RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 MT1HP80294 61 aa2.33□□□□□ -2.04
COMMD3-212ENST00000479958 UQCR11O14957 56 aa2.3□□□□□ -2.04
COMMD3-212ENST00000479958 MIR22HGQ0VDD5 57 aa2.3□□□□□ -2.04
COMMD3-212ENST00000479958 CDC42SE1Q9NRR8 79 aa2.3□□□□□ -2.04
COMMD3-212ENST00000479958 A0A0D9SG42 100 aa2.28□□□□□ -2.04
COMMD3-212ENST00000479958 M0R2T5 61 aa2.27□□□□□ -2.05
COMMD3-212ENST00000479958 PRO0628Q9UI54 55 aa2.27□□□□□ -2.05
COMMD3-212ENST00000479958 MT2AP02795 61 aa2.25□□□□□ -2.05
COMMD3-212ENST00000479958 MT1FP04733 61 aa2.25□□□□□ -2.05
COMMD3-212ENST00000479958 M0QZ58 72 aa2.25□□□□□ -2.05
COMMD3-212ENST00000479958 LINC01554Q52M75 96 aa2.24□□□□□ -2.05
COMMD3-212ENST00000479958 A6NN06 94 aa2.22□□□□□ -2.05
COMMD3-212ENST00000479958 KRTAP12-1P59990 96 aa2.22□□□□□ -2.05
COMMD3-212ENST00000479958 R4GN34 69 aa2.22□□□□□ -2.05
COMMD3-212ENST00000479958 PMAIP1Q13794 54 aa2.2□□□□□ -2.06
COMMD3-212ENST00000479958 LUZP6Q538Z0 58 aa2.2□□□□□ -2.06
COMMD3-212ENST00000479958 SPINT4Q6UDR6 99 aa2.2□□□□□ -2.06
COMMD3-212ENST00000479958 SPRR2GQ9BYE4 73 aa2.17□□□□□ -2.06
COMMD3-212ENST00000479958 CRIPTQ9P021 101 aa2.17□□□□□ -2.06
COMMD3-212ENST00000479958 K7ERS5 55 aa2.13□□□□□ -2.07
COMMD3-212ENST00000479958 MT1BP07438 61 aa2.13□□□□□ -2.07
COMMD3-212ENST00000479958 KRTAP19-8Q3LI54 63 aa2.13□□□□□ -2.07
COMMD3-212ENST00000479958 KRTAP6-3Q3LI67 103 aa2.12□□□□□ -2.07
COMMD3-212ENST00000479958 C10orf95Q9H7T3 257 aa2.12□□□□□ -2.07
COMMD3-212ENST00000479958 ROMO1P60602 79 aa2.1□□□□□ -2.07
COMMD3-212ENST00000479958 USH2AO75445 5202 aa2.1□□□□□ -2.07
COMMD3-212ENST00000479958 KTN1-AS1Q86SY8 53 aa2.09□□□□□ -2.07
COMMD3-212ENST00000479958 PLAC4Q8WY50 150 aa2.08□□□□□ -2.08
COMMD3-212ENST00000479958 CRCT1Q9UGL9 99 aa2.08□□□□□ -2.08
COMMD3-212ENST00000479958 MT1XP80297 61 aa2.07□□□□□ -2.08
COMMD3-212ENST00000479958 FSIP2Q5CZC0 6907 aa2.05□□□□□ -2.08
COMMD3-212ENST00000479958 KRTAP25-1Q3LHN0 102 aa2.02□□□□□ -2.09
COMMD3-212ENST00000479958 SSPOA2VEC9 5147 aa2.02□□□□□ -2.09
COMMD3-212ENST00000479958 TNP1P09430 55 aa1.98□□□□□ -2.09
COMMD3-212ENST00000479958 KRTAP19-6Q3LI70 58 aa1.94□□□□□ -2.1
COMMD3-212ENST00000479958 PRO2289Q9P1D8 64 aa1.93□□□□□ -2.1
COMMD3-212ENST00000479958 FCGBPQ9Y6R7 5405 aaPredicted RBP1.92□□□□□ -2.1
COMMD3-212ENST00000479958 KMT2DO14686 5537 aa1.91□□□□□ -2.1
COMMD3-212ENST00000479958 KRTAP19-5Q3LI72 72 aa1.88□□□□□ -2.11
COMMD3-212ENST00000479958 KRTAP8-1Q8IUC2 63 aa1.88□□□□□ -2.11
COMMD3-212ENST00000479958 KRTAP19-7Q3SYF9 63 aa1.83□□□□□ -2.12
COMMD3-212ENST00000479958 SYNE2Q8WXH0 6885 aaKnown RBP1.8□□□□□ -2.12
COMMD3-212ENST00000479958 MT1EP04732 61 aa1.8□□□□□ -2.12
COMMD3-212ENST00000479958 MT1LQ93083 61 aa1.77□□□□□ -2.13
COMMD3-212ENST00000479958 MUC12Q9UKN1 5478 aa1.76□□□□□ -2.13
COMMD3-212ENST00000479958 NEBP20929 6669 aa1.75□□□□□ -2.13
COMMD3-212ENST00000479958 SPRR2FQ96RM1 72 aa1.74□□□□□ -2.13
COMMD3-212ENST00000479958 MACF1Q9UPN3 7388 aaKnown RBP1.73□□□□□ -2.13
COMMD3-212ENST00000479958 KRTAP20-1Q3LI63 56 aa1.72□□□□□ -2.13
COMMD3-212ENST00000479958 KRTAP19-3Q7Z4W3 81 aa1.7□□□□□ -2.14
COMMD3-212ENST00000479958 GPR98Q8WXG9 6306 aa1.7□□□□□ -2.14
COMMD3-212ENST00000479958 MT1MQ8N339 61 aa1.69□□□□□ -2.14
COMMD3-212ENST00000479958 MDN1Q9NU22 5596 aa1.68□□□□□ -2.14
COMMD3-212ENST00000479958 MT1GP13640 62 aa1.67□□□□□ -2.14
COMMD3-212ENST00000479958 SPRR2EP22531 72 aa1.65□□□□□ -2.15
COMMD3-212ENST00000479958 SPRR2BP35325 72 aa1.65□□□□□ -2.15
COMMD3-212ENST00000479958 SPRR2AP35326 72 aa1.65□□□□□ -2.15
COMMD3-212ENST00000479958 SPRR2DP22532 72 aa1.58□□□□□ -2.16
COMMD3-212ENST00000479958 DSTQ03001 7570 aaKnown RBP1.57□□□□□ -2.16
COMMD3-212ENST00000479958 KRTAP2-3P0C7H8 128 aa1.54□□□□□ -2.16
COMMD3-212ENST00000479958 KRTAP2-4Q9BYR9 128 aa1.54□□□□□ -2.16
COMMD3-212ENST00000479958 KRTAP2-1Q9BYU5 128 aa1.53□□□□□ -2.16
COMMD3-212ENST00000479958 KRTAP6-1Q3LI64 71 aa1.51□□□□□ -2.17
COMMD3-212ENST00000479958 MT1AP04731 61 aa1.49□□□□□ -2.17
COMMD3-212ENST00000479958 AHNAK2Q8IVF2 5795 aa1.43□□□□□ -2.18
COMMD3-212ENST00000479958 SYNE1Q8NF91 8797 aaKnown RBP1.42□□□□□ -2.18
COMMD3-212ENST00000479958 MT4P47944 62 aa1.4□□□□□ -2.18
COMMD3-212ENST00000479958 KRTAP6-2Q3LI66 62 aa1.39□□□□□ -2.19
COMMD3-212ENST00000479958 KRTAP20-2Q3LI61 65 aa1.35□□□□□ -2.19
COMMD3-212ENST00000479958 KRTAP5-10Q6L8G5 202 aa1.35□□□□□ -2.19
COMMD3-212ENST00000479958 INE1O15225 51 aa1.31□□□□□ -2.2
COMMD3-212ENST00000479958 AHNAKQ09666 5890 aaKnown RBP1.3□□□□□ -2.2
COMMD3-212ENST00000479958 MUC5BQ9HC84 5762 aaPredicted RBP1.19□□□□□ -2.22
COMMD3-212ENST00000479958 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
COMMD3-212ENST00000479958 MUC5ACP98088 5654 aa1.18□□□□□ -2.22
COMMD3-212ENST00000479958 PRM1P04553 51 aa1.13□□□□□ -2.23
COMMD3-212ENST00000479958 PHGR1C9JFL3 82 aa0.83□□□□□ -2.28
COMMD3-212ENST00000479958 KRTAP21-1Q3LI58 79 aa0.68□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 7.8 ms