RNA–Protein interactions for RNA: ENST00000482320.5

TNPO3-204, Transcript of transportin 3, humanhuman

TSL 1 (best) BASIC

Gene TNPO3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-204ENST00000482320 SYNE2Q8WXH0 6885 aaKnown RBP3.02□□□□□ -1.93
TNPO3-204ENST00000482320 KRTAP19-5Q3LI72 72 aa2.98□□□□□ -1.93
TNPO3-204ENST00000482320 SPRR2FQ96RM1 72 aa2.97□□□□□ -1.93
TNPO3-204ENST00000482320 LCE3CQ5T5A8 94 aa2.95□□□□□ -1.94
TNPO3-204ENST00000482320 KRTAP9-6A8MVA2 160 aa2.92□□□□□ -1.94
TNPO3-204ENST00000482320 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.91□□□□□ -1.94
TNPO3-204ENST00000482320 KRTAP2-3P0C7H8 128 aa2.88□□□□□ -1.95
TNPO3-204ENST00000482320 KRTAP2-4Q9BYR9 128 aa2.88□□□□□ -1.95
TNPO3-204ENST00000482320 KRTAP2-1Q9BYU5 128 aa2.88□□□□□ -1.95
TNPO3-204ENST00000482320 MUC12Q9UKN1 5478 aa2.88□□□□□ -1.95
TNPO3-204ENST00000482320 KRTAP9-7A8MTY7 169 aa2.84□□□□□ -1.95
TNPO3-204ENST00000482320 KRTAP19-7Q3SYF9 63 aa2.83□□□□□ -1.96
TNPO3-204ENST00000482320 SPRR2EP22531 72 aa2.82□□□□□ -1.96
TNPO3-204ENST00000482320 SPRR2BP35325 72 aa2.82□□□□□ -1.96
TNPO3-204ENST00000482320 SPRR2AP35326 72 aa2.82□□□□□ -1.96
TNPO3-204ENST00000482320 MT1EP04732 61 aa2.81□□□□□ -1.96
TNPO3-204ENST00000482320 LOC100996750A0A140TA64 210 aa2.8□□□□□ -1.96
TNPO3-204ENST00000482320 KRTAP6-3Q3LI67 103 aa2.78□□□□□ -1.96
TNPO3-204ENST00000482320 KRTAP4-3Q9BYR4 195 aa2.76□□□□□ -1.97
TNPO3-204ENST00000482320 KRTAP12-4P60329 112 aa2.75□□□□□ -1.97
TNPO3-204ENST00000482320 MT1LQ93083 61 aa2.75□□□□□ -1.97
TNPO3-204ENST00000482320 KRTAP19-3Q7Z4W3 81 aa2.75□□□□□ -1.97
TNPO3-204ENST00000482320 MDN1Q9NU22 5596 aa2.75□□□□□ -1.97
TNPO3-204ENST00000482320 MT1GP13640 62 aa2.72□□□□□ -1.97
TNPO3-204ENST00000482320 KRTAP5-9P26371 169 aa2.72□□□□□ -1.97
TNPO3-204ENST00000482320 KRTAP4-9Q9BYQ8 210 aa2.71□□□□□ -1.97
TNPO3-204ENST00000482320 SPRR2DP22532 72 aa2.71□□□□□ -1.98
TNPO3-204ENST00000482320 LCE1AQ5T7P2 110 aa2.71□□□□□ -1.98
TNPO3-204ENST00000482320 LCE5AQ5TCM9 118 aa2.7□□□□□ -1.98
TNPO3-204ENST00000482320 MT1MQ8N339 61 aa2.67□□□□□ -1.98
TNPO3-204ENST00000482320 LCE1EQ5T753 118 aa2.66□□□□□ -1.98
TNPO3-204ENST00000482320 LCE3BQ5TA77 95 aa2.66□□□□□ -1.98
TNPO3-204ENST00000482320 KRTAP5-5Q701N2 237 aaPredicted RBP2.62□□□□□ -1.99
TNPO3-204ENST00000482320 KRTAP9-4Q9BYQ2 154 aa2.62□□□□□ -1.99
TNPO3-204ENST00000482320 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
TNPO3-204ENST00000482320 NEBP20929 6669 aa2.61□□□□□ -1.99
TNPO3-204ENST00000482320 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
TNPO3-204ENST00000482320 KRTAP9-9Q9BYP9 154 aa2.58□□□□□ -2
TNPO3-204ENST00000482320 MT1AP04731 61 aa2.52□□□□□ -2.01
TNPO3-204ENST00000482320 KRTAP20-1Q3LI63 56 aa2.51□□□□□ -2.01
TNPO3-204ENST00000482320 PRM1P04553 51 aa2.5□□□□□ -2.01
TNPO3-204ENST00000482320 KRTAP2-2Q9BYT5 123 aa2.49□□□□□ -2.01
TNPO3-204ENST00000482320 LCE1DQ5T752 114 aa2.47□□□□□ -2.01
TNPO3-204ENST00000482320 LCE3EQ5T5B0 92 aa2.45□□□□□ -2.02
TNPO3-204ENST00000482320 MT4P47944 62 aa2.42□□□□□ -2.02
TNPO3-204ENST00000482320 LCE4AQ5TA78 99 aa2.4□□□□□ -2.03
TNPO3-204ENST00000482320 LCE3DQ9BYE3 92 aa2.38□□□□□ -2.03
TNPO3-204ENST00000482320 KRTAP6-1Q3LI64 71 aa2.34□□□□□ -2.03
TNPO3-204ENST00000482320 KRTAP5-4Q6L8H1 288 aa2.33□□□□□ -2.04
TNPO3-204ENST00000482320 KRTAP4-6Q9BYQ5 205 aa2.29□□□□□ -2.04
TNPO3-204ENST00000482320 KRTAP5-2Q701N4 177 aa2.27□□□□□ -2.05
TNPO3-204ENST00000482320 KRTAP6-2Q3LI66 62 aa2.26□□□□□ -2.05
TNPO3-204ENST00000482320 HMCN1Q96RW7 5635 aa2.2□□□□□ -2.06
TNPO3-204ENST00000482320 MT3P25713 68 aa2.18□□□□□ -2.06
TNPO3-204ENST00000482320 KRTAP20-2Q3LI61 65 aa2.18□□□□□ -2.06
TNPO3-204ENST00000482320 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.07
TNPO3-204ENST00000482320 KRTAP5-1Q6L8H4 278 aa2.08□□□□□ -2.08
TNPO3-204ENST00000482320 KRTAP4-12Q9BQ66 201 aa2.07□□□□□ -2.08
TNPO3-204ENST00000482320 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
TNPO3-204ENST00000482320 KRTAP5-10Q6L8G5 202 aa2.04□□□□□ -2.08
TNPO3-204ENST00000482320 KRTAP5-3Q6L8H2 238 aa2.02□□□□□ -2.09
TNPO3-204ENST00000482320 GPR98Q8WXG9 6306 aa1.98□□□□□ -2.09
TNPO3-204ENST00000482320 KRTAP4-11Q9BYQ6 195 aa1.96□□□□□ -2.1
TNPO3-204ENST00000482320 LCE1BQ5T7P3 118 aa1.93□□□□□ -2.1
TNPO3-204ENST00000482320 AHNAK2Q8IVF2 5795 aa1.92□□□□□ -2.1
TNPO3-204ENST00000482320 KRTAP5-8O75690 187 aa1.89□□□□□ -2.11
TNPO3-204ENST00000482320 MUC5ACP98088 5654 aa1.86□□□□□ -2.11
TNPO3-204ENST00000482320 LCE1CQ5T751 118 aa1.77□□□□□ -2.13
TNPO3-204ENST00000482320 KRTAP4-4Q9BYR3 166 aa1.7□□□□□ -2.14
TNPO3-204ENST00000482320 KRTAP4-2Q9BYR5 136 aa1.69□□□□□ -2.14
TNPO3-204ENST00000482320 MUC5BQ9HC84 5762 aaPredicted RBP1.67□□□□□ -2.14
TNPO3-204ENST00000482320 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
TNPO3-204ENST00000482320 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
TNPO3-204ENST00000482320 KRTAP5-11Q6L8G4 156 aa1.56□□□□□ -2.16
TNPO3-204ENST00000482320 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
TNPO3-204ENST00000482320 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
TNPO3-204ENST00000482320 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms