RNA–Protein interactions for RNA: ENST00000479136.5

GSDMB-209, Transcript of gasdermin B, humanhuman

TSL 1 (best)

Gene GSDMB, Length 2,209 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-209ENST00000479136 KRTAP2-2Q9BYT5 123 aa3.9□□□□□ -1.78
GSDMB-209ENST00000479136 MACF1Q9UPN3 7388 aaKnown RBP3.89□□□□□ -1.79
GSDMB-209ENST00000479136 KRTAP19-7Q3SYF9 63 aa3.88□□□□□ -1.79
GSDMB-209ENST00000479136 MT1EP04732 61 aa3.83□□□□□ -1.8
GSDMB-209ENST00000479136 SPRR2FQ96RM1 72 aa3.82□□□□□ -1.8
GSDMB-209ENST00000479136 LCE3CQ5T5A8 94 aa3.8□□□□□ -1.8
GSDMB-209ENST00000479136 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.78□□□□□ -1.8
GSDMB-209ENST00000479136 SYNE2Q8WXH0 6885 aaKnown RBP3.76□□□□□ -1.81
GSDMB-209ENST00000479136 MT1LQ93083 61 aa3.75□□□□□ -1.81
GSDMB-209ENST00000479136 LCE4AQ5TA78 99 aa3.71□□□□□ -1.82
GSDMB-209ENST00000479136 KRTAP5-9P26371 169 aa3.7□□□□□ -1.82
GSDMB-209ENST00000479136 KRTAP9-7A8MTY7 169 aa3.7□□□□□ -1.82
GSDMB-209ENST00000479136 KRTAP19-3Q7Z4W3 81 aa3.7□□□□□ -1.82
GSDMB-209ENST00000479136 KRTAP6-3Q3LI67 103 aa3.67□□□□□ -1.82
GSDMB-209ENST00000479136 KRTAP9-6A8MVA2 160 aa3.67□□□□□ -1.82
GSDMB-209ENST00000479136 MT1GP13640 62 aa3.66□□□□□ -1.82
GSDMB-209ENST00000479136 MUC12Q9UKN1 5478 aa3.66□□□□□ -1.82
GSDMB-209ENST00000479136 KRTAP4-7Q9BYR0 210 aa3.66□□□□□ -1.82
GSDMB-209ENST00000479136 KRTAP9-4Q9BYQ2 154 aa3.65□□□□□ -1.83
GSDMB-209ENST00000479136 SPRR2EP22531 72 aa3.63□□□□□ -1.83
GSDMB-209ENST00000479136 SPRR2BP35325 72 aa3.63□□□□□ -1.83
GSDMB-209ENST00000479136 SPRR2AP35326 72 aa3.63□□□□□ -1.83
GSDMB-209ENST00000479136 KRTAP12-4P60329 112 aa3.63□□□□□ -1.83
GSDMB-209ENST00000479136 KRTAP9-9Q9BYP9 154 aa3.63□□□□□ -1.83
GSDMB-209ENST00000479136 LCE5AQ5TCM9 118 aa3.61□□□□□ -1.83
GSDMB-209ENST00000479136 MT1MQ8N339 61 aa3.61□□□□□ -1.83
GSDMB-209ENST00000479136 LCE1AQ5T7P2 110 aa3.6□□□□□ -1.83
GSDMB-209ENST00000479136 KRTAP4-3Q9BYR4 195 aa3.56□□□□□ -1.84
GSDMB-209ENST00000479136 MDN1Q9NU22 5596 aa3.53□□□□□ -1.85
GSDMB-209ENST00000479136 KRTAP4-12Q9BQ66 201 aa3.51□□□□□ -1.85
GSDMB-209ENST00000479136 SPRR2DP22532 72 aa3.51□□□□□ -1.85
GSDMB-209ENST00000479136 LOC100996750A0A140TA64 210 aa3.48□□□□□ -1.85
GSDMB-209ENST00000479136 KRTAP4-6Q9BYQ5 205 aa3.48□□□□□ -1.85
GSDMB-209ENST00000479136 DSTQ03001 7570 aaKnown RBP3.42□□□□□ -1.86
GSDMB-209ENST00000479136 NEBP20929 6669 aa3.4□□□□□ -1.87
GSDMB-209ENST00000479136 LCE1EQ5T753 118 aa3.36□□□□□ -1.87
GSDMB-209ENST00000479136 LCE3BQ5TA77 95 aa3.35□□□□□ -1.87
GSDMB-209ENST00000479136 PRM1P04553 51 aa3.28□□□□□ -1.88
GSDMB-209ENST00000479136 LCE1DQ5T752 114 aa3.26□□□□□ -1.89
GSDMB-209ENST00000479136 KRTAP5-5Q701N2 237 aaPredicted RBP3.21□□□□□ -1.89
GSDMB-209ENST00000479136 KRTAP20-1Q3LI63 56 aa3.2□□□□□ -1.9
GSDMB-209ENST00000479136 MT1AP04731 61 aa3.19□□□□□ -1.9
GSDMB-209ENST00000479136 KRTAP6-1Q3LI64 71 aa3.17□□□□□ -1.9
GSDMB-209ENST00000479136 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
GSDMB-209ENST00000479136 LCE3EQ5T5B0 92 aa3.12□□□□□ -1.91
GSDMB-209ENST00000479136 KRTAP5-4Q6L8H1 288 aa3.08□□□□□ -1.92
GSDMB-209ENST00000479136 SYNE1Q8NF91 8797 aaKnown RBP3.07□□□□□ -1.92
GSDMB-209ENST00000479136 KRTAP4-9Q9BYQ8 210 aa3.07□□□□□ -1.92
GSDMB-209ENST00000479136 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
GSDMB-209ENST00000479136 MT4P47944 62 aa3.05□□□□□ -1.92
GSDMB-209ENST00000479136 KRTAP6-2Q3LI66 62 aa2.93□□□□□ -1.94
GSDMB-209ENST00000479136 KRTAP4-11Q9BYQ6 195 aa2.92□□□□□ -1.94
GSDMB-209ENST00000479136 KRTAP20-2Q3LI61 65 aa2.92□□□□□ -1.94
GSDMB-209ENST00000479136 MT3P25713 68 aa2.91□□□□□ -1.94
GSDMB-209ENST00000479136 HMCN1Q96RW7 5635 aa2.85□□□□□ -1.95
GSDMB-209ENST00000479136 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
GSDMB-209ENST00000479136 KRTAP5-3Q6L8H2 238 aa2.77□□□□□ -1.97
GSDMB-209ENST00000479136 KRTAP4-2Q9BYR5 136 aa2.77□□□□□ -1.97
GSDMB-209ENST00000479136 OBSCNQ5VST9 7968 aa2.66□□□□□ -1.98
GSDMB-209ENST00000479136 AHNAK2Q8IVF2 5795 aa2.53□□□□□ -2
GSDMB-209ENST00000479136 KRTAP5-10Q6L8G5 202 aa2.43□□□□□ -2.02
GSDMB-209ENST00000479136 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
GSDMB-209ENST00000479136 LCE1BQ5T7P3 118 aa2.42□□□□□ -2.02
GSDMB-209ENST00000479136 KRTAP5-1Q6L8H4 278 aa2.42□□□□□ -2.02
GSDMB-209ENST00000479136 LCE1CQ5T751 118 aa2.33□□□□□ -2.04
GSDMB-209ENST00000479136 GPR98Q8WXG9 6306 aa2.31□□□□□ -2.04
GSDMB-209ENST00000479136 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
GSDMB-209ENST00000479136 MUC5ACP98088 5654 aa2.27□□□□□ -2.05
GSDMB-209ENST00000479136 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
GSDMB-209ENST00000479136 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.07
GSDMB-209ENST00000479136 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
GSDMB-209ENST00000479136 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
GSDMB-209ENST00000479136 MUC5BQ9HC84 5762 aaPredicted RBP2.04□□□□□ -2.08
GSDMB-209ENST00000479136 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
GSDMB-209ENST00000479136 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
GSDMB-209ENST00000479136 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
GSDMB-209ENST00000479136 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
GSDMB-209ENST00000479136 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 233.9 ms