RNA–Protein interactions for RNA: ENST00000483290.5

COMMD6-210, Transcript of COMM domain containing 6, humanhuman

TSL 2

Gene COMMD6, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-210ENST00000483290 HECTD4Q9Y4D8 3996 aa1.52□□□□□ -2.17
COMMD6-210ENST00000483290 STAB2Q8WWQ8 2551 aa1.51□□□□□ -2.17
COMMD6-210ENST00000483290 DNAH9Q9NYC9 4486 aa1.51□□□□□ -2.17
COMMD6-210ENST00000483290 RYR2Q92736 4967 aa1.5□□□□□ -2.17
COMMD6-210ENST00000483290 FLGP20930 4061 aaPredicted RBP1.5□□□□□ -2.17
COMMD6-210ENST00000483290 HSPG2P98160 4391 aa1.49□□□□□ -2.17
COMMD6-210ENST00000483290 PLECQ15149 4684 aaKnown RBP1.47□□□□□ -2.17
COMMD6-210ENST00000483290 DNAH17Q9UFH2 4485 aa1.46□□□□□ -2.17
COMMD6-210ENST00000483290 HERC2O95714 4834 aa1.46□□□□□ -2.18
COMMD6-210ENST00000483290 PKD1P98161 4303 aa1.46□□□□□ -2.18
COMMD6-210ENST00000483290 FAT2Q9NYQ8 4349 aa1.46□□□□□ -2.18
COMMD6-210ENST00000483290 DNAH6Q9C0G6 4158 aa1.44□□□□□ -2.18
COMMD6-210ENST00000483290 KRTAP19-5Q3LI72 72 aa1.44□□□□□ -2.18
COMMD6-210ENST00000483290 UBR4Q5T4S7 5183 aa1.43□□□□□ -2.18
COMMD6-210ENST00000483290 ABCA13Q86UQ4 5058 aa1.42□□□□□ -2.18
COMMD6-210ENST00000483290 STARD9Q9P2P6 4700 aa1.42□□□□□ -2.18
COMMD6-210ENST00000483290 KIAA1109Q2LD37 5005 aa1.42□□□□□ -2.18
COMMD6-210ENST00000483290 MT1AP04731 61 aa1.41□□□□□ -2.18
COMMD6-210ENST00000483290 DNAH5Q8TE73 4624 aa1.39□□□□□ -2.19
COMMD6-210ENST00000483290 HERC1Q15751 4861 aa1.38□□□□□ -2.19
COMMD6-210ENST00000483290 SPRR2DP22532 72 aa1.38□□□□□ -2.19
COMMD6-210ENST00000483290 LRP1Q07954 4544 aaKnown RBP1.37□□□□□ -2.19
COMMD6-210ENST00000483290 SPRR2BP35325 72 aa1.37□□□□□ -2.19
COMMD6-210ENST00000483290 KRTAP19-3Q7Z4W3 81 aa1.37□□□□□ -2.19
COMMD6-210ENST00000483290 PKHD1P08F94 4074 aa1.36□□□□□ -2.19
COMMD6-210ENST00000483290 SPRR2AP35326 72 aa1.35□□□□□ -2.19
COMMD6-210ENST00000483290 LPAP08519 4548 aa1.34□□□□□ -2.19
COMMD6-210ENST00000483290 KRTAP6-2Q3LI66 62 aa1.33□□□□□ -2.2
COMMD6-210ENST00000483290 DYNC1H1Q14204 4646 aaKnown RBP1.32□□□□□ -2.2
COMMD6-210ENST00000483290 RNF213Q63HN8 5207 aa1.32□□□□□ -2.2
COMMD6-210ENST00000483290 FSIP2Q5CZC0 6907 aa1.31□□□□□ -2.2
COMMD6-210ENST00000483290 FAT1Q14517 4588 aa1.3□□□□□ -2.2
COMMD6-210ENST00000483290 SPRR2FQ96RM1 72 aa1.29□□□□□ -2.2
COMMD6-210ENST00000483290 SPRR2GQ9BYE4 73 aa1.28□□□□□ -2.2
COMMD6-210ENST00000483290 MUC2Q02817 5179 aa1.25□□□□□ -2.21
COMMD6-210ENST00000483290 HMCN2Q8NDA2 5059 aa1.25□□□□□ -2.21
COMMD6-210ENST00000483290 MUC17Q685J3 4493 aa1.24□□□□□ -2.21
COMMD6-210ENST00000483290 LRP1BQ9NZR2 4599 aa1.23□□□□□ -2.21
COMMD6-210ENST00000483290 FAT4Q6V0I7 4981 aa1.22□□□□□ -2.21
COMMD6-210ENST00000483290 MT1EP04732 61 aa1.22□□□□□ -2.21
COMMD6-210ENST00000483290 SPRR2EP22531 72 aa1.22□□□□□ -2.21
COMMD6-210ENST00000483290 LRP2P98164 4655 aa1.2□□□□□ -2.22
COMMD6-210ENST00000483290 MT1LQ93083 61 aa1.17□□□□□ -2.22
COMMD6-210ENST00000483290 SYNE2Q8WXH0 6885 aaKnown RBP1.17□□□□□ -2.22
COMMD6-210ENST00000483290 SYNE1Q8NF91 8797 aaKnown RBP1.16□□□□□ -2.22
COMMD6-210ENST00000483290 MT1HL1P0DM35 61 aa1.15□□□□□ -2.23
COMMD6-210ENST00000483290 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
COMMD6-210ENST00000483290 MT1XP80297 61 aa1.13□□□□□ -2.23
COMMD6-210ENST00000483290 MT1HP80294 61 aa1.11□□□□□ -2.23
COMMD6-210ENST00000483290 KRTAP19-8Q3LI54 63 aa1.09□□□□□ -2.23
COMMD6-210ENST00000483290 MACF1Q9UPN3 7388 aaKnown RBP1.07□□□□□ -2.24
COMMD6-210ENST00000483290 NEBP20929 6669 aa1.06□□□□□ -2.24
COMMD6-210ENST00000483290 KRTAP20-1Q3LI63 56 aa1.05□□□□□ -2.24
COMMD6-210ENST00000483290 SSPOA2VEC9 5147 aa1.04□□□□□ -2.24
COMMD6-210ENST00000483290 USH2AO75445 5202 aa1.02□□□□□ -2.25
COMMD6-210ENST00000483290 KRTAP5-10Q6L8G5 202 aa1.01□□□□□ -2.25
COMMD6-210ENST00000483290 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
COMMD6-210ENST00000483290 MT1GP13640 62 aa0.98□□□□□ -2.25
COMMD6-210ENST00000483290 GPR98Q8WXG9 6306 aa0.97□□□□□ -2.25
COMMD6-210ENST00000483290 MUC12Q9UKN1 5478 aa0.97□□□□□ -2.25
COMMD6-210ENST00000483290 KRTAP19-7Q3SYF9 63 aa0.96□□□□□ -2.26
COMMD6-210ENST00000483290 KRTAP19-2Q3LHN2 52 aa0.95□□□□□ -2.26
COMMD6-210ENST00000483290 MT1BP07438 61 aa0.93□□□□□ -2.26
COMMD6-210ENST00000483290 KRTAP19-6Q3LI70 58 aa0.93□□□□□ -2.26
COMMD6-210ENST00000483290 KMT2DO14686 5537 aa0.9□□□□□ -2.26
COMMD6-210ENST00000483290 MDN1Q9NU22 5596 aa0.9□□□□□ -2.27
COMMD6-210ENST00000483290 MT2AP02795 61 aa0.88□□□□□ -2.27
COMMD6-210ENST00000483290 MT1FP04733 61 aa0.87□□□□□ -2.27
COMMD6-210ENST00000483290 AHNAK2Q8IVF2 5795 aa0.87□□□□□ -2.27
COMMD6-210ENST00000483290 DSTQ03001 7570 aaKnown RBP0.86□□□□□ -2.27
COMMD6-210ENST00000483290 MT1MQ8N339 61 aa0.85□□□□□ -2.27
COMMD6-210ENST00000483290 KRTAP6-1Q3LI64 71 aa0.84□□□□□ -2.27
COMMD6-210ENST00000483290 MT4P47944 62 aa0.76□□□□□ -2.29
COMMD6-210ENST00000483290 AHNAKQ09666 5890 aaKnown RBP0.73□□□□□ -2.29
COMMD6-210ENST00000483290 MUC5ACP98088 5654 aa0.71□□□□□ -2.3
COMMD6-210ENST00000483290 MUC5BQ9HC84 5762 aaPredicted RBP0.66□□□□□ -2.3
COMMD6-210ENST00000483290 KRTAP20-2Q3LI61 65 aa0.65□□□□□ -2.31
COMMD6-210ENST00000483290 PHGR1C9JFL3 82 aa0.51□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 11 ms