RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 KRTAP5-4Q6L8H1 288 aa6.37□□□□□ -1.39
CLK1-211ENST00000481641 KRTAP4-6Q9BYQ5 205 aa6.33□□□□□ -1.4
CLK1-211ENST00000481641 KRTAP4-7Q9BYR0 210 aa6.33□□□□□ -1.4
CLK1-211ENST00000481641 CCDC179H3BU77 68 aa6.31□□□□□ -1.4
CLK1-211ENST00000481641 AHNAK2Q8IVF2 5795 aa6.31□□□□□ -1.4
CLK1-211ENST00000481641 PRR15LQ9BU68 103 aa6.3□□□□□ -1.4
CLK1-211ENST00000481641 KRTAP12-3P60328 96 aa6.26□□□□□ -1.41
CLK1-211ENST00000481641 LINC01558Q9Y6Z2 57 aa6.24□□□□□ -1.41
CLK1-211ENST00000481641 KRTAP5-10Q6L8G5 202 aa6.2□□□□□ -1.42
CLK1-211ENST00000481641 ATP5EP56381 51 aaPredicted RBP6.19□□□□□ -1.42
CLK1-211ENST00000481641 UQCR11O14957 56 aa6.1□□□□□ -1.43
CLK1-211ENST00000481641 KRTAP5-5Q701N2 237 aaPredicted RBP6.06□□□□□ -1.44
CLK1-211ENST00000481641 KRTAP20-2Q3LI61 65 aa6.04□□□□□ -1.44
CLK1-211ENST00000481641 KRTAP5-3Q6L8H2 238 aa6.02□□□□□ -1.45
CLK1-211ENST00000481641 LOC100996750A0A140TA64 210 aa6□□□□□ -1.45
CLK1-211ENST00000481641 KRTAP25-1Q3LHN0 102 aa6□□□□□ -1.45
CLK1-211ENST00000481641 TMEM258P61165 79 aa5.98□□□□□ -1.45
CLK1-211ENST00000481641 MIR22HGQ0VDD5 57 aa5.97□□□□□ -1.45
CLK1-211ENST00000481641 KRTAP5-7Q6L8G8 165 aa5.96□□□□□ -1.46
CLK1-211ENST00000481641 SPRR5A0A1B0GTR4 108 aa5.95□□□□□ -1.46
CLK1-211ENST00000481641 KRTAP12-4P60329 112 aa5.92□□□□□ -1.46
CLK1-211ENST00000481641 H3BS24 57 aa5.85□□□□□ -1.47
CLK1-211ENST00000481641 K7ERS5 55 aa5.84□□□□□ -1.47
CLK1-211ENST00000481641 SYNE1Q8NF91 8797 aaKnown RBP5.84□□□□□ -1.47
CLK1-211ENST00000481641 PSPHP1O15172 72 aa5.79□□□□□ -1.48
CLK1-211ENST00000481641 KRTAP15-1Q3LI76 137 aa5.79□□□□□ -1.48
CLK1-211ENST00000481641 KRTAP19-4Q3LI73 84 aa5.78□□□□□ -1.48
CLK1-211ENST00000481641 LCE3CQ5T5A8 94 aa5.75□□□□□ -1.49
CLK1-211ENST00000481641 KRTAP23-1A1A580 65 aa5.73□□□□□ -1.49
CLK1-211ENST00000481641 V9GYY9 64 aa5.67□□□□□ -1.5
CLK1-211ENST00000481641 Q1T7F1 81 aa5.66□□□□□ -1.5
CLK1-211ENST00000481641 KRTAP6-1Q3LI64 71 aa5.61□□□□□ -1.51
CLK1-211ENST00000481641 MT1AP04731 61 aa5.59□□□□□ -1.51
CLK1-211ENST00000481641 KRTAP5-2Q701N4 177 aa5.56□□□□□ -1.52
CLK1-211ENST00000481641 A6NED7 52 aa5.55□□□□□ -1.52
CLK1-211ENST00000481641 KRTAP4-11Q9BYQ6 195 aa5.55□□□□□ -1.52
CLK1-211ENST00000481641 CDC42SE1Q9NRR8 79 aa5.53□□□□□ -1.52
CLK1-211ENST00000481641 KRTAP9-6A8MVA2 160 aa5.48□□□□□ -1.53
CLK1-211ENST00000481641 ROMO1P60602 79 aa5.45□□□□□ -1.54
CLK1-211ENST00000481641 KRTAP9-4Q9BYQ2 154 aa5.44□□□□□ -1.54
CLK1-211ENST00000481641 RPS28P62857 69 aaKnown RBP5.43□□□□□ -1.54
CLK1-211ENST00000481641 KRTAP5-8O75690 187 aa5.38□□□□□ -1.55
CLK1-211ENST00000481641 KRTAP6-2Q3LI66 62 aa5.38□□□□□ -1.55
CLK1-211ENST00000481641 KRTAP4-12Q9BQ66 201 aa5.24□□□□□ -1.57
CLK1-211ENST00000481641 OBSCNQ5VST9 7968 aa5.2□□□□□ -1.58
CLK1-211ENST00000481641 AHNAKQ09666 5890 aaKnown RBP5.19□□□□□ -1.58
CLK1-211ENST00000481641 MUC5BQ9HC84 5762 aaPredicted RBP5.19□□□□□ -1.58
CLK1-211ENST00000481641 MUC5ACP98088 5654 aa5.18□□□□□ -1.58
CLK1-211ENST00000481641 MT3P25713 68 aa5.11□□□□□ -1.59
CLK1-211ENST00000481641 KRTAP9-9Q9BYP9 154 aa5.11□□□□□ -1.59
CLK1-211ENST00000481641 KRTAP5-1Q6L8H4 278 aa5.03□□□□□ -1.6
CLK1-211ENST00000481641 PCP4P48539 62 aa4.9□□□□□ -1.63
CLK1-211ENST00000481641 SVIPQ8NHG7 77 aa4.87□□□□□ -1.63
CLK1-211ENST00000481641 LCE1EQ5T753 118 aa4.7□□□□□ -1.66
CLK1-211ENST00000481641 KRTAP4-2Q9BYR5 136 aa4.67□□□□□ -1.66
CLK1-211ENST00000481641 BRK1Q8WUW1 75 aa4.53□□□□□ -1.68
CLK1-211ENST00000481641 LCE1BQ5T7P3 118 aa4.52□□□□□ -1.69
CLK1-211ENST00000481641 LCE1CQ5T751 118 aa4.38□□□□□ -1.71
CLK1-211ENST00000481641 A0A0A0MQY5 61 aa4.25□□□□□ -1.73
CLK1-211ENST00000481641 PMAIP1Q13794 54 aa4.22□□□□□ -1.73
CLK1-211ENST00000481641 PRAC1Q96KF2 57 aa4.21□□□□□ -1.74
CLK1-211ENST00000481641 LCE3DQ9BYE3 92 aa4.1□□□□□ -1.75
CLK1-211ENST00000481641 KRTAP5-11Q6L8G4 156 aa3.98□□□□□ -1.77
CLK1-211ENST00000481641 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.95□□□□□ -1.78
CLK1-211ENST00000481641 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
CLK1-211ENST00000481641 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
CLK1-211ENST00000481641 KRTAP21-2Q3LI59 83 aa3.68□□□□□ -1.82
CLK1-211ENST00000481641 PRO0628Q9UI54 55 aa3.65□□□□□ -1.83
CLK1-211ENST00000481641 PHGR1C9JFL3 82 aa3.62□□□□□ -1.83
CLK1-211ENST00000481641 KTN1-AS1Q86SY8 53 aa3.57□□□□□ -1.84
CLK1-211ENST00000481641 LUZP6Q538Z0 58 aa3.49□□□□□ -1.85
CLK1-211ENST00000481641 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
CLK1-211ENST00000481641 NDUFAF8A1L188 74 aa3.37□□□□□ -1.87
CLK1-211ENST00000481641 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
CLK1-211ENST00000481641 PRM1P04553 51 aa2.8□□□□□ -1.96
CLK1-211ENST00000481641 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
CLK1-211ENST00000481641 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
CLK1-211ENST00000481641 INE1O15225 51 aa1.93□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 297.3 ms