RNA–Protein interactions for RNA: ENST00000483538.1

POLR1A-207, Transcript of RNA polymerase I subunit A, humanhuman

TSL 4

Gene POLR1A, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-207ENST00000483538 PRR15LQ9BU68 103 aa3.37□□□□□ -1.87
POLR1A-207ENST00000483538 KRTAP2-3P0C7H8 128 aa3.34□□□□□ -1.87
POLR1A-207ENST00000483538 KRTAP2-4Q9BYR9 128 aa3.34□□□□□ -1.87
POLR1A-207ENST00000483538 C10orf95Q9H7T3 257 aa3.34□□□□□ -1.87
POLR1A-207ENST00000483538 MT1EP04732 61 aa3.33□□□□□ -1.88
POLR1A-207ENST00000483538 SPRR2DP22532 72 aa3.33□□□□□ -1.88
POLR1A-207ENST00000483538 UQCR11O14957 56 aa3.3□□□□□ -1.88
POLR1A-207ENST00000483538 KRTAP19-5Q3LI72 72 aa3.29□□□□□ -1.88
POLR1A-207ENST00000483538 Q1T7F1 81 aa3.27□□□□□ -1.89
POLR1A-207ENST00000483538 LCE3AQ5TA76 89 aa3.27□□□□□ -1.89
POLR1A-207ENST00000483538 PSPHP1O15172 72 aa3.26□□□□□ -1.89
POLR1A-207ENST00000483538 MIR22HGQ0VDD5 57 aa3.25□□□□□ -1.89
POLR1A-207ENST00000483538 KRTAP19-3Q7Z4W3 81 aa3.25□□□□□ -1.89
POLR1A-207ENST00000483538 TNP1P09430 55 aa3.23□□□□□ -1.89
POLR1A-207ENST00000483538 KRTAP2-2Q9BYT5 123 aa3.23□□□□□ -1.89
POLR1A-207ENST00000483538 KRTAP2-1Q9BYU5 128 aa3.23□□□□□ -1.89
POLR1A-207ENST00000483538 V9GYY9 64 aa3.22□□□□□ -1.89
POLR1A-207ENST00000483538 MT1LQ93083 61 aa3.19□□□□□ -1.9
POLR1A-207ENST00000483538 RPS28P62857 69 aaKnown RBP3.17□□□□□ -1.9
POLR1A-207ENST00000483538 MT1GP13640 62 aa3.16□□□□□ -1.9
POLR1A-207ENST00000483538 MT1MQ8N339 61 aa3.16□□□□□ -1.9
POLR1A-207ENST00000483538 DSTQ03001 7570 aaKnown RBP3.13□□□□□ -1.91
POLR1A-207ENST00000483538 A6NED7 52 aa3.12□□□□□ -1.91
POLR1A-207ENST00000483538 KRTAP12-3P60328 96 aa3.11□□□□□ -1.91
POLR1A-207ENST00000483538 KRTAP25-1Q3LHN0 102 aa3.11□□□□□ -1.91
POLR1A-207ENST00000483538 KRTAP4-3Q9BYR4 195 aa3.11□□□□□ -1.91
POLR1A-207ENST00000483538 K7ERS5 55 aa3.09□□□□□ -1.91
POLR1A-207ENST00000483538 PP632Q6XCG6 107 aa3.09□□□□□ -1.91
POLR1A-207ENST00000483538 CDC42SE1Q9NRR8 79 aa3.02□□□□□ -1.93
POLR1A-207ENST00000483538 ROMO1P60602 79 aa2.97□□□□□ -1.93
POLR1A-207ENST00000483538 KRTAP5-4Q6L8H1 288 aa2.97□□□□□ -1.93
POLR1A-207ENST00000483538 KRTAP5-5Q701N2 237 aaPredicted RBP2.93□□□□□ -1.94
POLR1A-207ENST00000483538 MT4P47944 62 aa2.92□□□□□ -1.94
POLR1A-207ENST00000483538 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
POLR1A-207ENST00000483538 HMCN1Q96RW7 5635 aa2.9□□□□□ -1.94
POLR1A-207ENST00000483538 PRAC1Q96KF2 57 aa2.9□□□□□ -1.95
POLR1A-207ENST00000483538 LCE3CQ5T5A8 94 aa2.88□□□□□ -1.95
POLR1A-207ENST00000483538 KRTAP9-6A8MVA2 160 aa2.79□□□□□ -1.96
POLR1A-207ENST00000483538 BRK1Q8WUW1 75 aa2.79□□□□□ -1.96
POLR1A-207ENST00000483538 KRTAP20-2Q3LI61 65 aa2.78□□□□□ -1.96
