RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 A6NED7 52 aa6.13□□□□□ -1.43
HMGN1-214ENST00000482733 KRTAP19-5Q3LI72 72 aa6.12□□□□□ -1.43
HMGN1-214ENST00000482733 LCE3AQ5TA76 89 aa6.09□□□□□ -1.43
HMGN1-214ENST00000482733 KRTAP19-3Q7Z4W3 81 aa6.07□□□□□ -1.44
HMGN1-214ENST00000482733 LCE5AQ5TCM9 118 aa6.05□□□□□ -1.44
HMGN1-214ENST00000482733 KRTAP9-9Q9BYP9 154 aa6.05□□□□□ -1.44
HMGN1-214ENST00000482733 KRTAP9-4Q9BYQ2 154 aa6.05□□□□□ -1.44
HMGN1-214ENST00000482733 KRTAP2-2Q9BYT5 123 aa6.05□□□□□ -1.44
HMGN1-214ENST00000482733 KRTAP2-1Q9BYU5 128 aa6.05□□□□□ -1.44
HMGN1-214ENST00000482733 KRTAP25-1Q3LHN0 102 aa6.03□□□□□ -1.44
HMGN1-214ENST00000482733 MT1GP13640 62 aa5.97□□□□□ -1.45
HMGN1-214ENST00000482733 KRTAP19-4Q3LI73 84 aa5.96□□□□□ -1.46
HMGN1-214ENST00000482733 PP632Q6XCG6 107 aa5.94□□□□□ -1.46
HMGN1-214ENST00000482733 MT1LQ93083 61 aa5.92□□□□□ -1.46
HMGN1-214ENST00000482733 CDC42SE1Q9NRR8 79 aa5.9□□□□□ -1.46
HMGN1-214ENST00000482733 KRTAP12-3P60328 96 aa5.89□□□□□ -1.47
HMGN1-214ENST00000482733 KRTAP23-1A1A580 65 aa5.84□□□□□ -1.47
HMGN1-214ENST00000482733 MT1MQ8N339 61 aa5.84□□□□□ -1.47
HMGN1-214ENST00000482733 LCE1DQ5T752 114 aa5.82□□□□□ -1.48
HMGN1-214ENST00000482733 DSTQ03001 7570 aaKnown RBP5.79□□□□□ -1.48
HMGN1-214ENST00000482733 ROMO1P60602 79 aa5.79□□□□□ -1.48
HMGN1-214ENST00000482733 LCE4AQ5TA78 99 aa5.73□□□□□ -1.49
HMGN1-214ENST00000482733 KRTAP4-7Q9BYR0 210 aa5.72□□□□□ -1.49
HMGN1-214ENST00000482733 KRTAP4-3Q9BYR4 195 aa5.65□□□□□ -1.5
HMGN1-214ENST00000482733 KRTAP4-9Q9BYQ8 210 aa5.62□□□□□ -1.51
HMGN1-214ENST00000482733 KRTAP15-1Q3LI76 137 aa5.59□□□□□ -1.51
HMGN1-214ENST00000482733 BRK1Q8WUW1 75 aa5.5□□□□□ -1.53
HMGN1-214ENST00000482733 KRTAP4-2Q9BYR5 136 aa5.45□□□□□ -1.54
HMGN1-214ENST00000482733 LCE3CQ5T5A8 94 aa5.44□□□□□ -1.54
HMGN1-214ENST00000482733 KRTAP5-4Q6L8H1 288 aa5.44□□□□□ -1.54
HMGN1-214ENST00000482733 KRTAP4-11Q9BYQ6 195 aa5.44□□□□□ -1.54
HMGN1-214ENST00000482733 HMCN1Q96RW7 5635 aa5.39□□□□□ -1.55
HMGN1-214ENST00000482733 MT4P47944 62 aa5.38□□□□□ -1.55
HMGN1-214ENST00000482733 KRTAP5-5Q701N2 237 aaPredicted RBP5.34□□□□□ -1.55
HMGN1-214ENST00000482733 GPR98Q8WXG9 6306 aa5.2□□□□□ -1.58
HMGN1-214ENST00000482733 PMAIP1Q13794 54 aa5.2□□□□□ -1.58
HMGN1-214ENST00000482733 KRTAP12-4P60329 112 aa5.18□□□□□ -1.58
HMGN1-214ENST00000482733 SPRR5A0A1B0GTR4 108 aa5.15□□□□□ -1.59
HMGN1-214ENST00000482733 KRTAP20-2Q3LI61 65 aa5.12□□□□□ -1.59
HMGN1-214ENST00000482733 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
HMGN1-214ENST00000482733 AHNAK2Q8IVF2 5795 aa5.09□□□□□ -1.59
HMGN1-214ENST00000482733 KRTAP9-6A8MVA2 160 aa5.08□□□□□ -1.6
HMGN1-214ENST00000482733 MT1AP04731 61 aa5.05□□□□□ -1.6
HMGN1-214ENST00000482733 PRO0628Q9UI54 55 aa5□□□□□ -1.61
HMGN1-214ENST00000482733 KRTAP6-1Q3LI64 71 aa4.98□□□□□ -1.61
HMGN1-214ENST00000482733 KRTAP5-3Q6L8H2 238 aa4.95□□□□□ -1.62
HMGN1-214ENST00000482733 KRTAP5-10Q6L8G5 202 aa4.92□□□□□ -1.62
HMGN1-214ENST00000482733 PRAC1Q96KF2 57 aa4.91□□□□□ -1.62
HMGN1-214ENST00000482733 A0A0A0MQY5 61 aa4.81□□□□□ -1.64
HMGN1-214ENST00000482733 KRTAP5-2Q701N4 177 aa4.81□□□□□ -1.64
HMGN1-214ENST00000482733 KTN1-AS1Q86SY8 53 aa4.74□□□□□ -1.65
HMGN1-214ENST00000482733 KRTAP6-2Q3LI66 62 aa4.72□□□□□ -1.65
HMGN1-214ENST00000482733 KRTAP5-7Q6L8G8 165 aa4.71□□□□□ -1.66
HMGN1-214ENST00000482733 MT3P25713 68 aa4.63□□□□□ -1.67
HMGN1-214ENST00000482733 KRTAP5-8O75690 187 aa4.44□□□□□ -1.7
HMGN1-214ENST00000482733 OBSCNQ5VST9 7968 aa4.38□□□□□ -1.71
HMGN1-214ENST00000482733 KRTAP5-1Q6L8H4 278 aa4.26□□□□□ -1.73
HMGN1-214ENST00000482733 MUC5ACP98088 5654 aa4.24□□□□□ -1.73
HMGN1-214ENST00000482733 LCE1EQ5T753 118 aa4.21□□□□□ -1.74
HMGN1-214ENST00000482733 LUZP6Q538Z0 58 aa4.2□□□□□ -1.74
HMGN1-214ENST00000482733 MUC5BQ9HC84 5762 aaPredicted RBP4.18□□□□□ -1.74
HMGN1-214ENST00000482733 AHNAKQ09666 5890 aaKnown RBP4.15□□□□□ -1.74
HMGN1-214ENST00000482733 LCE3DQ9BYE3 92 aa3.98□□□□□ -1.77
HMGN1-214ENST00000482733 LCE1BQ5T7P3 118 aa3.9□□□□□ -1.79
HMGN1-214ENST00000482733 LCE1CQ5T751 118 aa3.89□□□□□ -1.79
HMGN1-214ENST00000482733 LCE3EQ5T5B0 92 aa3.79□□□□□ -1.8
HMGN1-214ENST00000482733 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
HMGN1-214ENST00000482733 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
HMGN1-214ENST00000482733 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
HMGN1-214ENST00000482733 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
HMGN1-214ENST00000482733 KRTAP21-2Q3LI59 83 aa3.28□□□□□ -1.88
HMGN1-214ENST00000482733 INE1O15225 51 aa3.08□□□□□ -1.92
HMGN1-214ENST00000482733 PHGR1C9JFL3 82 aa3.01□□□□□ -1.93
HMGN1-214ENST00000482733 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
HMGN1-214ENST00000482733 PRM1P04553 51 aa2.95□□□□□ -1.94
HMGN1-214ENST00000482733 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
HMGN1-214ENST00000482733 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
HMGN1-214ENST00000482733 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 13 ms