RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 A6NED7 52 aa6.83□□□□□ -1.32
SREBF1-212ENST00000478616 C10orf95Q9H7T3 257 aa6.83□□□□□ -1.32
SREBF1-212ENST00000478616 DSTQ03001 7570 aaKnown RBP6.79□□□□□ -1.32
SREBF1-212ENST00000478616 LCE3AQ5TA76 89 aa6.73□□□□□ -1.33
SREBF1-212ENST00000478616 MT1GP13640 62 aa6.72□□□□□ -1.33
SREBF1-212ENST00000478616 MT1LQ93083 61 aa6.71□□□□□ -1.34
SREBF1-212ENST00000478616 KRTAP4-12Q9BQ66 201 aa6.71□□□□□ -1.34
SREBF1-212ENST00000478616 PRO0628Q9UI54 55 aa6.71□□□□□ -1.34
SREBF1-212ENST00000478616 K7ERS5 55 aa6.7□□□□□ -1.34
SREBF1-212ENST00000478616 GPR98Q8WXG9 6306 aa6.68□□□□□ -1.34
SREBF1-212ENST00000478616 MT1MQ8N339 61 aa6.68□□□□□ -1.34
SREBF1-212ENST00000478616 TNP1P09430 55 aa6.62□□□□□ -1.35
SREBF1-212ENST00000478616 BRK1Q8WUW1 75 aa6.62□□□□□ -1.35
SREBF1-212ENST00000478616 CDC42SE1Q9NRR8 79 aa6.62□□□□□ -1.35
SREBF1-212ENST00000478616 KRTAP4-9Q9BYQ8 210 aa6.61□□□□□ -1.35
SREBF1-212ENST00000478616 KRTAP4-3Q9BYR4 195 aa6.59□□□□□ -1.35
SREBF1-212ENST00000478616 PP632Q6XCG6 107 aa6.55□□□□□ -1.36
SREBF1-212ENST00000478616 KRTAP9-9Q9BYP9 154 aa6.53□□□□□ -1.36
SREBF1-212ENST00000478616 KRTAP9-4Q9BYQ2 154 aa6.53□□□□□ -1.36
SREBF1-212ENST00000478616 LCE1DQ5T752 114 aa6.46□□□□□ -1.38
SREBF1-212ENST00000478616 KRTAP25-1Q3LHN0 102 aa6.45□□□□□ -1.38
SREBF1-212ENST00000478616 KRTAP4-7Q9BYR0 210 aa6.45□□□□□ -1.38
SREBF1-212ENST00000478616 KRTAP12-3P60328 96 aa6.42□□□□□ -1.38
SREBF1-212ENST00000478616 LCE4AQ5TA78 99 aa6.39□□□□□ -1.39
SREBF1-212ENST00000478616 KRTAP5-4Q6L8H1 288 aa6.39□□□□□ -1.39
SREBF1-212ENST00000478616 ROMO1P60602 79 aa6.36□□□□□ -1.39
SREBF1-212ENST00000478616 HMCN1Q96RW7 5635 aa6.34□□□□□ -1.39
SREBF1-212ENST00000478616 MT4P47944 62 aa6.34□□□□□ -1.39
SREBF1-212ENST00000478616 PMAIP1Q13794 54 aa6.29□□□□□ -1.4
SREBF1-212ENST00000478616 KRTAP23-1A1A580 65 aa6.23□□□□□ -1.41
SREBF1-212ENST00000478616 KRTAP5-5Q701N2 237 aaPredicted RBP6.18□□□□□ -1.42
SREBF1-212ENST00000478616 KTN1-AS1Q86SY8 53 aa6.17□□□□□ -1.42
SREBF1-212ENST00000478616 AHNAK2Q8IVF2 5795 aa6.13□□□□□ -1.43
SREBF1-212ENST00000478616 KRTAP5-10Q6L8G5 202 aa6.02□□□□□ -1.45
SREBF1-212ENST00000478616 KRTAP20-2Q3LI61 65 aa6□□□□□ -1.45
SREBF1-212ENST00000478616 KRTAP15-1Q3LI76 137 aa5.99□□□□□ -1.45
SREBF1-212ENST00000478616 KRTAP19-4Q3LI73 84 aa5.96□□□□□ -1.46
SREBF1-212ENST00000478616 SYNE1Q8NF91 8797 aaKnown RBP5.94□□□□□ -1.46
SREBF1-212ENST00000478616 LCE3CQ5T5A8 94 aa5.93□□□□□ -1.46
SREBF1-212ENST00000478616 KRTAP4-2Q9BYR5 136 aa5.93□□□□□ -1.46
SREBF1-212ENST00000478616 SPRR5A0A1B0GTR4 108 aa5.92□□□□□ -1.46
SREBF1-212ENST00000478616 KRTAP5-3Q6L8H2 238 aa5.87□□□□□ -1.47
SREBF1-212ENST00000478616 KRTAP4-11Q9BYQ6 195 aa5.85□□□□□ -1.47
SREBF1-212ENST00000478616 KRTAP12-4P60329 112 aa5.81□□□□□ -1.48
SREBF1-212ENST00000478616 KRTAP5-7Q6L8G8 165 aa5.81□□□□□ -1.48
SREBF1-212ENST00000478616 H3BS24 57 aa5.79□□□□□ -1.48
SREBF1-212ENST00000478616 KRTAP9-6A8MVA2 160 aa5.75□□□□□ -1.49
SREBF1-212ENST00000478616 PRAC1Q96KF2 57 aa5.72□□□□□ -1.49
SREBF1-212ENST00000478616 KRTAP6-1Q3LI64 71 aa5.7□□□□□ -1.5
SREBF1-212ENST00000478616 MT1AP04731 61 aa5.68□□□□□ -1.5
SREBF1-212ENST00000478616 KRTAP5-2Q701N4 177 aa5.62□□□□□ -1.51
SREBF1-212ENST00000478616 KRTAP6-2Q3LI66 62 aa5.4□□□□□ -1.54
SREBF1-212ENST00000478616 KRTAP5-8O75690 187 aa5.32□□□□□ -1.56
SREBF1-212ENST00000478616 OBSCNQ5VST9 7968 aa5.14□□□□□ -1.59
SREBF1-212ENST00000478616 MT3P25713 68 aa5.13□□□□□ -1.59
SREBF1-212ENST00000478616 AHNAKQ09666 5890 aaKnown RBP5.07□□□□□ -1.6
SREBF1-212ENST00000478616 MUC5ACP98088 5654 aa5.05□□□□□ -1.6
SREBF1-212ENST00000478616 KRTAP5-1Q6L8H4 278 aa5.04□□□□□ -1.6
SREBF1-212ENST00000478616 MUC5BQ9HC84 5762 aaPredicted RBP5.03□□□□□ -1.6
SREBF1-212ENST00000478616 NDUFAF8A1L188 74 aa4.84□□□□□ -1.63
SREBF1-212ENST00000478616 LUZP6Q538Z0 58 aa4.81□□□□□ -1.64
SREBF1-212ENST00000478616 LCE1EQ5T753 118 aa4.74□□□□□ -1.65
SREBF1-212ENST00000478616 A0A0A0MQY5 61 aa4.54□□□□□ -1.68
SREBF1-212ENST00000478616 LCE1BQ5T7P3 118 aa4.44□□□□□ -1.7
SREBF1-212ENST00000478616 LCE1CQ5T751 118 aa4.41□□□□□ -1.7
SREBF1-212ENST00000478616 LCE3DQ9BYE3 92 aa4.23□□□□□ -1.73
SREBF1-212ENST00000478616 INE1O15225 51 aa4.14□□□□□ -1.75
SREBF1-212ENST00000478616 LCE3EQ5T5B0 92 aa4.06□□□□□ -1.76
SREBF1-212ENST00000478616 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.06□□□□□ -1.76
SREBF1-212ENST00000478616 KRTAP5-11Q6L8G4 156 aa4.01□□□□□ -1.77
SREBF1-212ENST00000478616 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
SREBF1-212ENST00000478616 KRTAP21-2Q3LI59 83 aa3.79□□□□□ -1.8
SREBF1-212ENST00000478616 PHGR1C9JFL3 82 aa3.52□□□□□ -1.85
SREBF1-212ENST00000478616 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
SREBF1-212ENST00000478616 PRM1P04553 51 aa3.3□□□□□ -1.88
SREBF1-212ENST00000478616 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
SREBF1-212ENST00000478616 KRTAP21-1Q3LI58 79 aa2.68□□□□□ -1.98
SREBF1-212ENST00000478616 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 72.2 ms