RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 SPRR2BP35325 72 aa6.68□□□□□ -1.34
CPNE1-224ENST00000483359 SPRR2AP35326 72 aa6.68□□□□□ -1.34
CPNE1-224ENST00000483359 KRTAP19-7Q3SYF9 63 aa6.67□□□□□ -1.34
CPNE1-224ENST00000483359 KRTAP19-5Q3LI72 72 aa6.64□□□□□ -1.35
CPNE1-224ENST00000483359 LCE1AQ5T7P2 110 aa6.62□□□□□ -1.35
CPNE1-224ENST00000483359 MT1EP04732 61 aa6.58□□□□□ -1.36
CPNE1-224ENST00000483359 SPRR2DP22532 72 aa6.45□□□□□ -1.38
CPNE1-224ENST00000483359 KRTAP19-3Q7Z4W3 81 aa6.44□□□□□ -1.38
CPNE1-224ENST00000483359 KRTAP12-3P60328 96 aa6.44□□□□□ -1.38
CPNE1-224ENST00000483359 LUZP6Q538Z0 58 aa6.42□□□□□ -1.38
CPNE1-224ENST00000483359 KRTAP23-1A1A580 65 aa6.38□□□□□ -1.39
CPNE1-224ENST00000483359 LCE5AQ5TCM9 118 aa6.38□□□□□ -1.39
CPNE1-224ENST00000483359 MT1LQ93083 61 aa6.37□□□□□ -1.39
CPNE1-224ENST00000483359 KRTAP20-1Q3LI63 56 aa6.37□□□□□ -1.39
CPNE1-224ENST00000483359 MT1GP13640 62 aa6.31□□□□□ -1.4
CPNE1-224ENST00000483359 KRTAP2-3P0C7H8 128 aa6.29□□□□□ -1.4
CPNE1-224ENST00000483359 PP632Q6XCG6 107 aa6.29□□□□□ -1.4
CPNE1-224ENST00000483359 KRTAP2-4Q9BYR9 128 aa6.29□□□□□ -1.4
CPNE1-224ENST00000483359 DSTQ03001 7570 aaKnown RBP6.27□□□□□ -1.41
CPNE1-224ENST00000483359 MT1MQ8N339 61 aa6.24□□□□□ -1.41
CPNE1-224ENST00000483359 LCE3BQ5TA77 95 aa6.23□□□□□ -1.41
CPNE1-224ENST00000483359 KRTAP4-7Q9BYR0 210 aa6.15□□□□□ -1.43
CPNE1-224ENST00000483359 KRTAP4-3Q9BYR4 195 aa6.14□□□□□ -1.43
CPNE1-224ENST00000483359 KRTAP2-2Q9BYT5 123 aa6.12□□□□□ -1.43
CPNE1-224ENST00000483359 KRTAP2-1Q9BYU5 128 aa6.12□□□□□ -1.43
CPNE1-224ENST00000483359 LCE3CQ5T5A8 94 aa5.97□□□□□ -1.45
CPNE1-224ENST00000483359 KRTAP19-4Q3LI73 84 aa5.95□□□□□ -1.46
CPNE1-224ENST00000483359 LOC100996750A0A140TA64 210 aa5.8□□□□□ -1.48
CPNE1-224ENST00000483359 KRTAP4-9Q9BYQ8 210 aa5.73□□□□□ -1.49
CPNE1-224ENST00000483359 LCE4AQ5TA78 99 aa5.67□□□□□ -1.5
CPNE1-224ENST00000483359 KRTAP5-5Q701N2 237 aaPredicted RBP5.66□□□□□ -1.5
CPNE1-224ENST00000483359 SPRR5A0A1B0GTR4 108 aa5.66□□□□□ -1.5
CPNE1-224ENST00000483359 KRTAP9-6A8MVA2 160 aa5.65□□□□□ -1.51
CPNE1-224ENST00000483359 KRTAP5-4Q6L8H1 288 aa5.65□□□□□ -1.51
CPNE1-224ENST00000483359 MT4P47944 62 aa5.64□□□□□ -1.51
CPNE1-224ENST00000483359 LCE1DQ5T752 114 aa5.61□□□□□ -1.51
CPNE1-224ENST00000483359 INE1O15225 51 aa5.56□□□□□ -1.52
CPNE1-224ENST00000483359 HMCN1Q96RW7 5635 aa5.53□□□□□ -1.52
CPNE1-224ENST00000483359 KRTAP4-6Q9BYQ5 205 aa5.51□□□□□ -1.53
CPNE1-224ENST00000483359 SYNE1Q8NF91 8797 aaKnown RBP5.49□□□□□ -1.53
