RNA–Protein interactions for RNA: ENST00000479576.5

CCDC13-205, Transcript of coiled-coil domain containing 13, humanhuman

TSL 3

Gene CCDC13, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-205ENST00000479576 MT1HP80294 61 aa3.38□□□□□ -1.87
CCDC13-205ENST00000479576 M0QZ58 72 aa3.37□□□□□ -1.87
CCDC13-205ENST00000479576 SYNE2Q8WXH0 6885 aaKnown RBP3.34□□□□□ -1.87
CCDC13-205ENST00000479576 M0R2T5 61 aa3.31□□□□□ -1.88
CCDC13-205ENST00000479576 SSPOA2VEC9 5147 aa3.31□□□□□ -1.88
CCDC13-205ENST00000479576 R4GN34 69 aa3.3□□□□□ -1.88
CCDC13-205ENST00000479576 FCGBPQ9Y6R7 5405 aaPredicted RBP3.26□□□□□ -1.89
CCDC13-205ENST00000479576 MACF1Q9UPN3 7388 aaKnown RBP3.26□□□□□ -1.89
CCDC13-205ENST00000479576 USH2AO75445 5202 aa3.25□□□□□ -1.89
CCDC13-205ENST00000479576 SPRR5A0A1B0GTR4 108 aa3.25□□□□□ -1.89
CCDC13-205ENST00000479576 NEBP20929 6669 aa3.24□□□□□ -1.89
CCDC13-205ENST00000479576 MT2AP02795 61 aa3.21□□□□□ -1.9
CCDC13-205ENST00000479576 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
CCDC13-205ENST00000479576 MT1FP04733 61 aa3.18□□□□□ -1.9
CCDC13-205ENST00000479576 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
CCDC13-205ENST00000479576 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
CCDC13-205ENST00000479576 KRTAP20-1Q3LI63 56 aa3.16□□□□□ -1.9
CCDC13-205ENST00000479576 KRTAP10-10P60014 251 aa3.15□□□□□ -1.91
CCDC13-205ENST00000479576 KRTAP6-3Q3LI67 103 aa3.13□□□□□ -1.91
CCDC13-205ENST00000479576 TNP1P09430 55 aa3.01□□□□□ -1.93
CCDC13-205ENST00000479576 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
CCDC13-205ENST00000479576 MUC12Q9UKN1 5478 aa3.01□□□□□ -1.93
CCDC13-205ENST00000479576 SPRR2GQ9BYE4 73 aa3□□□□□ -1.93
CCDC13-205ENST00000479576 KRTAP5-4Q6L8H1 288 aa2.99□□□□□ -1.93
CCDC13-205ENST00000479576 KRTAP19-8Q3LI54 63 aa2.97□□□□□ -1.93
CCDC13-205ENST00000479576 MT1BP07438 61 aa2.96□□□□□ -1.94
CCDC13-205ENST00000479576 KMT2DO14686 5537 aa2.95□□□□□ -1.94
CCDC13-205ENST00000479576 KRTAP19-6Q3LI70 58 aa2.93□□□□□ -1.94
CCDC13-205ENST00000479576 KRTAP2-3P0C7H8 128 aa2.92□□□□□ -1.94
CCDC13-205ENST00000479576 LCE3AQ5TA76 89 aa2.92□□□□□ -1.94
CCDC13-205ENST00000479576 KRTAP2-4Q9BYR9 128 aa2.92□□□□□ -1.94
CCDC13-205ENST00000479576 KRTAP5-9P26371 169 aa2.87□□□□□ -1.95
CCDC13-205ENST00000479576 MDN1Q9NU22 5596 aa2.83□□□□□ -1.96
CCDC13-205ENST00000479576 MT1XP80297 61 aa2.81□□□□□ -1.96
CCDC13-205ENST00000479576 KRTAP2-1Q9BYU5 128 aa2.79□□□□□ -1.96
CCDC13-205ENST00000479576 KRTAP4-3Q9BYR4 195 aa2.73□□□□□ -1.97
CCDC13-205ENST00000479576 OBSCNQ5VST9 7968 aa2.69□□□□□ -1.98
CCDC13-205ENST00000479576 KRTAP5-5Q701N2 237 aaPredicted RBP2.68□□□□□ -1.98
CCDC13-205ENST00000479576 KRTAP8-1Q8IUC2 63 aa2.68□□□□□ -1.98
CCDC13-205ENST00000479576 SPRR2EP22531 72 aa2.65□□□□□ -1.99
CCDC13-205ENST00000479576 SPRR2BP35325 72 aa2.65□□□□□ -1.99
CCDC13-205ENST00000479576 SPRR2AP35326 72 aa2.65□□□□□ -1.99
CCDC13-205ENST00000479576 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
CCDC13-205ENST00000479576 AHNAK2Q8IVF2 5795 aa2.61□□□□□ -1.99
CCDC13-205ENST00000479576 SPRR2FQ96RM1 72 aa2.58□□□□□ -2
CCDC13-205ENST00000479576 SPRR2DP22532 72 aa2.55□□□□□ -2
CCDC13-205ENST00000479576 KRTAP12-3P60328 96 aa2.55□□□□□ -2
CCDC13-205ENST00000479576 DSTQ03001 7570 aaKnown RBP2.54□□□□□ -2
CCDC13-205ENST00000479576 KRTAP5-10Q6L8G5 202 aa2.53□□□□□ -2
CCDC13-205ENST00000479576 KRTAP5-7Q6L8G8 165 aa2.52□□□□□ -2.01
CCDC13-205ENST00000479576 KRTAP19-7Q3SYF9 63 aa2.51□□□□□ -2.01
CCDC13-205ENST00000479576 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
CCDC13-205ENST00000479576 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
CCDC13-205ENST00000479576 KRTAP19-5Q3LI72 72 aa2.49□□□□□ -2.01
CCDC13-205ENST00000479576 MT1EP04732 61 aa2.48□□□□□ -2.01
CCDC13-205ENST00000479576 HMCN1Q96RW7 5635 aa2.48□□□□□ -2.01
CCDC13-205ENST00000479576 KRTAP5-2Q701N4 177 aa2.42□□□□□ -2.02
CCDC13-205ENST00000479576 KRTAP19-3Q7Z4W3 81 aa2.42□□□□□ -2.02
CCDC13-205ENST00000479576 MT1LQ93083 61 aa2.4□□□□□ -2.03
CCDC13-205ENST00000479576 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
CCDC13-205ENST00000479576 MT1GP13640 62 aa2.36□□□□□ -2.03
CCDC13-205ENST00000479576 MT1MQ8N339 61 aa2.35□□□□□ -2.03
CCDC13-205ENST00000479576 MUC5BQ9HC84 5762 aaPredicted RBP2.32□□□□□ -2.04
CCDC13-205ENST00000479576 MT4P47944 62 aa2.31□□□□□ -2.04
CCDC13-205ENST00000479576 KRTAP12-4P60329 112 aa2.26□□□□□ -2.05
CCDC13-205ENST00000479576 MUC5ACP98088 5654 aa2.23□□□□□ -2.05
CCDC13-205ENST00000479576 SYNE1Q8NF91 8797 aaKnown RBP2.06□□□□□ -2.08
CCDC13-205ENST00000479576 PRM1P04553 51 aa2.06□□□□□ -2.08
CCDC13-205ENST00000479576 MT1AP04731 61 aa2.06□□□□□ -2.08
CCDC13-205ENST00000479576 KRTAP6-1Q3LI64 71 aa2.03□□□□□ -2.08
CCDC13-205ENST00000479576 KRTAP20-2Q3LI61 65 aa2.02□□□□□ -2.09
CCDC13-205ENST00000479576 KRTAP5-8O75690 187 aa2□□□□□ -2.09
CCDC13-205ENST00000479576 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
CCDC13-205ENST00000479576 KRTAP6-2Q3LI66 62 aa1.9□□□□□ -2.11
CCDC13-205ENST00000479576 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
CCDC13-205ENST00000479576 PHGR1C9JFL3 82 aa1.48□□□□□ -2.17
CCDC13-205ENST00000479576 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
CCDC13-205ENST00000479576 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 38 ms