RNA–Protein interactions for RNA: ENST00000482395.1

TRA2A-206, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-206ENST00000482395 KRTAP19-5Q3LI72 72 aa7.56□□□□□ -1.2
TRA2A-206ENST00000482395 LINC01558Q9Y6Z2 57 aa7.54□□□□□ -1.2
TRA2A-206ENST00000482395 DSTQ03001 7570 aaKnown RBP7.53□□□□□ -1.2
TRA2A-206ENST00000482395 TNP1P09430 55 aa7.52□□□□□ -1.21
TRA2A-206ENST00000482395 MT1GP13640 62 aa7.52□□□□□ -1.21
TRA2A-206ENST00000482395 PP632Q6XCG6 107 aa7.49□□□□□ -1.21
TRA2A-206ENST00000482395 TMEM258P61165 79 aa7.48□□□□□ -1.21
TRA2A-206ENST00000482395 C10orf95Q9H7T3 257 aa7.47□□□□□ -1.21
TRA2A-206ENST00000482395 KRTAP15-1Q3LI76 137 aa7.45□□□□□ -1.22
TRA2A-206ENST00000482395 LCE3AQ5TA76 89 aa7.41□□□□□ -1.22
TRA2A-206ENST00000482395 UQCR11O14957 56 aa7.39□□□□□ -1.23
TRA2A-206ENST00000482395 MT1LQ93083 61 aa7.38□□□□□ -1.23
TRA2A-206ENST00000482395 KRTAP4-7Q9BYR0 210 aa7.37□□□□□ -1.23
TRA2A-206ENST00000482395 MT1MQ8N339 61 aa7.35□□□□□ -1.23
TRA2A-206ENST00000482395 KRTAP4-9Q9BYQ8 210 aa7.34□□□□□ -1.23
TRA2A-206ENST00000482395 MIR22HGQ0VDD5 57 aa7.19□□□□□ -1.26
TRA2A-206ENST00000482395 KRTAP4-11Q9BYQ6 195 aa7.17□□□□□ -1.26
TRA2A-206ENST00000482395 KRTAP12-3P60328 96 aa7.15□□□□□ -1.26
TRA2A-206ENST00000482395 V9GYY9 64 aa7.14□□□□□ -1.27
TRA2A-206ENST00000482395 A0A0A0MQY5 61 aa7.12□□□□□ -1.27
TRA2A-206ENST00000482395 K7ERS5 55 aa7.12□□□□□ -1.27
TRA2A-206ENST00000482395 KRTAP25-1Q3LHN0 102 aa7.1□□□□□ -1.27
TRA2A-206ENST00000482395 KRTAP5-10Q6L8G5 202 aa7.09□□□□□ -1.27
TRA2A-206ENST00000482395 KRTAP4-3Q9BYR4 195 aa7.09□□□□□ -1.27
TRA2A-206ENST00000482395 HMCN1Q96RW7 5635 aa7.07□□□□□ -1.28
TRA2A-206ENST00000482395 AHNAK2Q8IVF2 5795 aa7.05□□□□□ -1.28
TRA2A-206ENST00000482395 MT4P47944 62 aa7.03□□□□□ -1.28
TRA2A-206ENST00000482395 Q1T7F1 81 aa7.03□□□□□ -1.28
TRA2A-206ENST00000482395 KRTAP5-4Q6L8H1 288 aa7.03□□□□□ -1.28
TRA2A-206ENST00000482395 KRTAP4-2Q9BYR5 136 aa7.03□□□□□ -1.28
TRA2A-206ENST00000482395 PSPHP1O15172 72 aa6.99□□□□□ -1.29
TRA2A-206ENST00000482395 KRTAP5-7Q6L8G8 165 aa6.98□□□□□ -1.29
TRA2A-206ENST00000482395 SPRR5A0A1B0GTR4 108 aa6.89□□□□□ -1.31
TRA2A-206ENST00000482395 RPS28P62857 69 aaKnown RBP6.88□□□□□ -1.31
TRA2A-206ENST00000482395 PRO0628Q9UI54 55 aa6.81□□□□□ -1.32
TRA2A-206ENST00000482395 A6NED7 52 aa6.8□□□□□ -1.32
TRA2A-206ENST00000482395 KRTAP5-5Q701N2 237 aaPredicted RBP6.74□□□□□ -1.33
TRA2A-206ENST00000482395 CDC42SE1Q9NRR8 79 aa6.71□□□□□ -1.34
TRA2A-206ENST00000482395 KRTAP5-3Q6L8H2 238 aa6.67□□□□□ -1.34
