3.59□□□□□ -1.83
LINC00477-201ENST00000483544 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
LINC00477-201ENST00000483544 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
LINC00477-201ENST00000483544 LCE3DQ9BYE3 92 aa3.49□□□□□ -1.85
LINC00477-201ENST00000483544 MT4P47944 62 aa3.46□□□□□ -1.86
LINC00477-201ENST00000483544 AHNAKQ09666 5890 aaKnown RBP3.43□□□□□ -1.86
LINC00477-201ENST00000483544 MUC5BQ9HC84 5762 aaPredicted RBP3.35□□□□□ -1.87
LINC00477-201ENST00000483544 MT3P25713 68 aa3.32□□□□□ -1.88
LINC00477-201ENST00000483544 KRTAP5-4Q6L8H1 288 aa3.31□□□□□ -1.88
LINC00477-201ENST00000483544 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
LINC00477-201ENST00000483544 MUC5ACP98088 5654 aa3.28□□□□□ -1.88
LINC00477-201ENST00000483544 SYNE1Q8NF91 8797 aaKnown RBP3.28□□□□□ -1.89
LINC00477-201ENST00000483544 KRTAP6-2Q3LI66 62 aa3.27□□□□□ -1.89
LINC00477-201ENST00000483544 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
LINC00477-201ENST00000483544 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.9
LINC00477-201ENST00000483544 KRTAP20-2Q3LI61 65 aa3.09□□□□□ -1.91
LINC00477-201ENST00000483544 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
LINC00477-201ENST00000483544 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
LINC00477-201ENST00000483544 OBSCNQ5VST9 7968 aa2.84□□□□□ -1.96
LINC00477-201ENST00000483544 LCE1CQ5T751 118 aa2.59□□□□□ -2
LINC00477-201ENST00000483544 LCE1BQ5T7P3 118 aa2.59□□□□□ -2
LINC00477-201ENST00000483544 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
LINC00477-201ENST00000483544 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.03
LINC00477-201ENST00000483544 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
LINC00477-201ENST00000483544 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
LINC00477-201ENST00000483544 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 60.8 ms