RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 J3QR89 54 aa5.2□□□□□ -1.58
DDX56-210ENST00000479440 KRTAP12-3P60328 96 aa5.17□□□□□ -1.58
DDX56-210ENST00000479440 SYNE1Q8NF91 8797 aaKnown RBP5.17□□□□□ -1.58
DDX56-210ENST00000479440 KRTAP4-11Q9BYQ6 195 aa5.16□□□□□ -1.58
DDX56-210ENST00000479440 COA5Q86WW8 74 aa5.15□□□□□ -1.59
DDX56-210ENST00000479440 SMIM26A0A096LP01 95 aa5.11□□□□□ -1.59
DDX56-210ENST00000479440 AHNAKQ09666 5890 aaKnown RBP5.09□□□□□ -1.59
DDX56-210ENST00000479440 MUC5ACP98088 5654 aa5.09□□□□□ -1.59
DDX56-210ENST00000479440 LOC100996750A0A140TA64 210 aa5.07□□□□□ -1.6
DDX56-210ENST00000479440 A0A1B0GV90 55 aa5.07□□□□□ -1.6
DDX56-210ENST00000479440 MUC5BQ9HC84 5762 aaPredicted RBP5.03□□□□□ -1.6
DDX56-210ENST00000479440 A8MU10 97 aa5.02□□□□□ -1.61
DDX56-210ENST00000479440 KRTAP5-8O75690 187 aa5□□□□□ -1.61
DDX56-210ENST00000479440 KRTAP5-2Q701N4 177 aa4.99□□□□□ -1.61
DDX56-210ENST00000479440 A0A1B0GU69 56 aa4.92□□□□□ -1.62
DDX56-210ENST00000479440 SERP2Q8N6R1 65 aa4.92□□□□□ -1.62
DDX56-210ENST00000479440 KRTAP19-4Q3LI73 84 aa4.87□□□□□ -1.63
DDX56-210ENST00000479440 KRTAP9-9Q9BYP9 154 aa4.86□□□□□ -1.63
DDX56-210ENST00000479440 MT1AP04731 61 aa4.82□□□□□ -1.64
DDX56-210ENST00000479440 OBSCNQ5VST9 7968 aa4.81□□□□□ -1.64
DDX56-210ENST00000479440 KRTAP6-1Q3LI64 71 aa4.8□□□□□ -1.64
DDX56-210ENST00000479440 K7ERU9 68 aa4.77□□□□□ -1.65
DDX56-210ENST00000479440 KRTAP25-1Q3LHN0 102 aa4.73□□□□□ -1.65
DDX56-210ENST00000479440 KRTAP9-4Q9BYQ2 154 aa4.7□□□□□ -1.66
DDX56-210ENST00000479440 KRTAP6-2Q3LI66 62 aa4.69□□□□□ -1.66
DDX56-210ENST00000479440 LCE3CQ5T5A8 94 aa4.69□□□□□ -1.66
DDX56-210ENST00000479440 KRTAP15-1Q3LI76 137 aa4.65□□□□□ -1.67
DDX56-210ENST00000479440 PRR15LQ9BU68 103 aa4.64□□□□□ -1.67
DDX56-210ENST00000479440 H7BZZ5 65 aa4.63□□□□□ -1.67
DDX56-210ENST00000479440 COX7CP15954 63 aa4.57□□□□□ -1.68
DDX56-210ENST00000479440 KRTAP5-1Q6L8H4 278 aa4.57□□□□□ -1.68
DDX56-210ENST00000479440 KRTAP23-1A1A580 65 aa4.49□□□□□ -1.69
DDX56-210ENST00000479440 MT3P25713 68 aa4.45□□□□□ -1.7
DDX56-210ENST00000479440 UQCR11O14957 56 aa4.44□□□□□ -1.7
DDX56-210ENST00000479440 PCP4P48539 62 aa4.43□□□□□ -1.7
DDX56-210ENST00000479440 LINC01558Q9Y6Z2 57 aa4.41□□□□□ -1.7
DDX56-210ENST00000479440 KRTAP9-6A8MVA2 160 aa4.4□□□□□ -1.71
DDX56-210ENST00000479440 ANAPC13Q9BS18 74 aa4.39□□□□□ -1.71
DDX56-210ENST00000479440 K7ERS5 55 aa4.37□□□□□ -1.71
DDX56-210ENST00000479440 CCDC179H3BU77 68 aa4.28□□□□□ -1.72
DDX56-210ENST00000479440 MIR22HGQ0VDD5 57 aa4.28□□□□□ -1.72
DDX56-210ENST00000479440 ATP5EP56381 51 aaPredicted RBP4.24□□□□□ -1.73
DDX56-210ENST00000479440 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
DDX56-210ENST00000479440 RPS28P62857 69 aaKnown RBP4.16□□□□□ -1.74
DDX56-210ENST00000479440 TMEM258P61165 79 aa4.13□□□□□ -1.75
DDX56-210ENST00000479440 CDC42SE1Q9NRR8 79 aa4.03□□□□□ -1.76
DDX56-210ENST00000479440 LCE1BQ5T7P3 118 aa4□□□□□ -1.77
DDX56-210ENST00000479440 KRTAP4-2Q9BYR5 136 aa4□□□□□ -1.77
DDX56-210ENST00000479440 Q1T7F1 81 aa3.94□□□□□ -1.78
DDX56-210ENST00000479440 ROMO1P60602 79 aa3.91□□□□□ -1.78
DDX56-210ENST00000479440 LCE1CQ5T751 118 aa3.9□□□□□ -1.79
DDX56-210ENST00000479440 PSPHP1O15172 72 aa3.87□□□□□ -1.79
DDX56-210ENST00000479440 V9GYY9 64 aa3.83□□□□□ -1.8
DDX56-210ENST00000479440 KRTAP4-12Q9BQ66 201 aa3.79□□□□□ -1.8
DDX56-210ENST00000479440 A6NED7 52 aa3.74□□□□□ -1.81
DDX56-210ENST00000479440 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.83
DDX56-210ENST00000479440 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
DDX56-210ENST00000479440 BRK1Q8WUW1 75 aa3.62□□□□□ -1.83
DDX56-210ENST00000479440 PRO0628Q9UI54 55 aa3.56□□□□□ -1.84
DDX56-210ENST00000479440 PHGR1C9JFL3 82 aa3.53□□□□□ -1.84
DDX56-210ENST00000479440 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
DDX56-210ENST00000479440 PMAIP1Q13794 54 aa3.43□□□□□ -1.86
DDX56-210ENST00000479440 SVIPQ8NHG7 77 aa3.31□□□□□ -1.88
DDX56-210ENST00000479440 KTN1-AS1Q86SY8 53 aa3.29□□□□□ -1.88
DDX56-210ENST00000479440 LCE3DQ9BYE3 92 aa3.29□□□□□ -1.88
DDX56-210ENST00000479440 PRAC1Q96KF2 57 aa3.2□□□□□ -1.9
DDX56-210ENST00000479440 KRTAP21-2Q3LI59 83 aa3.15□□□□□ -1.91
DDX56-210ENST00000479440 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
DDX56-210ENST00000479440 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.94
DDX56-210ENST00000479440 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
DDX56-210ENST00000479440 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
DDX56-210ENST00000479440 LUZP6Q538Z0 58 aa2.64□□□□□ -1.99
DDX56-210ENST00000479440 NDUFAF8A1L188 74 aa2.57□□□□□ -2
DDX56-210ENST00000479440 H3BS24 57 aa2.44□□□□□ -2.02
DDX56-210ENST00000479440 A0A0A0MQY5 61 aa2.29□□□□□ -2.04
DDX56-210ENST00000479440 INE1O15225 51 aa2.13□□□□□ -2.07
DDX56-210ENST00000479440 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.07
DDX56-210ENST00000479440 PRM1P04553 51 aa1.96□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 5.7 ms