RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 MT1LQ93083 61 aa4.59□□□□□ -1.67
ABCF3-215ENST00000481116 PCP4P48539 62 aa4.56□□□□□ -1.68
ABCF3-215ENST00000481116 MT1MQ8N339 61 aa4.56□□□□□ -1.68
ABCF3-215ENST00000481116 PP632Q6XCG6 107 aa4.55□□□□□ -1.68
ABCF3-215ENST00000481116 RPS28P62857 69 aaKnown RBP4.53□□□□□ -1.68
ABCF3-215ENST00000481116 KRTAP4-9Q9BYQ8 210 aa4.53□□□□□ -1.68
ABCF3-215ENST00000481116 K7ERS5 55 aa4.51□□□□□ -1.69
ABCF3-215ENST00000481116 KRTAP4-3Q9BYR4 195 aa4.51□□□□□ -1.69
ABCF3-215ENST00000481116 A6NED7 52 aa4.45□□□□□ -1.7
ABCF3-215ENST00000481116 KRTAP12-3P60328 96 aa4.44□□□□□ -1.7
ABCF3-215ENST00000481116 KRTAP25-1Q3LHN0 102 aa4.44□□□□□ -1.7
ABCF3-215ENST00000481116 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
ABCF3-215ENST00000481116 LCE1DQ5T752 114 aa4.41□□□□□ -1.7
ABCF3-215ENST00000481116 MT4P47944 62 aa4.38□□□□□ -1.71
ABCF3-215ENST00000481116 LCE4AQ5TA78 99 aa4.37□□□□□ -1.71
ABCF3-215ENST00000481116 KRTAP5-4Q6L8H1 288 aa4.31□□□□□ -1.72
ABCF3-215ENST00000481116 KRTAP23-1A1A580 65 aa4.3□□□□□ -1.72
ABCF3-215ENST00000481116 CDC42SE1Q9NRR8 79 aa4.29□□□□□ -1.72
ABCF3-215ENST00000481116 HMCN1Q96RW7 5635 aa4.28□□□□□ -1.72
ABCF3-215ENST00000481116 KRTAP4-6Q9BYQ5 205 aa4.26□□□□□ -1.73
ABCF3-215ENST00000481116 GPR98Q8WXG9 6306 aa4.23□□□□□ -1.73
ABCF3-215ENST00000481116 ROMO1P60602 79 aa4.23□□□□□ -1.73
ABCF3-215ENST00000481116 LOC100996750A0A140TA64 210 aa4.19□□□□□ -1.74
ABCF3-215ENST00000481116 KRTAP19-4Q3LI73 84 aa4.19□□□□□ -1.74
ABCF3-215ENST00000481116 KRTAP5-5Q701N2 237 aaPredicted RBP4.17□□□□□ -1.74
ABCF3-215ENST00000481116 KRTAP15-1Q3LI76 137 aa4.16□□□□□ -1.74
ABCF3-215ENST00000481116 AHNAK2Q8IVF2 5795 aa4.15□□□□□ -1.75
ABCF3-215ENST00000481116 LCE3CQ5T5A8 94 aa4.1□□□□□ -1.75
ABCF3-215ENST00000481116 KRTAP20-2Q3LI61 65 aa4.08□□□□□ -1.76
ABCF3-215ENST00000481116 KRTAP5-10Q6L8G5 202 aa4.06□□□□□ -1.76
ABCF3-215ENST00000481116 SPRR5A0A1B0GTR4 108 aa4.03□□□□□ -1.76
ABCF3-215ENST00000481116 KRTAP12-4P60329 112 aa4.03□□□□□ -1.76
ABCF3-215ENST00000481116 SYNE1Q8NF91 8797 aaKnown RBP3.99□□□□□ -1.77
ABCF3-215ENST00000481116 KRTAP5-3Q6L8H2 238 aa3.98□□□□□ -1.77
ABCF3-215ENST00000481116 BRK1Q8WUW1 75 aa3.96□□□□□ -1.78
ABCF3-215ENST00000481116 KRTAP9-6A8MVA2 160 aa3.91□□□□□ -1.78
ABCF3-215ENST00000481116 KRTAP6-1Q3LI64 71 aa3.9□□□□□ -1.79
ABCF3-215ENST00000481116 MT1AP04731 61 aa3.89□□□□□ -1.79
ABCF3-215ENST00000481116 KRTAP5-7Q6L8G8 165 aa3.88□□□□□ -1.79
ABCF3-215ENST00000481116 SVIPQ8NHG7 77 aa3.83□□□□□ -1.8
ABCF3-215ENST00000481116 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.8
ABCF3-215ENST00000481116 KRTAP9-4Q9BYQ2 154 aa3.77□□□□□ -1.81
ABCF3-215ENST00000481116 PMAIP1Q13794 54 aa3.73□□□□□ -1.81
ABCF3-215ENST00000481116 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
ABCF3-215ENST00000481116 KRTAP4-11Q9BYQ6 195 aa3.71□□□□□ -1.82
ABCF3-215ENST00000481116 PRO0628Q9UI54 55 aa3.61□□□□□ -1.83
ABCF3-215ENST00000481116 KRTAP5-8O75690 187 aa3.59□□□□□ -1.83
ABCF3-215ENST00000481116 PRAC1Q96KF2 57 aa3.55□□□□□ -1.84
ABCF3-215ENST00000481116 MT3P25713 68 aa3.54□□□□□ -1.84
ABCF3-215ENST00000481116 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
ABCF3-215ENST00000481116 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.87
ABCF3-215ENST00000481116 KTN1-AS1Q86SY8 53 aa3.4□□□□□ -1.87
ABCF3-215ENST00000481116 KRTAP9-9Q9BYP9 154 aa3.38□□□□□ -1.87
ABCF3-215ENST00000481116 MUC5BQ9HC84 5762 aaPredicted RBP3.37□□□□□ -1.87
ABCF3-215ENST00000481116 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
ABCF3-215ENST00000481116 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.87
ABCF3-215ENST00000481116 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
ABCF3-215ENST00000481116 KRTAP4-12Q9BQ66 201 aa3.15□□□□□ -1.91
ABCF3-215ENST00000481116 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
ABCF3-215ENST00000481116 KRTAP4-2Q9BYR5 136 aa3.09□□□□□ -1.91
ABCF3-215ENST00000481116 LUZP6Q538Z0 58 aa3.01□□□□□ -1.93
ABCF3-215ENST00000481116 LCE1CQ5T751 118 aa3□□□□□ -1.93
ABCF3-215ENST00000481116 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
ABCF3-215ENST00000481116 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
ABCF3-215ENST00000481116 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
ABCF3-215ENST00000481116 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.98
ABCF3-215ENST00000481116 H3BS24 57 aa2.7□□□□□ -1.98
ABCF3-215ENST00000481116 NDUFAF8A1L188 74 aa2.62□□□□□ -1.99
ABCF3-215ENST00000481116 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
ABCF3-215ENST00000481116 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
ABCF3-215ENST00000481116 A0A0A0MQY5 61 aa2.48□□□□□ -2.01
ABCF3-215ENST00000481116 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
ABCF3-215ENST00000481116 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
ABCF3-215ENST00000481116 INE1O15225 51 aa2.24□□□□□ -2.05
ABCF3-215ENST00000481116 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
ABCF3-215ENST00000481116 PRM1P04553 51 aa2.15□□□□□ -2.07
ABCF3-215ENST00000481116 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
ABCF3-215ENST00000481116 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 13.4 ms