RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 Q1T7F1 81 aa2.8□□□□□ -1.96
HOXB3-209ENST00000478644 SYNE2Q8WXH0 6885 aaKnown RBP2.79□□□□□ -1.96
HOXB3-209ENST00000478644 COX7CP15954 63 aa2.77□□□□□ -1.97
HOXB3-209ENST00000478644 ATP5EP56381 51 aaPredicted RBP2.77□□□□□ -1.97
HOXB3-209ENST00000478644 DMAC1Q96GE9 116 aa2.77□□□□□ -1.97
HOXB3-209ENST00000478644 MT1BP07438 61 aa2.76□□□□□ -1.97
HOXB3-209ENST00000478644 C20orf197Q8N268 126 aa2.75□□□□□ -1.97
HOXB3-209ENST00000478644 ACYP2P14621 99 aa2.71□□□□□ -1.98
HOXB3-209ENST00000478644 KRTAP20-1Q3LI63 56 aa2.71□□□□□ -1.98
HOXB3-209ENST00000478644 SERP2Q8N6R1 65 aa2.71□□□□□ -1.98
HOXB3-209ENST00000478644 PLAC4Q8WY50 150 aa2.71□□□□□ -1.98
HOXB3-209ENST00000478644 SPTSSBQ8NFR3 76 aa2.69□□□□□ -1.98
HOXB3-209ENST00000478644 SNURFQ9Y675 71 aa2.69□□□□□ -1.98
HOXB3-209ENST00000478644 KRTAP2-3P0C7H8 128 aa2.66□□□□□ -1.98
HOXB3-209ENST00000478644 KRTAP2-4Q9BYR9 128 aa2.66□□□□□ -1.98
HOXB3-209ENST00000478644 MUC12Q9UKN1 5478 aa2.66□□□□□ -1.98
HOXB3-209ENST00000478644 CHKB-CPT1BH3BT56 60 aa2.64□□□□□ -1.99
HOXB3-209ENST00000478644 CDC42SE1Q9NRR8 79 aa2.64□□□□□ -1.99
HOXB3-209ENST00000478644 M0QZ58 72 aa2.62□□□□□ -1.99
HOXB3-209ENST00000478644 NEBP20929 6669 aa2.61□□□□□ -1.99
HOXB3-209ENST00000478644 KMT2DO14686 5537 aa2.61□□□□□ -1.99
HOXB3-209ENST00000478644 KRTAP8-1Q8IUC2 63 aa2.61□□□□□ -1.99
HOXB3-209ENST00000478644 SPRR2FQ96RM1 72 aa2.61□□□□□ -1.99
HOXB3-209ENST00000478644 COA5Q86WW8 74 aa2.6□□□□□ -1.99
HOXB3-209ENST00000478644 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
HOXB3-209ENST00000478644 H7BZZ5 65 aa2.59□□□□□ -1.99
HOXB3-209ENST00000478644 MDN1Q9NU22 5596 aa2.59□□□□□ -1.99
HOXB3-209ENST00000478644 SPRR2EP22531 72 aa2.58□□□□□ -2
HOXB3-209ENST00000478644 SPRR2BP35325 72 aa2.58□□□□□ -2
HOXB3-209ENST00000478644 SPRR2AP35326 72 aa2.58□□□□□ -2
HOXB3-209ENST00000478644 MT1XP80297 61 aa2.58□□□□□ -2
HOXB3-209ENST00000478644 PP632Q6XCG6 107 aa2.57□□□□□ -2
HOXB3-209ENST00000478644 KRTAP2-1Q9BYU5 128 aa2.57□□□□□ -2
HOXB3-209ENST00000478644 CYSTM1Q9H1C7 97 aa2.57□□□□□ -2
HOXB3-209ENST00000478644 INE1O15225 51 aa2.56□□□□□ -2
HOXB3-209ENST00000478644 SPRR5A0A1B0GTR4 108 aa2.52□□□□□ -2.01
HOXB3-209ENST00000478644 SPRR2DP22532 72 aa2.51□□□□□ -2.01
HOXB3-209ENST00000478644 KRTAP13-4Q3LI77 160 aa2.51□□□□□ -2.01
HOXB3-209ENST00000478644 A0A1B0GU69 56 aa2.45□□□□□ -2.02
HOXB3-209ENST00000478644 SPATA8Q6RVD6 105 aa2.44□□□□□ -2.02
HOXB3-209ENST00000478644 A0A0D9SG42 100 aa2.43□□□□□ -2.02
HOXB3-209ENST00000478644 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
HOXB3-209ENST00000478644 KRTAP12-1P59990 96 aa2.41□□□□□ -2.02
HOXB3-209ENST00000478644 PRR15LQ9BU68 103 aa2.41□□□□□ -2.02
HOXB3-209ENST00000478644 LINC01558Q9Y6Z2 57 aa2.41□□□□□ -2.02
HOXB3-209ENST00000478644 KRTAP19-3Q7Z4W3 81 aa2.34□□□□□ -2.03
HOXB3-209ENST00000478644 UQCR11O14957 56 aa2.33□□□□□ -2.04
HOXB3-209ENST00000478644 MT1GP13640 62 aa2.33□□□□□ -2.04
HOXB3-209ENST00000478644 GPR98Q8WXG9 6306 aa2.32□□□□□ -2.04
HOXB3-209ENST00000478644 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
HOXB3-209ENST00000478644 MT1EP04732 61 aa2.31□□□□□ -2.04
HOXB3-209ENST00000478644 KRTAP19-7Q3SYF9 63 aa2.31□□□□□ -2.04
HOXB3-209ENST00000478644 C10orf95Q9H7T3 257 aa2.3□□□□□ -2.04
HOXB3-209ENST00000478644 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
HOXB3-209ENST00000478644 TNP1P09430 55 aa2.27□□□□□ -2.05
HOXB3-209ENST00000478644 KRTAP19-5Q3LI72 72 aa2.26□□□□□ -2.05
HOXB3-209ENST00000478644 DSTQ03001 7570 aaKnown RBP2.23□□□□□ -2.05
HOXB3-209ENST00000478644 MT1MQ8N339 61 aa2.2□□□□□ -2.06
HOXB3-209ENST00000478644 MT1LQ93083 61 aa2.2□□□□□ -2.06
HOXB3-209ENST00000478644 KRTAP12-3P60328 96 aa2.16□□□□□ -2.06
HOXB3-209ENST00000478644 MT4P47944 62 aa2.15□□□□□ -2.07
HOXB3-209ENST00000478644 HMCN1Q96RW7 5635 aa2.14□□□□□ -2.07
HOXB3-209ENST00000478644 KRTAP12-4P60329 112 aa2.09□□□□□ -2.07
HOXB3-209ENST00000478644 KRTAP5-10Q6L8G5 202 aa2.09□□□□□ -2.07
HOXB3-209ENST00000478644 KRTAP20-2Q3LI61 65 aa2.04□□□□□ -2.08
HOXB3-209ENST00000478644 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
HOXB3-209ENST00000478644 AHNAK2Q8IVF2 5795 aa2□□□□□ -2.09
HOXB3-209ENST00000478644 SYNE1Q8NF91 8797 aaKnown RBP1.95□□□□□ -2.1
HOXB3-209ENST00000478644 MT1AP04731 61 aa1.89□□□□□ -2.11
HOXB3-209ENST00000478644 KRTAP6-1Q3LI64 71 aa1.84□□□□□ -2.11
HOXB3-209ENST00000478644 KRTAP6-2Q3LI66 62 aa1.78□□□□□ -2.12
HOXB3-209ENST00000478644 AHNAKQ09666 5890 aaKnown RBP1.76□□□□□ -2.13
HOXB3-209ENST00000478644 MUC5BQ9HC84 5762 aaPredicted RBP1.72□□□□□ -2.13
HOXB3-209ENST00000478644 MUC5ACP98088 5654 aa1.69□□□□□ -2.14
HOXB3-209ENST00000478644 PHGR1C9JFL3 82 aa1.23□□□□□ -2.21
HOXB3-209ENST00000478644 PRM1P04553 51 aa1.05□□□□□ -2.24
HOXB3-209ENST00000478644 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
HOXB3-209ENST00000478644 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 37.7 ms