RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 KRTAP12-1P59990 96 aa5.25□□□□□ -1.57
SMARCE1-209ENST00000478349 KRTAP19-5Q3LI72 72 aa5.24□□□□□ -1.57
SMARCE1-209ENST00000478349 A0A1B0GU69 56 aa5.22□□□□□ -1.57
SMARCE1-209ENST00000478349 H7BZZ5 65 aa5.18□□□□□ -1.58
SMARCE1-209ENST00000478349 TNP1P09430 55 aa5.14□□□□□ -1.59
SMARCE1-209ENST00000478349 MT1MQ8N339 61 aa5.14□□□□□ -1.59
SMARCE1-209ENST00000478349 MT1LQ93083 61 aa5.12□□□□□ -1.59
SMARCE1-209ENST00000478349 PRR15LQ9BU68 103 aa5.08□□□□□ -1.6
SMARCE1-209ENST00000478349 C10orf95Q9H7T3 257 aa5.08□□□□□ -1.6
SMARCE1-209ENST00000478349 A8MU10 97 aa5.07□□□□□ -1.6
SMARCE1-209ENST00000478349 MT4P47944 62 aa5.07□□□□□ -1.6
SMARCE1-209ENST00000478349 LCE3AQ5TA76 89 aa5.06□□□□□ -1.6
SMARCE1-209ENST00000478349 HMCN1Q96RW7 5635 aa5.05□□□□□ -1.6
SMARCE1-209ENST00000478349 SVIPQ8NHG7 77 aa5.03□□□□□ -1.6
SMARCE1-209ENST00000478349 ANAPC13Q9BS18 74 aa5□□□□□ -1.61
SMARCE1-209ENST00000478349 ATP5EP56381 51 aaPredicted RBP4.98□□□□□ -1.61
SMARCE1-209ENST00000478349 KRTAP5-4Q6L8H1 288 aa4.98□□□□□ -1.61
SMARCE1-209ENST00000478349 KRTAP4-3Q9BYR4 195 aa4.94□□□□□ -1.62
SMARCE1-209ENST00000478349 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
SMARCE1-209ENST00000478349 AHNAK2Q8IVF2 5795 aa4.9□□□□□ -1.62
SMARCE1-209ENST00000478349 LINC01558Q9Y6Z2 57 aa4.87□□□□□ -1.63
SMARCE1-209ENST00000478349 UQCR11O14957 56 aa4.86□□□□□ -1.63
SMARCE1-209ENST00000478349 KRTAP5-10Q6L8G5 202 aa4.84□□□□□ -1.63
SMARCE1-209ENST00000478349 CCDC179H3BU77 68 aa4.82□□□□□ -1.64
SMARCE1-209ENST00000478349 KRTAP25-1Q3LHN0 102 aa4.79□□□□□ -1.64
SMARCE1-209ENST00000478349 K7ERS5 55 aa4.77□□□□□ -1.65
SMARCE1-209ENST00000478349 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.77□□□□□ -1.65
SMARCE1-209ENST00000478349 TMEM258P61165 79 aa4.74□□□□□ -1.65
SMARCE1-209ENST00000478349 KRTAP5-11Q6L8G4 156 aa4.74□□□□□ -1.65
SMARCE1-209ENST00000478349 SPRR5A0A1B0GTR4 108 aa4.73□□□□□ -1.65
SMARCE1-209ENST00000478349 KRTAP12-4P60329 112 aa4.73□□□□□ -1.65
SMARCE1-209ENST00000478349 KRTAP20-2Q3LI61 65 aa4.72□□□□□ -1.65
SMARCE1-209ENST00000478349 MIR22HGQ0VDD5 57 aa4.71□□□□□ -1.66
SMARCE1-209ENST00000478349 KRTAP5-7Q6L8G8 165 aa4.7□□□□□ -1.66
SMARCE1-209ENST00000478349 KRTAP5-5Q701N2 237 aaPredicted RBP4.7□□□□□ -1.66
SMARCE1-209ENST00000478349 RPS28P62857 69 aaKnown RBP4.68□□□□□ -1.66
SMARCE1-209ENST00000478349 LCE1EQ5T753 118 aa4.6□□□□□ -1.67
SMARCE1-209ENST00000478349 V9GYY9 64 aa4.58□□□□□ -1.68
SMARCE1-209ENST00000478349 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
SMARCE1-209ENST00000478349 PSPHP1O15172 72 aa4.48□□□□□ -1.69
SMARCE1-209ENST00000478349 SYNE1Q8NF91 8797 aaKnown RBP4.47□□□□□ -1.69
SMARCE1-209ENST00000478349 MT3P25713 68 aa4.46□□□□□ -1.7
SMARCE1-209ENST00000478349 Q1T7F1 81 aa4.44□□□□□ -1.7
SMARCE1-209ENST00000478349 CDC42SE1Q9NRR8 79 aa4.43□□□□□ -1.7
SMARCE1-209ENST00000478349 PRO0628Q9UI54 55 aa4.42□□□□□ -1.7
SMARCE1-209ENST00000478349 A6NED7 52 aa4.39□□□□□ -1.71
SMARCE1-209ENST00000478349 MT1AP04731 61 aa4.38□□□□□ -1.71
SMARCE1-209ENST00000478349 KRTAP5-2Q701N4 177 aa4.33□□□□□ -1.72
SMARCE1-209ENST00000478349 KRTAP6-1Q3LI64 71 aa4.31□□□□□ -1.72
SMARCE1-209ENST00000478349 ROMO1P60602 79 aa4.3□□□□□ -1.72
SMARCE1-209ENST00000478349 BRK1Q8WUW1 75 aa4.29□□□□□ -1.72
SMARCE1-209ENST00000478349 KRTAP5-8O75690 187 aa4.17□□□□□ -1.74
SMARCE1-209ENST00000478349 KRTAP6-2Q3LI66 62 aa4.17□□□□□ -1.74
SMARCE1-209ENST00000478349 AHNAKQ09666 5890 aaKnown RBP4.16□□□□□ -1.74
SMARCE1-209ENST00000478349 PMAIP1Q13794 54 aa4.15□□□□□ -1.75
SMARCE1-209ENST00000478349 KRTAP9-6A8MVA2 160 aa4.14□□□□□ -1.75
SMARCE1-209ENST00000478349 MUC5ACP98088 5654 aa4.13□□□□□ -1.75
SMARCE1-209ENST00000478349 KRTAP5-1Q6L8H4 278 aa4.13□□□□□ -1.75
SMARCE1-209ENST00000478349 OBSCNQ5VST9 7968 aa4.08□□□□□ -1.76
SMARCE1-209ENST00000478349 MUC5BQ9HC84 5762 aaPredicted RBP4.07□□□□□ -1.76
SMARCE1-209ENST00000478349 KTN1-AS1Q86SY8 53 aa4.05□□□□□ -1.76
SMARCE1-209ENST00000478349 KRTAP4-4Q9BYR3 166 aa3.96□□□□□ -1.78
SMARCE1-209ENST00000478349 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
SMARCE1-209ENST00000478349 A0A0A0MQY5 61 aa3.77□□□□□ -1.81
SMARCE1-209ENST00000478349 PRAC1Q96KF2 57 aa3.74□□□□□ -1.81
SMARCE1-209ENST00000478349 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
SMARCE1-209ENST00000478349 LCE1CQ5T751 118 aa3.47□□□□□ -1.85
SMARCE1-209ENST00000478349 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
SMARCE1-209ENST00000478349 NDUFAF8A1L188 74 aa3.36□□□□□ -1.87
SMARCE1-209ENST00000478349 LCE3DQ9BYE3 92 aa3.24□□□□□ -1.89
SMARCE1-209ENST00000478349 LUZP6Q538Z0 58 aa3.03□□□□□ -1.92
SMARCE1-209ENST00000478349 PHGR1C9JFL3 82 aa2.87□□□□□ -1.95
SMARCE1-209ENST00000478349 KRTAP21-2Q3LI59 83 aa2.83□□□□□ -1.96
SMARCE1-209ENST00000478349 INE1O15225 51 aa2.71□□□□□ -1.98
SMARCE1-209ENST00000478349 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
SMARCE1-209ENST00000478349 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
SMARCE1-209ENST00000478349 PRM1P04553 51 aa2.15□□□□□ -2.07
SMARCE1-209ENST00000478349 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 119.7 ms