POLR1A-207ENST00000483538 AHNAK2Q8IVF2 5795 aa2.75□□□□□ -1.97
POLR1A-207ENST00000483538 SPRR5A0A1B0GTR4 108 aa2.75□□□□□ -1.97
POLR1A-207ENST00000483538 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
POLR1A-207ENST00000483538 KRTAP12-4P60329 112 aa2.71□□□□□ -1.98
POLR1A-207ENST00000483538 KRTAP5-10Q6L8G5 202 aa2.71□□□□□ -1.98
POLR1A-207ENST00000483538 SYNE1Q8NF91 8797 aaKnown RBP2.71□□□□□ -1.98
POLR1A-207ENST00000483538 MT1AP04731 61 aa2.7□□□□□ -1.98
POLR1A-207ENST00000483538 KRTAP6-1Q3LI64 71 aa2.7□□□□□ -1.98
POLR1A-207ENST00000483538 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
POLR1A-207ENST00000483538 MT3P25713 68 aa2.61□□□□□ -1.99
POLR1A-207ENST00000483538 NDUFAF8A1L188 74 aa2.6□□□□□ -1.99
POLR1A-207ENST00000483538 PMAIP1Q13794 54 aa2.59□□□□□ -1.99
POLR1A-207ENST00000483538 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
POLR1A-207ENST00000483538 LCE1FQ5T754 118 aa2.56□□□□□ -2
POLR1A-207ENST00000483538 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
POLR1A-207ENST00000483538 KRTAP6-2Q3LI66 62 aa2.55□□□□□ -2
POLR1A-207ENST00000483538 PRO0628Q9UI54 55 aa2.49□□□□□ -2.01
POLR1A-207ENST00000483538 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
POLR1A-207ENST00000483538 KTN1-AS1Q86SY8 53 aa2.38□□□□□ -2.03
POLR1A-207ENST00000483538 OBSCNQ5VST9 7968 aa2.36□□□□□ -2.03
POLR1A-207ENST00000483538 LUZP6Q538Z0 58 aa2.35□□□□□ -2.03
POLR1A-207ENST00000483538 KRTAP5-1Q6L8H4 278 aa2.33□□□□□ -2.04
POLR1A-207ENST00000483538 LCE1EQ5T753 118 aa2.29□□□□□ -2.04
POLR1A-207ENST00000483538 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
POLR1A-207ENST00000483538 MUC5ACP98088 5654 aa2.27□□□□□ -2.05
POLR1A-207ENST00000483538 AHNAKQ09666 5890 aaKnown RBP2.25□□□□□ -2.05
POLR1A-207ENST00000483538 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
POLR1A-207ENST00000483538 LCE3EQ5T5B0 92 aa2.2□□□□□ -2.06
POLR1A-207ENST00000483538 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
POLR1A-207ENST00000483538 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
POLR1A-207ENST00000483538 LCE3DQ9BYE3 92 aa2.07□□□□□ -2.08
POLR1A-207ENST00000483538 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
POLR1A-207ENST00000483538 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
POLR1A-207ENST00000483538 INE1O15225 51 aa1.57□□□□□ -2.16
POLR1A-207ENST00000483538 PRM1P04553 51 aa1.55□□□□□ -2.16
POLR1A-207ENST00000483538 MUC19Q7Z5P9 8384 aa1.44□□□□□ -2.18
POLR1A-207ENST00000483538 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
POLR1A-207ENST00000483538 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 62.8 ms