CPNE1-224ENST00000483359 MT1AP04731 61 aa5.41□□□□□ -1.54
CPNE1-224ENST00000483359 KRTAP12-4P60329 112 aa5.4□□□□□ -1.55
CPNE1-224ENST00000483359 KRTAP6-1Q3LI64 71 aa5.39□□□□□ -1.55
CPNE1-224ENST00000483359 KRTAP20-2Q3LI61 65 aa5.34□□□□□ -1.55
CPNE1-224ENST00000483359 KRTAP9-4Q9BYQ2 154 aa5.18□□□□□ -1.58
CPNE1-224ENST00000483359 KRTAP5-3Q6L8H2 238 aa5.15□□□□□ -1.59
CPNE1-224ENST00000483359 AHNAK2Q8IVF2 5795 aa5.13□□□□□ -1.59
CPNE1-224ENST00000483359 GPR98Q8WXG9 6306 aa5.11□□□□□ -1.59
CPNE1-224ENST00000483359 KRTAP6-2Q3LI66 62 aa5.07□□□□□ -1.6
CPNE1-224ENST00000483359 KRTAP5-2Q701N4 177 aa5.02□□□□□ -1.61
CPNE1-224ENST00000483359 KRTAP5-10Q6L8G5 202 aa4.95□□□□□ -1.62
CPNE1-224ENST00000483359 MT3P25713 68 aa4.92□□□□□ -1.62
CPNE1-224ENST00000483359 OBSCNQ5VST9 7968 aa4.85□□□□□ -1.63
CPNE1-224ENST00000483359 KRTAP4-11Q9BYQ6 195 aa4.76□□□□□ -1.65
CPNE1-224ENST00000483359 KRTAP5-7Q6L8G8 165 aa4.66□□□□□ -1.66
CPNE1-224ENST00000483359 KRTAP5-8O75690 187 aa4.59□□□□□ -1.67
CPNE1-224ENST00000483359 KRTAP5-1Q6L8H4 278 aa4.45□□□□□ -1.7
CPNE1-224ENST00000483359 LCE3DQ9BYE3 92 aa4.39□□□□□ -1.71
CPNE1-224ENST00000483359 LCE1EQ5T753 118 aa4.37□□□□□ -1.71
CPNE1-224ENST00000483359 MUC5ACP98088 5654 aa4.34□□□□□ -1.72
CPNE1-224ENST00000483359 KRTAP9-9Q9BYP9 154 aa4.27□□□□□ -1.73
CPNE1-224ENST00000483359 LCE3EQ5T5B0 92 aa4.2□□□□□ -1.74
CPNE1-224ENST00000483359 LCE1BQ5T7P3 118 aa4.19□□□□□ -1.74
CPNE1-224ENST00000483359 MUC5BQ9HC84 5762 aaPredicted RBP4.16□□□□□ -1.74
CPNE1-224ENST00000483359 KRTAP4-2Q9BYR5 136 aa4.14□□□□□ -1.75
CPNE1-224ENST00000483359 LCE1CQ5T751 118 aa4.07□□□□□ -1.76
CPNE1-224ENST00000483359 AHNAKQ09666 5890 aaKnown RBP4.06□□□□□ -1.76
CPNE1-224ENST00000483359 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.74□□□□□ -1.81
CPNE1-224ENST00000483359 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.82
CPNE1-224ENST00000483359 PRM1P04553 51 aa3.65□□□□□ -1.83
CPNE1-224ENST00000483359 KRTAP4-12Q9BQ66 201 aa3.65□□□□□ -1.83
CPNE1-224ENST00000483359 KRTAP21-2Q3LI59 83 aa3.52□□□□□ -1.85
CPNE1-224ENST00000483359 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
CPNE1-224ENST00000483359 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
CPNE1-224ENST00000483359 PHGR1C9JFL3 82 aa3.16□□□□□ -1.9
CPNE1-224ENST00000483359 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
CPNE1-224ENST00000483359 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
CPNE1-224ENST00000483359 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms