RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 MT1LQ93083 61 aa6.03□□□□□ -1.44
SCAMP3-207ENST00000480219 KRTAP19-3Q7Z4W3 81 aa6.02□□□□□ -1.45
SCAMP3-207ENST00000480219 KRTAP15-1Q3LI76 137 aa6.01□□□□□ -1.45
SCAMP3-207ENST00000480219 SPRR2EP22531 72 aa5.98□□□□□ -1.45
SCAMP3-207ENST00000480219 SPRR2BP35325 72 aa5.98□□□□□ -1.45
SCAMP3-207ENST00000480219 SPRR2AP35326 72 aa5.98□□□□□ -1.45
SCAMP3-207ENST00000480219 KRTAP19-4Q3LI73 84 aa5.98□□□□□ -1.45
SCAMP3-207ENST00000480219 LCE5AQ5TCM9 118 aa5.97□□□□□ -1.45
SCAMP3-207ENST00000480219 MT1GP13640 62 aa5.95□□□□□ -1.46
SCAMP3-207ENST00000480219 NEBP20929 6669 aa5.91□□□□□ -1.46
SCAMP3-207ENST00000480219 MT1MQ8N339 61 aa5.85□□□□□ -1.47
SCAMP3-207ENST00000480219 SPRR2DP22532 72 aa5.77□□□□□ -1.49
SCAMP3-207ENST00000480219 LCE3CQ5T5A8 94 aa5.77□□□□□ -1.49
SCAMP3-207ENST00000480219 SVIPQ8NHG7 77 aa5.77□□□□□ -1.49
SCAMP3-207ENST00000480219 KRTAP4-7Q9BYR0 210 aa5.72□□□□□ -1.49
SCAMP3-207ENST00000480219 KRTAP4-3Q9BYR4 195 aa5.65□□□□□ -1.5
SCAMP3-207ENST00000480219 KRTAP2-3P0C7H8 128 aa5.59□□□□□ -1.51
SCAMP3-207ENST00000480219 KRTAP2-4Q9BYR9 128 aa5.59□□□□□ -1.51
SCAMP3-207ENST00000480219 LCE3BQ5TA77 95 aa5.58□□□□□ -1.52
SCAMP3-207ENST00000480219 KRTAP20-1Q3LI63 56 aa5.56□□□□□ -1.52
SCAMP3-207ENST00000480219 SPRR5A0A1B0GTR4 108 aa5.55□□□□□ -1.52
SCAMP3-207ENST00000480219 DSTQ03001 7570 aaKnown RBP5.55□□□□□ -1.52
SCAMP3-207ENST00000480219 KRTAP9-6A8MVA2 160 aa5.46□□□□□ -1.54
SCAMP3-207ENST00000480219 KRTAP2-2Q9BYT5 123 aa5.46□□□□□ -1.54
SCAMP3-207ENST00000480219 KRTAP2-1Q9BYU5 128 aa5.46□□□□□ -1.54
SCAMP3-207ENST00000480219 LOC100996750A0A140TA64 210 aa5.38□□□□□ -1.55
SCAMP3-207ENST00000480219 KRTAP5-5Q701N2 237 aaPredicted RBP5.37□□□□□ -1.55
SCAMP3-207ENST00000480219 KRTAP5-4Q6L8H1 288 aa5.27□□□□□ -1.57
SCAMP3-207ENST00000480219 LCE4AQ5TA78 99 aa5.2□□□□□ -1.58
SCAMP3-207ENST00000480219 MT1AP04731 61 aa5.14□□□□□ -1.59
SCAMP3-207ENST00000480219 LUZP6Q538Z0 58 aa5.07□□□□□ -1.6
SCAMP3-207ENST00000480219 KRTAP6-1Q3LI64 71 aa5.06□□□□□ -1.6
SCAMP3-207ENST00000480219 SYNE1Q8NF91 8797 aaKnown RBP5.01□□□□□ -1.61
SCAMP3-207ENST00000480219 LCE1DQ5T752 114 aa5□□□□□ -1.61
SCAMP3-207ENST00000480219 KRTAP4-9Q9BYQ8 210 aa4.99□□□□□ -1.61
SCAMP3-207ENST00000480219 KRTAP12-4P60329 112 aa4.98□□□□□ -1.61
SCAMP3-207ENST00000480219 MT4P47944 62 aa4.97□□□□□ -1.61
SCAMP3-207ENST00000480219 HMCN1Q96RW7 5635 aa4.95□□□□□ -1.62
SCAMP3-207ENST00000480219 KRTAP4-6Q9BYQ5 205 aa4.95□□□□□ -1.62
SCAMP3-207ENST00000480219 KRTAP9-4Q9BYQ2 154 aa4.9□□□□□ -1.63