TRA2A-206ENST00000482395 KRTAP20-2Q3LI61 65 aa6.62□□□□□ -1.35
TRA2A-206ENST00000482395 KRTAP12-4P60329 112 aa6.61□□□□□ -1.35
TRA2A-206ENST00000482395 LCE3CQ5T5A8 94 aa6.58□□□□□ -1.36
TRA2A-206ENST00000482395 ROMO1P60602 79 aa6.57□□□□□ -1.36
TRA2A-206ENST00000482395 SYNE1Q8NF91 8797 aaKnown RBP6.51□□□□□ -1.37
TRA2A-206ENST00000482395 PMAIP1Q13794 54 aa6.47□□□□□ -1.37
TRA2A-206ENST00000482395 MT1AP04731 61 aa6.3□□□□□ -1.4
TRA2A-206ENST00000482395 BRK1Q8WUW1 75 aa6.3□□□□□ -1.4
TRA2A-206ENST00000482395 KRTAP6-1Q3LI64 71 aa6.22□□□□□ -1.41
TRA2A-206ENST00000482395 AHNAKQ09666 5890 aaKnown RBP6.18□□□□□ -1.42
TRA2A-206ENST00000482395 KRTAP9-6A8MVA2 160 aa6.15□□□□□ -1.42
TRA2A-206ENST00000482395 KRTAP5-2Q701N4 177 aa6.15□□□□□ -1.42
TRA2A-206ENST00000482395 KTN1-AS1Q86SY8 53 aa6.15□□□□□ -1.42
TRA2A-206ENST00000482395 MUC5ACP98088 5654 aa6.08□□□□□ -1.44
TRA2A-206ENST00000482395 MUC5BQ9HC84 5762 aaPredicted RBP5.95□□□□□ -1.46
TRA2A-206ENST00000482395 KRTAP6-2Q3LI66 62 aa5.94□□□□□ -1.46
TRA2A-206ENST00000482395 PRAC1Q96KF2 57 aa5.92□□□□□ -1.46
TRA2A-206ENST00000482395 KRTAP5-8O75690 187 aa5.83□□□□□ -1.48
TRA2A-206ENST00000482395 MT3P25713 68 aa5.83□□□□□ -1.48
TRA2A-206ENST00000482395 OBSCNQ5VST9 7968 aa5.76□□□□□ -1.49
TRA2A-206ENST00000482395 NDUFAF8A1L188 74 aa5.63□□□□□ -1.51
TRA2A-206ENST00000482395 KRTAP5-1Q6L8H4 278 aa5.5□□□□□ -1.53
TRA2A-206ENST00000482395 LCE1EQ5T753 118 aa5.32□□□□□ -1.56
TRA2A-206ENST00000482395 LCE1FQ5T754 118 aa5.28□□□□□ -1.56
TRA2A-206ENST00000482395 LUZP6Q538Z0 58 aa5.12□□□□□ -1.59
TRA2A-206ENST00000482395 LCE1BQ5T7P3 118 aa4.94□□□□□ -1.62
TRA2A-206ENST00000482395 LCE1CQ5T751 118 aa4.93□□□□□ -1.62
TRA2A-206ENST00000482395 KRTAP5-11Q6L8G4 156 aa4.82□□□□□ -1.64
TRA2A-206ENST00000482395 LCE3DQ9BYE3 92 aa4.76□□□□□ -1.65
TRA2A-206ENST00000482395 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.63□□□□□ -1.67
TRA2A-206ENST00000482395 LCE3EQ5T5B0 92 aa4.54□□□□□ -1.68
TRA2A-206ENST00000482395 INE1O15225 51 aa4.25□□□□□ -1.73
TRA2A-206ENST00000482395 PHGR1C9JFL3 82 aa4.22□□□□□ -1.73
TRA2A-206ENST00000482395 KRTAP21-2Q3LI59 83 aa4.1□□□□□ -1.75
TRA2A-206ENST00000482395 KRTAP4-4Q9BYR3 166 aa3.84□□□□□ -1.79
TRA2A-206ENST00000482395 MUC19Q7Z5P9 8384 aa3.55□□□□□ -1.84
TRA2A-206ENST00000482395 PRM1P04553 51 aa3.33□□□□□ -1.88
TRA2A-206ENST00000482395 KRTAP21-1Q3LI58 79 aa3.22□□□□□ -1.89
TRA2A-206ENST00000482395 MUC16Q8WXI7 14507 aa2.53□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 50.3 ms