RNA–Protein interactions for RNA: ENST00000482110.5

PBX1-208, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-208ENST00000482110 PP632Q6XCG6 107 aa8.08□□□□□ -1.12
PBX1-208ENST00000482110 MT1LQ93083 61 aa8.03□□□□□ -1.12
PBX1-208ENST00000482110 DSTQ03001 7570 aaKnown RBP8.03□□□□□ -1.12
PBX1-208ENST00000482110 KRTAP25-1Q3LHN0 102 aa7.96□□□□□ -1.14
PBX1-208ENST00000482110 MT1MQ8N339 61 aa7.95□□□□□ -1.14
PBX1-208ENST00000482110 A6NED7 52 aa7.89□□□□□ -1.15
PBX1-208ENST00000482110 KRTAP12-3P60328 96 aa7.89□□□□□ -1.15
PBX1-208ENST00000482110 RPS28P62857 69 aaKnown RBP7.89□□□□□ -1.15
PBX1-208ENST00000482110 PCP4P48539 62 aa7.87□□□□□ -1.15
PBX1-208ENST00000482110 KRTAP4-3Q9BYR4 195 aa7.7□□□□□ -1.18
PBX1-208ENST00000482110 KRTAP23-1A1A580 65 aa7.69□□□□□ -1.18
PBX1-208ENST00000482110 KRTAP4-9Q9BYQ8 210 aa7.65□□□□□ -1.18
PBX1-208ENST00000482110 CDC42SE1Q9NRR8 79 aa7.65□□□□□ -1.18
PBX1-208ENST00000482110 LCE4AQ5TA78 99 aa7.63□□□□□ -1.19
PBX1-208ENST00000482110 KRTAP4-7Q9BYR0 210 aa7.58□□□□□ -1.2
PBX1-208ENST00000482110 KRTAP19-4Q3LI73 84 aa7.55□□□□□ -1.2
PBX1-208ENST00000482110 ROMO1P60602 79 aa7.53□□□□□ -1.2
PBX1-208ENST00000482110 LCE1DQ5T752 114 aa7.53□□□□□ -1.2
PBX1-208ENST00000482110 KRTAP5-4Q6L8H1 288 aa7.5□□□□□ -1.21
PBX1-208ENST00000482110 MT4P47944 62 aa7.46□□□□□ -1.22
PBX1-208ENST00000482110 KRTAP15-1Q3LI76 137 aa7.44□□□□□ -1.22
PBX1-208ENST00000482110 HMCN1Q96RW7 5635 aa7.42□□□□□ -1.22
PBX1-208ENST00000482110 GPR98Q8WXG9 6306 aa7.37□□□□□ -1.23
PBX1-208ENST00000482110 KRTAP5-5Q701N2 237 aaPredicted RBP7.28□□□□□ -1.24
PBX1-208ENST00000482110 LCE3CQ5T5A8 94 aa7.27□□□□□ -1.25
PBX1-208ENST00000482110 KRTAP4-6Q9BYQ5 205 aa7.26□□□□□ -1.25
PBX1-208ENST00000482110 LOC100996750A0A140TA64 210 aa7.17□□□□□ -1.26
PBX1-208ENST00000482110 AHNAK2Q8IVF2 5795 aa7.1□□□□□ -1.27
PBX1-208ENST00000482110 KRTAP12-4P60329 112 aa7.09□□□□□ -1.27
PBX1-208ENST00000482110 SPRR5A0A1B0GTR4 108 aa7.08□□□□□ -1.28
PBX1-208ENST00000482110 KRTAP20-2Q3LI61 65 aa7.05□□□□□ -1.28
PBX1-208ENST00000482110 SYNE1Q8NF91 8797 aaKnown RBP6.97□□□□□ -1.29
PBX1-208ENST00000482110 KRTAP5-10Q6L8G5 202 aa6.92□□□□□ -1.3
PBX1-208ENST00000482110 BRK1Q8WUW1 75 aa6.92□□□□□ -1.3
PBX1-208ENST00000482110 MT1AP04731 61 aa6.85□□□□□ -1.31
PBX1-208ENST00000482110 KRTAP5-3Q6L8H2 238 aa6.83□□□□□ -1.32
PBX1-208ENST00000482110 KRTAP9-6A8MVA2 160 aa6.81□□□□□ -1.32
PBX1-208ENST00000482110 KRTAP6-1Q3LI64 71 aa6.76□□□□□ -1.33
PBX1-208ENST00000482110 KRTAP5-7Q6L8G8 165 aa6.65□□□□□ -1.34
PBX1-208ENST00000482110 KRTAP5-2Q701N4 177 aa6.6□□□□□ -1.35
PBX1-208ENST00000482110 KRTAP9-4Q9BYQ2 154 aa6.59□□□□□ -1.35
PBX1-208ENST00000482110 PMAIP1Q13794 54 aa6.52□□□□□ -1.37
PBX1-208ENST00000482110 KRTAP6-2Q3LI66 62 aa6.43□□□□□ -1.38
PBX1-208ENST00000482110 KRTAP4-11Q9BYQ6 195 aa6.4□□□□□ -1.38
PBX1-208ENST00000482110 MT3P25713 68 aa6.27□□□□□ -1.41
PBX1-208ENST00000482110 PRAC1Q96KF2 57 aa6.21□□□□□ -1.42
PBX1-208ENST00000482110 KRTAP5-8O75690 187 aa6.17□□□□□ -1.42
PBX1-208ENST00000482110 PRO0628Q9UI54 55 aa6.15□□□□□ -1.42
PBX1-208ENST00000482110 OBSCNQ5VST9 7968 aa6.06□□□□□ -1.44
PBX1-208ENST00000482110 KRTAP5-1Q6L8H4 278 aa5.87□□□□□ -1.47
PBX1-208ENST00000482110 KTN1-AS1Q86SY8 53 aa5.87□□□□□ -1.47
PBX1-208ENST00000482110 KRTAP9-9Q9BYP9 154 aa5.85□□□□□ -1.47
PBX1-208ENST00000482110 MUC5BQ9HC84 5762 aaPredicted RBP5.82□□□□□ -1.48
PBX1-208ENST00000482110 AHNAKQ09666 5890 aaKnown RBP5.8□□□□□ -1.48
PBX1-208ENST00000482110 MUC5ACP98088 5654 aa5.79□□□□□ -1.48
PBX1-208ENST00000482110 LCE1EQ5T753 118 aa5.73□□□□□ -1.49
PBX1-208ENST00000482110 SVIPQ8NHG7 77 aa5.61□□□□□ -1.51
PBX1-208ENST00000482110 KRTAP4-2Q9BYR5 136 aa5.35□□□□□ -1.55
PBX1-208ENST00000482110 LCE1BQ5T7P3 118 aa5.33□□□□□ -1.56
PBX1-208ENST00000482110 LUZP6Q538Z0 58 aa5.32□□□□□ -1.56
PBX1-208ENST00000482110 LCE1CQ5T751 118 aa5.31□□□□□ -1.56
PBX1-208ENST00000482110 LCE3DQ9BYE3 92 aa5.29□□□□□ -1.56
PBX1-208ENST00000482110 LCE3EQ5T5B0 92 aa5.01□□□□□ -1.61
PBX1-208ENST00000482110 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.86□□□□□ -1.63
PBX1-208ENST00000482110 KRTAP5-11Q6L8G4 156 aa4.8□□□□□ -1.64
PBX1-208ENST00000482110 KRTAP4-12Q9BQ66 201 aa4.74□□□□□ -1.65
PBX1-208ENST00000482110 LCE1FQ5T754 118 aa4.65□□□□□ -1.67
PBX1-208ENST00000482110 KRTAP21-2Q3LI59 83 aa4.46□□□□□ -1.7
PBX1-208ENST00000482110 NDUFAF8A1L188 74 aa4.31□□□□□ -1.72
PBX1-208ENST00000482110 PHGR1C9JFL3 82 aa4.12□□□□□ -1.75
PBX1-208ENST00000482110 H3BS24 57 aa4.02□□□□□ -1.77
PBX1-208ENST00000482110 KRTAP4-4Q9BYR3 166 aa4.01□□□□□ -1.77
PBX1-208ENST00000482110 PRM1P04553 51 aa3.83□□□□□ -1.8
PBX1-208ENST00000482110 MUC19Q7Z5P9 8384 aa3.74□□□□□ -1.81
PBX1-208ENST00000482110 INE1O15225 51 aa3.54□□□□□ -1.84
PBX1-208ENST00000482110 A0A0A0MQY5 61 aa3.5□□□□□ -1.85
PBX1-208ENST00000482110 KRTAP21-1Q3LI58 79 aa3.08□□□□□ -1.92
PBX1-208ENST00000482110 MUC16Q8WXI7 14507 aa2.69□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 1106 ms