RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 TNP1P09430 55 aa5.75□□□□□ -1.49
RAB11FIP3-209ENST00000483002 KRTAP5-4Q6L8H1 288 aa5.73□□□□□ -1.49
RAB11FIP3-209ENST00000483002 KRTAP4-6Q9BYQ5 205 aa5.7□□□□□ -1.5
RAB11FIP3-209ENST00000483002 KRTAP5-10Q6L8G5 202 aa5.63□□□□□ -1.51
RAB11FIP3-209ENST00000483002 AHNAK2Q8IVF2 5795 aa5.63□□□□□ -1.51
RAB11FIP3-209ENST00000483002 KRTAP4-7Q9BYR0 210 aa5.62□□□□□ -1.51
RAB11FIP3-209ENST00000483002 ATP5EP56381 51 aaPredicted RBP5.57□□□□□ -1.52
RAB11FIP3-209ENST00000483002 KRTAP12-3P60328 96 aa5.56□□□□□ -1.52
RAB11FIP3-209ENST00000483002 TMEM258P61165 79 aa5.55□□□□□ -1.52
RAB11FIP3-209ENST00000483002 PRR15LQ9BU68 103 aa5.52□□□□□ -1.53
RAB11FIP3-209ENST00000483002 KRTAP5-3Q6L8H2 238 aa5.47□□□□□ -1.53
RAB11FIP3-209ENST00000483002 KRTAP20-2Q3LI61 65 aa5.44□□□□□ -1.54
RAB11FIP3-209ENST00000483002 KRTAP5-7Q6L8G8 165 aa5.43□□□□□ -1.54
RAB11FIP3-209ENST00000483002 PCP4P48539 62 aa5.41□□□□□ -1.54
RAB11FIP3-209ENST00000483002 KRTAP5-5Q701N2 237 aaPredicted RBP5.41□□□□□ -1.54
RAB11FIP3-209ENST00000483002 LINC01558Q9Y6Z2 57 aa5.41□□□□□ -1.54
RAB11FIP3-209ENST00000483002 SPRR5A0A1B0GTR4 108 aa5.38□□□□□ -1.55
RAB11FIP3-209ENST00000483002 KRTAP12-4P60329 112 aa5.36□□□□□ -1.55
RAB11FIP3-209ENST00000483002 UQCR11O14957 56 aa5.34□□□□□ -1.55
RAB11FIP3-209ENST00000483002 LOC100996750A0A140TA64 210 aa5.33□□□□□ -1.56
RAB11FIP3-209ENST00000483002 KRTAP25-1Q3LHN0 102 aa5.29□□□□□ -1.56
RAB11FIP3-209ENST00000483002 SYNE1Q8NF91 8797 aaKnown RBP5.2□□□□□ -1.58
RAB11FIP3-209ENST00000483002 PSPHP1O15172 72 aa5.2□□□□□ -1.58
RAB11FIP3-209ENST00000483002 MIR22HGQ0VDD5 57 aa5.2□□□□□ -1.58
RAB11FIP3-209ENST00000483002 Q1T7F1 81 aa5.19□□□□□ -1.58
RAB11FIP3-209ENST00000483002 KRTAP19-4Q3LI73 84 aa5.19□□□□□ -1.58
RAB11FIP3-209ENST00000483002 V9GYY9 64 aa5.17□□□□□ -1.58
RAB11FIP3-209ENST00000483002 K7ERS5 55 aa5.15□□□□□ -1.59
RAB11FIP3-209ENST00000483002 RPS28P62857 69 aaKnown RBP5.14□□□□□ -1.59
RAB11FIP3-209ENST00000483002 KRTAP15-1Q3LI76 137 aa5.12□□□□□ -1.59
RAB11FIP3-209ENST00000483002 LCE3CQ5T5A8 94 aa5.1□□□□□ -1.59
RAB11FIP3-209ENST00000483002 KRTAP23-1A1A580 65 aa5.06□□□□□ -1.6
RAB11FIP3-209ENST00000483002 KRTAP4-11Q9BYQ6 195 aa5.03□□□□□ -1.6
RAB11FIP3-209ENST00000483002 A6NED7 52 aa5□□□□□ -1.61
RAB11FIP3-209ENST00000483002 MT1AP04731 61 aa4.99□□□□□ -1.61
RAB11FIP3-209ENST00000483002 KRTAP6-1Q3LI64 71 aa4.99□□□□□ -1.61
RAB11FIP3-209ENST00000483002 KRTAP5-2Q701N4 177 aa4.98□□□□□ -1.61
RAB11FIP3-209ENST00000483002 KRTAP9-4Q9BYQ2 154 aa4.86□□□□□ -1.63
RAB11FIP3-209ENST00000483002 KRTAP5-8O75690 187 aa4.85□□□□□ -1.63
RAB11FIP3-209ENST00000483002 CDC42SE1Q9NRR8 79 aa4.84□□□□□ -1.63
RAB11FIP3-209ENST00000483002 KRTAP9-6A8MVA2 160 aa4.82□□□□□ -1.64
RAB11FIP3-209ENST00000483002 KRTAP6-2Q3LI66 62 aa4.82□□□□□ -1.64
RAB11FIP3-209ENST00000483002 ROMO1P60602 79 aa4.75□□□□□ -1.65
RAB11FIP3-209ENST00000483002 OBSCNQ5VST9 7968 aa4.74□□□□□ -1.65
RAB11FIP3-209ENST00000483002 MUC5ACP98088 5654 aa4.67□□□□□ -1.66
RAB11FIP3-209ENST00000483002 KRTAP9-9Q9BYP9 154 aa4.66□□□□□ -1.66
RAB11FIP3-209ENST00000483002 MUC5BQ9HC84 5762 aaPredicted RBP4.66□□□□□ -1.66
RAB11FIP3-209ENST00000483002 AHNAKQ09666 5890 aaKnown RBP4.65□□□□□ -1.67
RAB11FIP3-209ENST00000483002 BRK1Q8WUW1 75 aa4.61□□□□□ -1.67
RAB11FIP3-209ENST00000483002 MT3P25713 68 aa4.58□□□□□ -1.68
RAB11FIP3-209ENST00000483002 KRTAP5-1Q6L8H4 278 aa4.51□□□□□ -1.69
RAB11FIP3-209ENST00000483002 PMAIP1Q13794 54 aa4.33□□□□□ -1.72
RAB11FIP3-209ENST00000483002 LCE1EQ5T753 118 aa4.24□□□□□ -1.73
RAB11FIP3-209ENST00000483002 PRO0628Q9UI54 55 aa4.21□□□□□ -1.74
RAB11FIP3-209ENST00000483002 PRAC1Q96KF2 57 aa4.18□□□□□ -1.74
RAB11FIP3-209ENST00000483002 LCE1BQ5T7P3 118 aa4.06□□□□□ -1.76
RAB11FIP3-209ENST00000483002 KRTAP4-2Q9BYR5 136 aa4.03□□□□□ -1.76
RAB11FIP3-209ENST00000483002 KTN1-AS1Q86SY8 53 aa3.97□□□□□ -1.77
RAB11FIP3-209ENST00000483002 LCE1CQ5T751 118 aa3.94□□□□□ -1.78
RAB11FIP3-209ENST00000483002 SVIPQ8NHG7 77 aa3.81□□□□□ -1.8
RAB11FIP3-209ENST00000483002 KRTAP4-12Q9BQ66 201 aa3.79□□□□□ -1.8
RAB11FIP3-209ENST00000483002 LCE3DQ9BYE3 92 aa3.64□□□□□ -1.83
RAB11FIP3-209ENST00000483002 H3BS24 57 aa3.58□□□□□ -1.84
RAB11FIP3-209ENST00000483002 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
RAB11FIP3-209ENST00000483002 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
RAB11FIP3-209ENST00000483002 LCE1FQ5T754 118 aa3.53□□□□□ -1.84
RAB11FIP3-209ENST00000483002 LUZP6Q538Z0 58 aa3.38□□□□□ -1.87
RAB11FIP3-209ENST00000483002 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
RAB11FIP3-209ENST00000483002 PHGR1C9JFL3 82 aa3.31□□□□□ -1.88
RAB11FIP3-209ENST00000483002 KRTAP21-2Q3LI59 83 aa3.28□□□□□ -1.88
RAB11FIP3-209ENST00000483002 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
RAB11FIP3-209ENST00000483002 NDUFAF8A1L188 74 aa3.03□□□□□ -1.92
RAB11FIP3-209ENST00000483002 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
RAB11FIP3-209ENST00000483002 A0A0A0MQY5 61 aa2.56□□□□□ -2
RAB11FIP3-209ENST00000483002 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
RAB11FIP3-209ENST00000483002 PRM1P04553 51 aa2.44□□□□□ -2.02
RAB11FIP3-209ENST00000483002 INE1O15225 51 aa2.41□□□□□ -2.02
RAB11FIP3-209ENST00000483002 MUC16Q8WXI7 14507 aa2.05□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 107.3 ms