RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 MT1EP04732 61 aa5.63□□□□□ -1.51
RXRA-202ENST00000481739 SPRR2FQ96RM1 72 aa5.62□□□□□ -1.51
RXRA-202ENST00000481739 MUC12Q9UKN1 5478 aa5.58□□□□□ -1.52
RXRA-202ENST00000481739 MT1LQ93083 61 aa5.56□□□□□ -1.52
RXRA-202ENST00000481739 KRTAP9-7A8MTY7 169 aa5.52□□□□□ -1.53
RXRA-202ENST00000481739 KRTAP5-9P26371 169 aa5.51□□□□□ -1.53
RXRA-202ENST00000481739 KRTAP6-3Q3LI67 103 aa5.48□□□□□ -1.53
RXRA-202ENST00000481739 MDN1Q9NU22 5596 aa5.45□□□□□ -1.54
RXRA-202ENST00000481739 KRTAP19-3Q7Z4W3 81 aa5.41□□□□□ -1.54
RXRA-202ENST00000481739 MT1GP13640 62 aa5.37□□□□□ -1.55
RXRA-202ENST00000481739 SPRR2EP22531 72 aa5.36□□□□□ -1.55
RXRA-202ENST00000481739 SPRR2BP35325 72 aa5.36□□□□□ -1.55
RXRA-202ENST00000481739 SPRR2AP35326 72 aa5.36□□□□□ -1.55
RXRA-202ENST00000481739 KRTAP4-7Q9BYR0 210 aa5.34□□□□□ -1.55
RXRA-202ENST00000481739 LCE1AQ5T7P2 110 aa5.34□□□□□ -1.55
RXRA-202ENST00000481739 KRTAP9-6A8MVA2 160 aa5.32□□□□□ -1.56
RXRA-202ENST00000481739 LCE5AQ5TCM9 118 aa5.31□□□□□ -1.56
RXRA-202ENST00000481739 MT1MQ8N339 61 aa5.3□□□□□ -1.56
RXRA-202ENST00000481739 NEBP20929 6669 aa5.23□□□□□ -1.57
RXRA-202ENST00000481739 KRTAP4-3Q9BYR4 195 aa5.22□□□□□ -1.57
RXRA-202ENST00000481739 SPRR2DP22532 72 aa5.16□□□□□ -1.58
RXRA-202ENST00000481739 DSTQ03001 7570 aaKnown RBP5.12□□□□□ -1.59
RXRA-202ENST00000481739 KRTAP2-3P0C7H8 128 aa5.1□□□□□ -1.59
RXRA-202ENST00000481739 KRTAP2-4Q9BYR9 128 aa5.1□□□□□ -1.59
RXRA-202ENST00000481739 KRTAP2-1Q9BYU5 128 aa5.1□□□□□ -1.59
RXRA-202ENST00000481739 INE1O15225 51 aa5.03□□□□□ -1.6
RXRA-202ENST00000481739 LOC100996750A0A140TA64 210 aa5.02□□□□□ -1.61
RXRA-202ENST00000481739 LCE3BQ5TA77 95 aa4.95□□□□□ -1.62
RXRA-202ENST00000481739 KRTAP20-1Q3LI63 56 aa4.79□□□□□ -1.64
RXRA-202ENST00000481739 MT1AP04731 61 aa4.74□□□□□ -1.65
RXRA-202ENST00000481739 KRTAP5-5Q701N2 237 aaPredicted RBP4.74□□□□□ -1.65
RXRA-202ENST00000481739 KRTAP2-2Q9BYT5 123 aa4.72□□□□□ -1.65
RXRA-202ENST00000481739 KRTAP6-1Q3LI64 71 aa4.65□□□□□ -1.66
RXRA-202ENST00000481739 KRTAP5-4Q6L8H1 288 aa4.58□□□□□ -1.68
RXRA-202ENST00000481739 SYNE1Q8NF91 8797 aaKnown RBP4.56□□□□□ -1.68
RXRA-202ENST00000481739 GPR98Q8WXG9 6306 aa4.55□□□□□ -1.68
RXRA-202ENST00000481739 LCE4AQ5TA78 99 aa4.54□□□□□ -1.68
RXRA-202ENST00000481739 MT4P47944 62 aa4.5□□□□□ -1.69
RXRA-202ENST00000481739 KRTAP12-4P60329 112 aa4.49□□□□□ -1.69
RXRA-202ENST00000481739 KRTAP9-4Q9BYQ2 154 aa4.47□□□□□ -1.69
RXRA-202ENST00000481739 KRTAP4-9Q9BYQ8 210 aa4.47□□□□□ -1.69
RXRA-202ENST00000481739 KRTAP4-6Q9BYQ5 205 aa4.42□□□□□ -1.7
RXRA-202ENST00000481739 LCE1DQ5T752 114 aa4.4□□□□□ -1.7
RXRA-202ENST00000481739 HMCN1Q96RW7 5635 aa4.4□□□□□ -1.71
RXRA-202ENST00000481739 KRTAP20-2Q3LI61 65 aa4.32□□□□□ -1.72
RXRA-202ENST00000481739 LCE3DQ9BYE3 92 aa4.32□□□□□ -1.72
RXRA-202ENST00000481739 MT3P25713 68 aa4.3□□□□□ -1.72
RXRA-202ENST00000481739 KRTAP6-2Q3LI66 62 aa4.3□□□□□ -1.72
RXRA-202ENST00000481739 LCE3EQ5T5B0 92 aa4.23□□□□□ -1.73
RXRA-202ENST00000481739 KRTAP5-3Q6L8H2 238 aa4.14□□□□□ -1.75
RXRA-202ENST00000481739 KRTAP5-2Q701N4 177 aa4.12□□□□□ -1.75
RXRA-202ENST00000481739 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
RXRA-202ENST00000481739 AHNAK2Q8IVF2 5795 aa3.97□□□□□ -1.77
RXRA-202ENST00000481739 PRM1P04553 51 aa3.79□□□□□ -1.8
RXRA-202ENST00000481739 KRTAP5-10Q6L8G5 202 aa3.77□□□□□ -1.81
RXRA-202ENST00000481739 KRTAP5-7Q6L8G8 165 aa3.77□□□□□ -1.81
RXRA-202ENST00000481739 KRTAP4-11Q9BYQ6 195 aa3.77□□□□□ -1.81
RXRA-202ENST00000481739 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
RXRA-202ENST00000481739 KRTAP5-8O75690 187 aa3.61□□□□□ -1.83
RXRA-202ENST00000481739 KRTAP5-1Q6L8H4 278 aa3.59□□□□□ -1.83
RXRA-202ENST00000481739 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
RXRA-202ENST00000481739 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
RXRA-202ENST00000481739 AHNAKQ09666 5890 aaKnown RBP3.47□□□□□ -1.85
RXRA-202ENST00000481739 KRTAP4-2Q9BYR5 136 aa3.43□□□□□ -1.86
RXRA-202ENST00000481739 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
RXRA-202ENST00000481739 MUC5BQ9HC84 5762 aaPredicted RBP3.39□□□□□ -1.87
RXRA-202ENST00000481739 KRTAP9-9Q9BYP9 154 aa3.32□□□□□ -1.88
RXRA-202ENST00000481739 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
RXRA-202ENST00000481739 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
RXRA-202ENST00000481739 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
RXRA-202ENST00000481739 KRTAP4-12Q9BQ66 201 aa2.94□□□□□ -1.94
RXRA-202ENST00000481739 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
RXRA-202ENST00000481739 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
RXRA-202ENST00000481739 PHGR1C9JFL3 82 aa2.61□□□□□ -1.99
RXRA-202ENST00000481739 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
RXRA-202ENST00000481739 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
RXRA-202ENST00000481739 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 12 ms