RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 SPRR2AP35326 72 aa1.9□□□□□ -2.11
HDAC6-223ENST00000480525 MT1EP04732 61 aa1.89□□□□□ -2.11
HDAC6-223ENST00000480525 KRTAP2-3P0C7H8 128 aa1.89□□□□□ -2.11
HDAC6-223ENST00000480525 KRTAP2-4Q9BYR9 128 aa1.89□□□□□ -2.11
HDAC6-223ENST00000480525 LCE5AQ5TCM9 118 aa1.88□□□□□ -2.11
HDAC6-223ENST00000480525 MT1GP13640 62 aa1.87□□□□□ -2.11
HDAC6-223ENST00000480525 KRTAP20-1Q3LI63 56 aa1.87□□□□□ -2.11
HDAC6-223ENST00000480525 KRTAP19-3Q7Z4W3 81 aa1.87□□□□□ -2.11
HDAC6-223ENST00000480525 PP632Q6XCG6 107 aa1.86□□□□□ -2.11
HDAC6-223ENST00000480525 LCE3AQ5TA76 89 aa1.85□□□□□ -2.11
HDAC6-223ENST00000480525 SPRR2DP22532 72 aa1.84□□□□□ -2.11
HDAC6-223ENST00000480525 KRTAP19-5Q3LI72 72 aa1.84□□□□□ -2.11
HDAC6-223ENST00000480525 ROMO1P60602 79 aa1.83□□□□□ -2.12
HDAC6-223ENST00000480525 KRTAP2-2Q9BYT5 123 aa1.83□□□□□ -2.12
HDAC6-223ENST00000480525 KRTAP2-1Q9BYU5 128 aa1.83□□□□□ -2.12
HDAC6-223ENST00000480525 KRTAP12-3P60328 96 aa1.82□□□□□ -2.12
HDAC6-223ENST00000480525 MT1LQ93083 61 aa1.82□□□□□ -2.12
HDAC6-223ENST00000480525 DSTQ03001 7570 aaKnown RBP1.81□□□□□ -2.12
HDAC6-223ENST00000480525 LCE3BQ5TA77 95 aa1.79□□□□□ -2.12
HDAC6-223ENST00000480525 MT1MQ8N339 61 aa1.79□□□□□ -2.12
HDAC6-223ENST00000480525 A0A0A0MQY5 61 aa1.78□□□□□ -2.12
HDAC6-223ENST00000480525 KRTAP15-1Q3LI76 137 aa1.75□□□□□ -2.13
HDAC6-223ENST00000480525 LCE4AQ5TA78 99 aa1.72□□□□□ -2.13
HDAC6-223ENST00000480525 KRTAP5-4Q6L8H1 288 aa1.72□□□□□ -2.13
HDAC6-223ENST00000480525 NDUFAF8A1L188 74 aa1.69□□□□□ -2.14
HDAC6-223ENST00000480525 LCE3CQ5T5A8 94 aa1.69□□□□□ -2.14
HDAC6-223ENST00000480525 KRTAP5-5Q701N2 237 aaPredicted RBP1.68□□□□□ -2.14
HDAC6-223ENST00000480525 SPRR5A0A1B0GTR4 108 aa1.64□□□□□ -2.15
HDAC6-223ENST00000480525 KRTAP4-3Q9BYR4 195 aa1.64□□□□□ -2.15
HDAC6-223ENST00000480525 LUZP6Q538Z0 58 aa1.63□□□□□ -2.15
HDAC6-223ENST00000480525 KRTAP4-7Q9BYR0 210 aa1.63□□□□□ -2.15
HDAC6-223ENST00000480525 HMCN1Q96RW7 5635 aa1.63□□□□□ -2.15
HDAC6-223ENST00000480525 LCE1DQ5T752 114 aa1.61□□□□□ -2.15
HDAC6-223ENST00000480525 KRTAP12-4P60329 112 aa1.59□□□□□ -2.15
HDAC6-223ENST00000480525 MT1AP04731 61 aa1.58□□□□□ -2.16
HDAC6-223ENST00000480525 KRTAP20-2Q3LI61 65 aa1.56□□□□□ -2.16
HDAC6-223ENST00000480525 KRTAP4-9Q9BYQ8 210 aa1.56□□□□□ -2.16
HDAC6-223ENST00000480525 GPR98Q8WXG9 6306 aa1.55□□□□□ -2.16
HDAC6-223ENST00000480525 LOC100996750A0A140TA64 210 aa1.55□□□□□ -2.16
HDAC6-223ENST00000480525 KRTAP9-6A8MVA2 160 aa1.55□□□□□ -2.16
HDAC6-223ENST00000480525 MT4P47944 62 aa1.55□□□□□ -2.16
HDAC6-223ENST00000480525 KRTAP4-6Q9BYQ5 205 aa1.55□□□□□ -2.16
HDAC6-223ENST00000480525 SYNE1Q8NF91 8797 aaKnown RBP1.54□□□□□ -2.16
HDAC6-223ENST00000480525 KRTAP5-3Q6L8H2 238 aa1.53□□□□□ -2.16
HDAC6-223ENST00000480525 AHNAK2Q8IVF2 5795 aa1.53□□□□□ -2.17
HDAC6-223ENST00000480525 KRTAP5-2Q701N4 177 aa1.52□□□□□ -2.17
HDAC6-223ENST00000480525 KRTAP6-1Q3LI64 71 aa1.5□□□□□ -2.17
HDAC6-223ENST00000480525 KRTAP5-10Q6L8G5 202 aa1.5□□□□□ -2.17
HDAC6-223ENST00000480525 KRTAP9-4Q9BYQ2 154 aa1.5□□□□□ -2.17
HDAC6-223ENST00000480525 KRTAP5-7Q6L8G8 165 aa1.45□□□□□ -2.18
HDAC6-223ENST00000480525 MT3P25713 68 aa1.44□□□□□ -2.18
HDAC6-223ENST00000480525 KRTAP6-2Q3LI66 62 aa1.41□□□□□ -2.18
HDAC6-223ENST00000480525 KRTAP4-11Q9BYQ6 195 aa1.41□□□□□ -2.18
HDAC6-223ENST00000480525 INE1O15225 51 aa1.4□□□□□ -2.19
HDAC6-223ENST00000480525 OBSCNQ5VST9 7968 aa1.39□□□□□ -2.19
HDAC6-223ENST00000480525 KRTAP5-8O75690 187 aa1.36□□□□□ -2.19
HDAC6-223ENST00000480525 LCE1EQ5T753 118 aa1.36□□□□□ -2.19
HDAC6-223ENST00000480525 KRTAP5-1Q6L8H4 278 aa1.32□□□□□ -2.2
HDAC6-223ENST00000480525 MUC5ACP98088 5654 aa1.29□□□□□ -2.2
HDAC6-223ENST00000480525 KRTAP9-9Q9BYP9 154 aa1.26□□□□□ -2.21
HDAC6-223ENST00000480525 MUC5BQ9HC84 5762 aaPredicted RBP1.26□□□□□ -2.21
HDAC6-223ENST00000480525 LCE1CQ5T751 118 aa1.25□□□□□ -2.21
HDAC6-223ENST00000480525 LCE1BQ5T7P3 118 aa1.25□□□□□ -2.21
HDAC6-223ENST00000480525 AHNAKQ09666 5890 aaKnown RBP1.24□□□□□ -2.21
HDAC6-223ENST00000480525 LCE3DQ9BYE3 92 aa1.24□□□□□ -2.21
HDAC6-223ENST00000480525 KRTAP4-12Q9BQ66 201 aa1.23□□□□□ -2.21
HDAC6-223ENST00000480525 KRTAP4-2Q9BYR5 136 aa1.21□□□□□ -2.22
HDAC6-223ENST00000480525 LCE3EQ5T5B0 92 aa1.19□□□□□ -2.22
HDAC6-223ENST00000480525 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.19□□□□□ -2.22
HDAC6-223ENST00000480525 KRTAP5-11Q6L8G4 156 aa1.13□□□□□ -2.23
HDAC6-223ENST00000480525 LCE1FQ5T754 118 aa1.11□□□□□ -2.23
HDAC6-223ENST00000480525 KRTAP21-2Q3LI59 83 aa1.03□□□□□ -2.24
HDAC6-223ENST00000480525 PHGR1C9JFL3 82 aa0.96□□□□□ -2.26
HDAC6-223ENST00000480525 PRM1P04553 51 aa0.91□□□□□ -2.26
HDAC6-223ENST00000480525 MUC19Q7Z5P9 8384 aa0.84□□□□□ -2.27
HDAC6-223ENST00000480525 KRTAP4-4Q9BYR3 166 aa0.8□□□□□ -2.28
HDAC6-223ENST00000480525 KRTAP21-1Q3LI58 79 aa0.68□□□□□ -2.3
HDAC6-223ENST00000480525 MUC16Q8WXI7 14507 aa0.59□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 67.8 ms