RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 FAT4Q6V0I7 4981 aa1.51□□□□□ -2.17
CDC42BPA-212ENST00000478573 KRTAP19-2Q3LHN2 52 aa1.51□□□□□ -2.17
CDC42BPA-212ENST00000478573 WFDC13Q8IUB5 93 aa1.51□□□□□ -2.17
CDC42BPA-212ENST00000478573 Q96NJ1 140 aa1.51□□□□□ -2.17
CDC42BPA-212ENST00000478573 DMAC1Q96GE9 116 aa1.5□□□□□ -2.17
CDC42BPA-212ENST00000478573 MT1HP80294 61 aa1.49□□□□□ -2.17
CDC42BPA-212ENST00000478573 SPATA8Q6RVD6 105 aa1.49□□□□□ -2.17
CDC42BPA-212ENST00000478573 UQCR11O14957 56 aa1.48□□□□□ -2.17
CDC42BPA-212ENST00000478573 MUC2Q02817 5179 aa1.47□□□□□ -2.17
CDC42BPA-212ENST00000478573 COX6B2Q6YFQ2 88 aa1.47□□□□□ -2.17
CDC42BPA-212ENST00000478573 SPTSSBQ8NFR3 76 aa1.47□□□□□ -2.17
CDC42BPA-212ENST00000478573 A0A1B0GU69 56 aa1.45□□□□□ -2.18
CDC42BPA-212ENST00000478573 SPINK7P58062 85 aa1.45□□□□□ -2.18
CDC42BPA-212ENST00000478573 LINC01554Q52M75 96 aa1.45□□□□□ -2.18
CDC42BPA-212ENST00000478573 M0R2T5 61 aa1.44□□□□□ -2.18
CDC42BPA-212ENST00000478573 MIR22HGQ0VDD5 57 aa1.44□□□□□ -2.18
CDC42BPA-212ENST00000478573 MT2AP02795 61 aa1.39□□□□□ -2.19
CDC42BPA-212ENST00000478573 MT1FP04733 61 aa1.38□□□□□ -2.19
CDC42BPA-212ENST00000478573 H1FX-AS1Q4G0G2 97 aa1.37□□□□□ -2.19
CDC42BPA-212ENST00000478573 CSAG1Q6PB30 78 aa1.36□□□□□ -2.19
CDC42BPA-212ENST00000478573 ROMO1P60602 79 aa1.35□□□□□ -2.19
CDC42BPA-212ENST00000478573 H0YAA0 97 aa1.34□□□□□ -2.19
CDC42BPA-212ENST00000478573 KRTAP19-6Q3LI70 58 aa1.34□□□□□ -2.19
CDC42BPA-212ENST00000478573 S4R3F8 94 aa1.34□□□□□ -2.19
CDC42BPA-212ENST00000478573 SSPOA2VEC9 5147 aa1.34□□□□□ -2.2
CDC42BPA-212ENST00000478573 M0QZ58 72 aa1.3□□□□□ -2.2
CDC42BPA-212ENST00000478573 KRTAP19-8Q3LI54 63 aa1.3□□□□□ -2.2
CDC42BPA-212ENST00000478573 SPRR2GQ9BYE4 73 aa1.3□□□□□ -2.2
CDC42BPA-212ENST00000478573 CRIPTQ9P021 101 aa1.29□□□□□ -2.2
CDC42BPA-212ENST00000478573 USH2AO75445 5202 aa1.29□□□□□ -2.2
CDC42BPA-212ENST00000478573 MT1BP07438 61 aa1.28□□□□□ -2.2
CDC42BPA-212ENST00000478573 FSIP2Q5CZC0 6907 aa1.26□□□□□ -2.21
CDC42BPA-212ENST00000478573 MT1XP80297 61 aa1.2□□□□□ -2.22
CDC42BPA-212ENST00000478573 MACF1Q9UPN3 7388 aaKnown RBP1.19□□□□□ -2.22
CDC42BPA-212ENST00000478573 PLAC4Q8WY50 150 aa1.19□□□□□ -2.22
CDC42BPA-212ENST00000478573 A0A0D9SG42 100 aa1.18□□□□□ -2.22
CDC42BPA-212ENST00000478573 KRTAP20-1Q3LI63 56 aa1.16□□□□□ -2.22
CDC42BPA-212ENST00000478573 KRTAP8-1Q8IUC2 63 aa1.15□□□□□ -2.23
CDC42BPA-212ENST00000478573 SPRR2FQ96RM1 72 aa1.15□□□□□ -2.23
CDC42BPA-212ENST00000478573 C10orf95Q9H7T3 257 aa1.15□□□□□ -2.23
CDC42BPA-212ENST00000478573 SYNE2Q8WXH0 6885 aaKnown RBP1.14□□□□□ -2.23
CDC42BPA-212ENST00000478573 SPRR2EP22531 72 aa1.14□□□□□ -2.23
CDC42BPA-212ENST00000478573 SPRR2BP35325 72 aa1.14□□□□□ -2.23
CDC42BPA-212ENST00000478573 SPRR2AP35326 72 aa1.14□□□□□ -2.23
CDC42BPA-212ENST00000478573 TNP1P09430 55 aa1.13□□□□□ -2.23
CDC42BPA-212ENST00000478573 KRTAP2-3P0C7H8 128 aa1.13□□□□□ -2.23
CDC42BPA-212ENST00000478573 KRTAP2-4Q9BYR9 128 aa1.13□□□□□ -2.23
CDC42BPA-212ENST00000478573 NEBP20929 6669 aa1.12□□□□□ -2.23
CDC42BPA-212ENST00000478573 SPRR2DP22532 72 aa1.11□□□□□ -2.23
CDC42BPA-212ENST00000478573 MUC12Q9UKN1 5478 aa1.1□□□□□ -2.23
CDC42BPA-212ENST00000478573 INE1O15225 51 aa1.1□□□□□ -2.23
CDC42BPA-212ENST00000478573 KMT2DO14686 5537 aa1.09□□□□□ -2.23
CDC42BPA-212ENST00000478573 KRTAP2-1Q9BYU5 128 aa1.09□□□□□ -2.23
CDC42BPA-212ENST00000478573 MDN1Q9NU22 5596 aa1.08□□□□□ -2.24
CDC42BPA-212ENST00000478573 MT1EP04732 61 aa1.07□□□□□ -2.24
CDC42BPA-212ENST00000478573 KRTAP19-7Q3SYF9 63 aa1.07□□□□□ -2.24
CDC42BPA-212ENST00000478573 KRTAP19-3Q7Z4W3 81 aa1.06□□□□□ -2.24
CDC42BPA-212ENST00000478573 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
CDC42BPA-212ENST00000478573 MT1GP13640 62 aa1.03□□□□□ -2.24
CDC42BPA-212ENST00000478573 KRTAP19-5Q3LI72 72 aa1.02□□□□□ -2.25
CDC42BPA-212ENST00000478573 MT1MQ8N339 61 aa1.02□□□□□ -2.25
CDC42BPA-212ENST00000478573 MT1LQ93083 61 aa1.02□□□□□ -2.25
CDC42BPA-212ENST00000478573 KRTAP5-10Q6L8G5 202 aa0.99□□□□□ -2.25
CDC42BPA-212ENST00000478573 MT4P47944 62 aa0.93□□□□□ -2.26
CDC42BPA-212ENST00000478573 KRTAP20-2Q3LI61 65 aa0.92□□□□□ -2.26
CDC42BPA-212ENST00000478573 DSTQ03001 7570 aaKnown RBP0.92□□□□□ -2.26
CDC42BPA-212ENST00000478573 AHNAK2Q8IVF2 5795 aa0.9□□□□□ -2.27
CDC42BPA-212ENST00000478573 MT1AP04731 61 aa0.88□□□□□ -2.27
CDC42BPA-212ENST00000478573 KRTAP6-1Q3LI64 71 aa0.85□□□□□ -2.27
CDC42BPA-212ENST00000478573 SYNE1Q8NF91 8797 aaKnown RBP0.84□□□□□ -2.27
CDC42BPA-212ENST00000478573 GPR98Q8WXG9 6306 aa0.83□□□□□ -2.28
CDC42BPA-212ENST00000478573 KRTAP6-2Q3LI66 62 aa0.8□□□□□ -2.28
CDC42BPA-212ENST00000478573 MUC5BQ9HC84 5762 aaPredicted RBP0.72□□□□□ -2.29
CDC42BPA-212ENST00000478573 MUC5ACP98088 5654 aa0.71□□□□□ -2.3
CDC42BPA-212ENST00000478573 AHNAKQ09666 5890 aaKnown RBP0.68□□□□□ -2.3
CDC42BPA-212ENST00000478573 PRM1P04553 51 aa0.65□□□□□ -2.31
CDC42BPA-212ENST00000478573 PHGR1C9JFL3 82 aa0.53□□□□□ -2.32
CDC42BPA-212ENST00000478573 KRTAP21-1Q3LI58 79 aa0.52□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms