RNA–Protein interactions for RNA: ENST00000481168.1

RPN1-204, Transcript of ribophorin I, humanhuman

TSL 2

Gene RPN1, Length 751 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-204ENST00000481168 KRTAP20-2Q3LI61 65 aa4.56□□□□□ -1.68
RPN1-204ENST00000481168 A0A1B0GU69 56 aa4.55□□□□□ -1.68
RPN1-204ENST00000481168 MT1MQ8N339 61 aa4.55□□□□□ -1.68
RPN1-204ENST00000481168 MUC5ACP98088 5654 aa4.52□□□□□ -1.69
RPN1-204ENST00000481168 KRTAP4-3Q9BYR4 195 aa4.51□□□□□ -1.69
RPN1-204ENST00000481168 ATP5EP56381 51 aaPredicted RBP4.49□□□□□ -1.69
RPN1-204ENST00000481168 SMIM26A0A096LP01 95 aa4.48□□□□□ -1.69
RPN1-204ENST00000481168 KRTAP19-5Q3LI72 72 aa4.47□□□□□ -1.69
RPN1-204ENST00000481168 C10orf95Q9H7T3 257 aa4.47□□□□□ -1.69
RPN1-204ENST00000481168 LINC01558Q9Y6Z2 57 aa4.47□□□□□ -1.69
RPN1-204ENST00000481168 MUC5BQ9HC84 5762 aaPredicted RBP4.46□□□□□ -1.69
RPN1-204ENST00000481168 TMEM258P61165 79 aa4.42□□□□□ -1.7
RPN1-204ENST00000481168 MT1LQ93083 61 aa4.39□□□□□ -1.71
RPN1-204ENST00000481168 LCE3AQ5TA76 89 aa4.38□□□□□ -1.71
RPN1-204ENST00000481168 PRR15LQ9BU68 103 aa4.37□□□□□ -1.71
RPN1-204ENST00000481168 KRTAP12-4P60329 112 aa4.35□□□□□ -1.71
RPN1-204ENST00000481168 KRTAP4-11Q9BYQ6 195 aa4.35□□□□□ -1.71
RPN1-204ENST00000481168 KRTAP4-7Q9BYR0 210 aa4.35□□□□□ -1.71
RPN1-204ENST00000481168 TNP1P09430 55 aa4.31□□□□□ -1.72
RPN1-204ENST00000481168 UQCR11O14957 56 aa4.28□□□□□ -1.72
RPN1-204ENST00000481168 KRTAP5-8O75690 187 aa4.28□□□□□ -1.72
RPN1-204ENST00000481168 SYNE1Q8NF91 8797 aaKnown RBP4.24□□□□□ -1.73
RPN1-204ENST00000481168 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.74
RPN1-204ENST00000481168 MIR22HGQ0VDD5 57 aa4.2□□□□□ -1.74
RPN1-204ENST00000481168 KRTAP12-3P60328 96 aa4.18□□□□□ -1.74
RPN1-204ENST00000481168 Q1T7F1 81 aa4.18□□□□□ -1.74
RPN1-204ENST00000481168 PSPHP1O15172 72 aa4.16□□□□□ -1.74
RPN1-204ENST00000481168 KRTAP9-9Q9BYP9 154 aa4.16□□□□□ -1.74
RPN1-204ENST00000481168 KRTAP25-1Q3LHN0 102 aa4.11□□□□□ -1.75
RPN1-204ENST00000481168 V9GYY9 64 aa4.11□□□□□ -1.75
RPN1-204ENST00000481168 LOC100996750A0A140TA64 210 aa4.03□□□□□ -1.76
RPN1-204ENST00000481168 KRTAP5-2Q701N4 177 aa4.02□□□□□ -1.77
RPN1-204ENST00000481168 OBSCNQ5VST9 7968 aa4.01□□□□□ -1.77
RPN1-204ENST00000481168 K7ERS5 55 aa4□□□□□ -1.77
RPN1-204ENST00000481168 KRTAP23-1A1A580 65 aa3.98□□□□□ -1.77
RPN1-204ENST00000481168 RPS28P62857 69 aaKnown RBP3.98□□□□□ -1.77
RPN1-204ENST00000481168 A6NED7 52 aa3.97□□□□□ -1.77
RPN1-204ENST00000481168 PCP4P48539 62 aa3.93□□□□□ -1.78
RPN1-204ENST00000481168 SVIPQ8NHG7 77 aa3.92□□□□□ -1.78
RPN1-204ENST00000481168 KRTAP15-1Q3LI76 137 aa3.91□□□□□ -1.78
RPN1-204ENST00000481168 KRTAP19-4Q3LI73 84 aa3.88□□□□□ -1.79
RPN1-204ENST00000481168 H3BS24 57 aa3.87□□□□□ -1.79
RPN1-204ENST00000481168 LCE3CQ5T5A8 94 aa3.87□□□□□ -1.79
RPN1-204ENST00000481168 CDC42SE1Q9NRR8 79 aa3.86□□□□□ -1.79
RPN1-204ENST00000481168 ROMO1P60602 79 aa3.85□□□□□ -1.79
RPN1-204ENST00000481168 KRTAP9-6A8MVA2 160 aa3.76□□□□□ -1.81
RPN1-204ENST00000481168 KRTAP6-1Q3LI64 71 aa3.76□□□□□ -1.81
RPN1-204ENST00000481168 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
RPN1-204ENST00000481168 KRTAP9-4Q9BYQ2 154 aa3.76□□□□□ -1.81
RPN1-204ENST00000481168 KRTAP6-2Q3LI66 62 aa3.75□□□□□ -1.81
RPN1-204ENST00000481168 MT1AP04731 61 aa3.71□□□□□ -1.82
RPN1-204ENST00000481168 MT3P25713 68 aa3.45□□□□□ -1.86
RPN1-204ENST00000481168 BRK1Q8WUW1 75 aa3.43□□□□□ -1.86
RPN1-204ENST00000481168 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
RPN1-204ENST00000481168 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
RPN1-204ENST00000481168 KRTAP4-12Q9BQ66 201 aa3.26□□□□□ -1.89
RPN1-204ENST00000481168 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
RPN1-204ENST00000481168 PMAIP1Q13794 54 aa3.2□□□□□ -1.9
RPN1-204ENST00000481168 PRAC1Q96KF2 57 aa3.19□□□□□ -1.9
RPN1-204ENST00000481168 A0A0A0MQY5 61 aa3.16□□□□□ -1.9
RPN1-204ENST00000481168 PHGR1C9JFL3 82 aa3.11□□□□□ -1.91
RPN1-204ENST00000481168 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
RPN1-204ENST00000481168 KRTAP5-11Q6L8G4 156 aa3.03□□□□□ -1.92
RPN1-204ENST00000481168 PRO0628Q9UI54 55 aa3□□□□□ -1.93
RPN1-204ENST00000481168 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
RPN1-204ENST00000481168 KTN1-AS1Q86SY8 53 aa2.87□□□□□ -1.95
RPN1-204ENST00000481168 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
RPN1-204ENST00000481168 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
RPN1-204ENST00000481168 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
RPN1-204ENST00000481168 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
RPN1-204ENST00000481168 LUZP6Q538Z0 58 aa2.51□□□□□ -2.01
RPN1-204ENST00000481168 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
RPN1-204ENST00000481168 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
RPN1-204ENST00000481168 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
RPN1-204ENST00000481168 NDUFAF8A1L188 74 aa2.33□□□□□ -2.04
RPN1-204ENST00000481168 PRM1P04553 51 aa1.99□□□□□ -2.09
RPN1-204ENST00000481168 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
RPN1-204ENST00000481168 INE1O15225 51 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms