RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 SYNE2Q8WXH0 6885 aaKnown RBP9.68□□□□□ -0.86
CHKB-208ENST00000479003 KRTAP19-4Q3LI73 84 aa9.65□□□□□ -0.86
CHKB-208ENST00000479003 KRTAP9-6A8MVA2 160 aa9.6□□□□□ -0.87
CHKB-208ENST00000479003 MUC12Q9UKN1 5478 aa9.59□□□□□ -0.87
CHKB-208ENST00000479003 MT1LQ93083 61 aa9.56□□□□□ -0.88
CHKB-208ENST00000479003 SPRR2FQ96RM1 72 aa9.54□□□□□ -0.88
CHKB-208ENST00000479003 KRTAP4-7Q9BYR0 210 aa9.51□□□□□ -0.89
CHKB-208ENST00000479003 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.47□□□□□ -0.89
CHKB-208ENST00000479003 KRTAP5-9P26371 169 aa9.39□□□□□ -0.91
CHKB-208ENST00000479003 KRTAP19-3Q7Z4W3 81 aa9.31□□□□□ -0.92
CHKB-208ENST00000479003 KRTAP2-3P0C7H8 128 aa9.26□□□□□ -0.93
CHKB-208ENST00000479003 KRTAP2-4Q9BYR9 128 aa9.26□□□□□ -0.93
CHKB-208ENST00000479003 KRTAP2-1Q9BYU5 128 aa9.26□□□□□ -0.93
CHKB-208ENST00000479003 MDN1Q9NU22 5596 aa9.26□□□□□ -0.93
CHKB-208ENST00000479003 KRTAP6-3Q3LI67 103 aa9.19□□□□□ -0.94
CHKB-208ENST00000479003 MT1GP13640 62 aa9.19□□□□□ -0.94
CHKB-208ENST00000479003 LCE5AQ5TCM9 118 aa9.16□□□□□ -0.94
CHKB-208ENST00000479003 MT1MQ8N339 61 aa9.13□□□□□ -0.95
CHKB-208ENST00000479003 LCE1AQ5T7P2 110 aa9.11□□□□□ -0.95
CHKB-208ENST00000479003 KRTAP4-3Q9BYR4 195 aa9.05□□□□□ -0.96
CHKB-208ENST00000479003 SPRR2EP22531 72 aa9.03□□□□□ -0.96
CHKB-208ENST00000479003 SPRR2BP35325 72 aa9.03□□□□□ -0.96
CHKB-208ENST00000479003 SPRR2AP35326 72 aa9.03□□□□□ -0.96
CHKB-208ENST00000479003 KRTAP9-7A8MTY7 169 aa8.93□□□□□ -0.98
CHKB-208ENST00000479003 LOC100996750A0A140TA64 210 aa8.88□□□□□ -0.99
CHKB-208ENST00000479003 DSTQ03001 7570 aaKnown RBP8.86□□□□□ -0.99
CHKB-208ENST00000479003 SPRR2DP22532 72 aa8.69□□□□□ -1.02
CHKB-208ENST00000479003 NEBP20929 6669 aa8.65□□□□□ -1.03
CHKB-208ENST00000479003 LCE3BQ5TA77 95 aa8.35□□□□□ -1.07
CHKB-208ENST00000479003 KRTAP5-5Q701N2 237 aaPredicted RBP8.24□□□□□ -1.09
CHKB-208ENST00000479003 KRTAP12-4P60329 112 aa8.08□□□□□ -1.12
CHKB-208ENST00000479003 KRTAP6-1Q3LI64 71 aa8.08□□□□□ -1.12
CHKB-208ENST00000479003 MT1AP04731 61 aa8.06□□□□□ -1.12
CHKB-208ENST00000479003 KRTAP20-1Q3LI63 56 aa7.9□□□□□ -1.15
CHKB-208ENST00000479003 KRTAP4-9Q9BYQ8 210 aa7.89□□□□□ -1.15
CHKB-208ENST00000479003 SYNE1Q8NF91 8797 aaKnown RBP7.88□□□□□ -1.15
CHKB-208ENST00000479003 KRTAP2-2Q9BYT5 123 aa7.86□□□□□ -1.15
CHKB-208ENST00000479003 KRTAP5-4Q6L8H1 288 aa7.84□□□□□ -1.15
CHKB-208ENST00000479003 LCE3DQ9BYE3 92 aa7.67□□□□□ -1.18
CHKB-208ENST00000479003 LCE4AQ5TA78 99 aa7.64□□□□□ -1.19
CHKB-208ENST00000479003 KRTAP9-4Q9BYQ2 154 aa7.64□□□□□ -1.19
CHKB-208ENST00000479003 MT4P47944 62 aa7.6□□□□□ -1.19
CHKB-208ENST00000479003 LCE3EQ5T5B0 92 aa7.57□□□□□ -1.2
CHKB-208ENST00000479003 KRTAP4-6Q9BYQ5 205 aa7.55□□□□□ -1.2
CHKB-208ENST00000479003 LCE1DQ5T752 114 aa7.45□□□□□ -1.22
CHKB-208ENST00000479003 HMCN1Q96RW7 5635 aa7.42□□□□□ -1.22
CHKB-208ENST00000479003 KRTAP6-2Q3LI66 62 aa7.4□□□□□ -1.22
CHKB-208ENST00000479003 KRTAP20-2Q3LI61 65 aa7.36□□□□□ -1.23
CHKB-208ENST00000479003 MT3P25713 68 aa7.27□□□□□ -1.25
CHKB-208ENST00000479003 PRM1P04553 51 aa7.19□□□□□ -1.26
CHKB-208ENST00000479003 KRTAP5-2Q701N4 177 aa7.12□□□□□ -1.27
CHKB-208ENST00000479003 KRTAP5-3Q6L8H2 238 aa7.09□□□□□ -1.28
CHKB-208ENST00000479003 OBSCNQ5VST9 7968 aa6.98□□□□□ -1.29
CHKB-208ENST00000479003 AHNAK2Q8IVF2 5795 aa6.5□□□□□ -1.37
CHKB-208ENST00000479003 KRTAP4-11Q9BYQ6 195 aa6.38□□□□□ -1.39
CHKB-208ENST00000479003 LCE1EQ5T753 118 aa6.29□□□□□ -1.4
CHKB-208ENST00000479003 KRTAP5-1Q6L8H4 278 aa6.19□□□□□ -1.42
CHKB-208ENST00000479003 KRTAP5-10Q6L8G5 202 aa6.16□□□□□ -1.42
CHKB-208ENST00000479003 KRTAP5-8O75690 187 aa6.14□□□□□ -1.43
CHKB-208ENST00000479003 MUC5ACP98088 5654 aa5.99□□□□□ -1.45
CHKB-208ENST00000479003 LCE1BQ5T7P3 118 aa5.99□□□□□ -1.45
CHKB-208ENST00000479003 KRTAP4-2Q9BYR5 136 aa5.94□□□□□ -1.46
CHKB-208ENST00000479003 KRTAP5-7Q6L8G8 165 aa5.89□□□□□ -1.47
CHKB-208ENST00000479003 LCE1CQ5T751 118 aa5.89□□□□□ -1.47
CHKB-208ENST00000479003 GPR98Q8WXG9 6306 aa5.85□□□□□ -1.47
CHKB-208ENST00000479003 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.5□□□□□ -1.53
CHKB-208ENST00000479003 KRTAP9-9Q9BYP9 154 aa5.49□□□□□ -1.53
CHKB-208ENST00000479003 MUC5BQ9HC84 5762 aaPredicted RBP5.37□□□□□ -1.55
CHKB-208ENST00000479003 KRTAP21-2Q3LI59 83 aa5.26□□□□□ -1.57
CHKB-208ENST00000479003 KRTAP5-11Q6L8G4 156 aa5.2□□□□□ -1.58
CHKB-208ENST00000479003 KRTAP4-12Q9BQ66 201 aa4.99□□□□□ -1.61
CHKB-208ENST00000479003 AHNAKQ09666 5890 aaKnown RBP4.84□□□□□ -1.63
CHKB-208ENST00000479003 KRTAP4-4Q9BYR3 166 aa4.73□□□□□ -1.65
CHKB-208ENST00000479003 KRTAP21-1Q3LI58 79 aa4.72□□□□□ -1.65
CHKB-208ENST00000479003 LCE1FQ5T754 118 aa4.63□□□□□ -1.67
CHKB-208ENST00000479003 PHGR1C9JFL3 82 aa4.48□□□□□ -1.69
CHKB-208ENST00000479003 MUC19Q7Z5P9 8384 aa4.2□□□□□ -1.74
CHKB-208ENST00000479003 MUC16Q8WXI7 14507 aa2.86□□□□□ -1.95
Retrieved 78 of 20,778 RNA–protein pairs in 73.5 ms