SCAMP3-207ENST00000480219 KRTAP20-2Q3LI61 65 aa4.89□□□□□ -1.63
SCAMP3-207ENST00000480219 KRTAP5-3Q6L8H2 238 aa4.76□□□□□ -1.65
SCAMP3-207ENST00000480219 KRTAP5-2Q701N4 177 aa4.74□□□□□ -1.65
SCAMP3-207ENST00000480219 NDUFAF8A1L188 74 aa4.72□□□□□ -1.65
SCAMP3-207ENST00000480219 KRTAP6-2Q3LI66 62 aa4.69□□□□□ -1.66
SCAMP3-207ENST00000480219 GPR98Q8WXG9 6306 aa4.68□□□□□ -1.66
SCAMP3-207ENST00000480219 MT3P25713 68 aa4.66□□□□□ -1.66
SCAMP3-207ENST00000480219 AHNAK2Q8IVF2 5795 aa4.51□□□□□ -1.69
SCAMP3-207ENST00000480219 KRTAP5-10Q6L8G5 202 aa4.38□□□□□ -1.71
SCAMP3-207ENST00000480219 KRTAP4-11Q9BYQ6 195 aa4.29□□□□□ -1.72
SCAMP3-207ENST00000480219 LCE3DQ9BYE3 92 aa4.27□□□□□ -1.73
SCAMP3-207ENST00000480219 OBSCNQ5VST9 7968 aa4.23□□□□□ -1.73
SCAMP3-207ENST00000480219 KRTAP5-7Q6L8G8 165 aa4.21□□□□□ -1.74
SCAMP3-207ENST00000480219 LCE1EQ5T753 118 aa4.18□□□□□ -1.74
SCAMP3-207ENST00000480219 KRTAP5-8O75690 187 aa4.16□□□□□ -1.74
SCAMP3-207ENST00000480219 LCE3EQ5T5B0 92 aa4.13□□□□□ -1.75
SCAMP3-207ENST00000480219 KRTAP5-1Q6L8H4 278 aa4.11□□□□□ -1.75
SCAMP3-207ENST00000480219 A0A0A0MQY5 61 aa4.08□□□□□ -1.76
SCAMP3-207ENST00000480219 MUC5ACP98088 5654 aa4.01□□□□□ -1.77
SCAMP3-207ENST00000480219 INE1O15225 51 aa3.96□□□□□ -1.78
SCAMP3-207ENST00000480219 KRTAP4-2Q9BYR5 136 aa3.88□□□□□ -1.79
SCAMP3-207ENST00000480219 LCE1CQ5T751 118 aa3.87□□□□□ -1.79
SCAMP3-207ENST00000480219 LCE1BQ5T7P3 118 aa3.87□□□□□ -1.79
SCAMP3-207ENST00000480219 KRTAP9-9Q9BYP9 154 aa3.77□□□□□ -1.81
SCAMP3-207ENST00000480219 MUC5BQ9HC84 5762 aaPredicted RBP3.7□□□□□ -1.82
SCAMP3-207ENST00000480219 AHNAKQ09666 5890 aaKnown RBP3.69□□□□□ -1.82
SCAMP3-207ENST00000480219 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.64□□□□□ -1.83
SCAMP3-207ENST00000480219 H3BS24 57 aa3.56□□□□□ -1.84
SCAMP3-207ENST00000480219 KRTAP4-12Q9BQ66 201 aa3.51□□□□□ -1.85
SCAMP3-207ENST00000480219 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
SCAMP3-207ENST00000480219 PRM1P04553 51 aa3.43□□□□□ -1.86
SCAMP3-207ENST00000480219 KRTAP21-2Q3LI59 83 aa3.36□□□□□ -1.87
SCAMP3-207ENST00000480219 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
SCAMP3-207ENST00000480219 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
SCAMP3-207ENST00000480219 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
SCAMP3-207ENST00000480219 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
SCAMP3-207ENST00000480219 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
SCAMP3-207ENST00000480219 MUC16Q8WXI7 14507 aa1.88□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 46 ms