RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 KRTAP19-4Q3LI73 84 aa5.52□□□□□ -1.53
TDP2-205ENST00000480495 KRTAP19-5Q3LI72 72 aa5.49□□□□□ -1.53
TDP2-205ENST00000480495 UQCR11O14957 56 aa5.46□□□□□ -1.54
TDP2-205ENST00000480495 MT1GP13640 62 aa5.44□□□□□ -1.54
TDP2-205ENST00000480495 TNP1P09430 55 aa5.42□□□□□ -1.54
TDP2-205ENST00000480495 PRO0628Q9UI54 55 aa5.42□□□□□ -1.54
TDP2-205ENST00000480495 DSTQ03001 7570 aaKnown RBP5.41□□□□□ -1.54
TDP2-205ENST00000480495 LCE4AQ5TA78 99 aa5.41□□□□□ -1.54
TDP2-205ENST00000480495 PP632Q6XCG6 107 aa5.41□□□□□ -1.54
TDP2-205ENST00000480495 C10orf95Q9H7T3 257 aa5.41□□□□□ -1.54
TDP2-205ENST00000480495 LCE1DQ5T752 114 aa5.36□□□□□ -1.55
TDP2-205ENST00000480495 LCE3AQ5TA76 89 aa5.36□□□□□ -1.55
TDP2-205ENST00000480495 MT1LQ93083 61 aa5.35□□□□□ -1.55
TDP2-205ENST00000480495 K7ERS5 55 aa5.34□□□□□ -1.55
TDP2-205ENST00000480495 PSPHP1O15172 72 aa5.33□□□□□ -1.56
TDP2-205ENST00000480495 MT1MQ8N339 61 aa5.33□□□□□ -1.56
TDP2-205ENST00000480495 BRK1Q8WUW1 75 aa5.32□□□□□ -1.56
TDP2-205ENST00000480495 A6NED7 52 aa5.3□□□□□ -1.56
TDP2-205ENST00000480495 MIR22HGQ0VDD5 57 aa5.3□□□□□ -1.56
TDP2-205ENST00000480495 KRTAP4-9Q9BYQ8 210 aa5.28□□□□□ -1.56
TDP2-205ENST00000480495 KRTAP4-7Q9BYR0 210 aa5.25□□□□□ -1.57
TDP2-205ENST00000480495 KRTAP4-3Q9BYR4 195 aa5.19□□□□□ -1.58
TDP2-205ENST00000480495 KRTAP12-3P60328 96 aa5.18□□□□□ -1.58
TDP2-205ENST00000480495 CDC42SE1Q9NRR8 79 aa5.15□□□□□ -1.59
TDP2-205ENST00000480495 KRTAP25-1Q3LHN0 102 aa5.12□□□□□ -1.59
TDP2-205ENST00000480495 MT4P47944 62 aa5.11□□□□□ -1.59
TDP2-205ENST00000480495 KRTAP5-4Q6L8H1 288 aa5.1□□□□□ -1.59
TDP2-205ENST00000480495 GPR98Q8WXG9 6306 aa5.08□□□□□ -1.6
TDP2-205ENST00000480495 PMAIP1Q13794 54 aa5.05□□□□□ -1.6
TDP2-205ENST00000480495 HMCN1Q96RW7 5635 aa5.04□□□□□ -1.6
TDP2-205ENST00000480495 KRTAP4-11Q9BYQ6 195 aa5.02□□□□□ -1.61
TDP2-205ENST00000480495 KRTAP4-2Q9BYR5 136 aa5.01□□□□□ -1.61
TDP2-205ENST00000480495 KTN1-AS1Q86SY8 53 aa4.97□□□□□ -1.61
TDP2-205ENST00000480495 KRTAP23-1A1A580 65 aa4.95□□□□□ -1.62
TDP2-205ENST00000480495 KRTAP5-5Q701N2 237 aaPredicted RBP4.89□□□□□ -1.63
TDP2-205ENST00000480495 AHNAK2Q8IVF2 5795 aa4.87□□□□□ -1.63
TDP2-205ENST00000480495 ROMO1P60602 79 aa4.87□□□□□ -1.63
TDP2-205ENST00000480495 KRTAP15-1Q3LI76 137 aa4.84□□□□□ -1.63
TDP2-205ENST00000480495 KRTAP5-10Q6L8G5 202 aa4.82□□□□□ -1.64
TDP2-205ENST00000480495 SPRR5A0A1B0GTR4 108 aa4.8□□□□□ -1.64
TDP2-205ENST00000480495 KRTAP20-2Q3LI61 65 aa4.8□□□□□ -1.64
TDP2-205ENST00000480495 KRTAP12-4P60329 112 aa4.79□□□□□ -1.64
TDP2-205ENST00000480495 LCE3CQ5T5A8 94 aa4.76□□□□□ -1.65
TDP2-205ENST00000480495 KRTAP5-3Q6L8H2 238 aa4.71□□□□□ -1.66
TDP2-205ENST00000480495 SYNE1Q8NF91 8797 aaKnown RBP4.67□□□□□ -1.66
TDP2-205ENST00000480495 KRTAP5-7Q6L8G8 165 aa4.65□□□□□ -1.67
TDP2-205ENST00000480495 PRAC1Q96KF2 57 aa4.63□□□□□ -1.67
TDP2-205ENST00000480495 MT1AP04731 61 aa4.56□□□□□ -1.68
TDP2-205ENST00000480495 KRTAP6-1Q3LI64 71 aa4.51□□□□□ -1.69
TDP2-205ENST00000480495 KRTAP9-6A8MVA2 160 aa4.47□□□□□ -1.69
TDP2-205ENST00000480495 KRTAP5-2Q701N4 177 aa4.46□□□□□ -1.7
TDP2-205ENST00000480495 KRTAP6-2Q3LI66 62 aa4.32□□□□□ -1.72
TDP2-205ENST00000480495 KRTAP5-8O75690 187 aa4.23□□□□□ -1.73
TDP2-205ENST00000480495 MT3P25713 68 aa4.19□□□□□ -1.74
TDP2-205ENST00000480495 OBSCNQ5VST9 7968 aa4.11□□□□□ -1.75
TDP2-205ENST00000480495 MUC5BQ9HC84 5762 aaPredicted RBP4□□□□□ -1.77
TDP2-205ENST00000480495 KRTAP5-1Q6L8H4 278 aa4□□□□□ -1.77
TDP2-205ENST00000480495 MUC5ACP98088 5654 aa3.97□□□□□ -1.77
TDP2-205ENST00000480495 AHNAKQ09666 5890 aaKnown RBP3.96□□□□□ -1.78
TDP2-205ENST00000480495 LUZP6Q538Z0 58 aa3.89□□□□□ -1.79
TDP2-205ENST00000480495 NDUFAF8A1L188 74 aa3.88□□□□□ -1.79
TDP2-205ENST00000480495 LCE1EQ5T753 118 aa3.85□□□□□ -1.79
TDP2-205ENST00000480495 A0A0A0MQY5 61 aa3.83□□□□□ -1.8
TDP2-205ENST00000480495 LCE1BQ5T7P3 118 aa3.59□□□□□ -1.83
TDP2-205ENST00000480495 LCE1CQ5T751 118 aa3.57□□□□□ -1.84
TDP2-205ENST00000480495 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
TDP2-205ENST00000480495 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
TDP2-205ENST00000480495 INE1O15225 51 aa3.32□□□□□ -1.88
TDP2-205ENST00000480495 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.27□□□□□ -1.89
TDP2-205ENST00000480495 LCE3EQ5T5B0 92 aa3.23□□□□□ -1.89
TDP2-205ENST00000480495 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
TDP2-205ENST00000480495 KRTAP21-2Q3LI59 83 aa2.98□□□□□ -1.93
TDP2-205ENST00000480495 PHGR1C9JFL3 82 aa2.8□□□□□ -1.96
TDP2-205ENST00000480495 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
TDP2-205ENST00000480495 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
TDP2-205ENST00000480495 PRM1P04553 51 aa2.43□□□□□ -2.02
TDP2-205ENST00000480495 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
TDP2-205ENST00000480495 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 41.1 ms