RNA–Protein interactions for RNA: ENST00000478216.1

RC3H2-208, Transcript of ring finger and CCCH-type domains 2, human

TSL 3

Gene RC3H2, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RC3H2-208	ENST00000478216	SPANXA2-OT1	Q8N9U9	137 aa		4.71	□□□□□ -1.66
RC3H2-208	ENST00000478216	KRTAP4-12	Q9BQ66	201 aa		4.68	□□□□□ -1.66
RC3H2-208	ENST00000478216	COA5	Q86WW8	74 aa		4.66	□□□□□ -1.66
RC3H2-208	ENST00000478216	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.65	□□□□□ -1.67
RC3H2-208	ENST00000478216	KRTAP12-3	P60328	96 aa		4.61	□□□□□ -1.67
RC3H2-208	ENST00000478216	SMIM26	A0A096LP01	95 aa		4.6	□□□□□ -1.67
RC3H2-208	ENST00000478216		A0A1B0GV90	55 aa		4.57	□□□□□ -1.68
RC3H2-208	ENST00000478216	KRTAP9-9	Q9BYP9	154 aa		4.56	□□□□□ -1.68
RC3H2-208	ENST00000478216	KRTAP9-4	Q9BYQ2	154 aa		4.56	□□□□□ -1.68
RC3H2-208	ENST00000478216		A8MU10	97 aa		4.55	□□□□□ -1.68
RC3H2-208	ENST00000478216	KRTAP4-11	Q9BYQ6	195 aa		4.52	□□□□□ -1.69
RC3H2-208	ENST00000478216	SERP2	Q8N6R1	65 aa		4.49	□□□□□ -1.69
RC3H2-208	ENST00000478216	SYNE1	Q8NF91	8797 aa	Known RBP	4.47	□□□□□ -1.69
RC3H2-208	ENST00000478216		A0A1B0GU69	56 aa		4.47	□□□□□ -1.69
RC3H2-208	ENST00000478216	AHNAK	Q09666	5890 aa	Known RBP	4.44	□□□□□ -1.7
RC3H2-208	ENST00000478216	MUC5AC	P98088	5654 aa		4.42	□□□□□ -1.7
RC3H2-208	ENST00000478216	KRTAP5-8	O75690	187 aa		4.38	□□□□□ -1.71
RC3H2-208	ENST00000478216	KRTAP5-2	Q701N4	177 aa		4.34	□□□□□ -1.71
RC3H2-208	ENST00000478216		K7ERU9	68 aa		4.32	□□□□□ -1.72
RC3H2-208	ENST00000478216	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.31	□□□□□ -1.72
RC3H2-208	ENST00000478216	MT1A	P04731	61 aa		4.25	□□□□□ -1.73
RC3H2-208	ENST00000478216	KRTAP6-1	Q3LI64	71 aa		4.25	□□□□□ -1.73
RC3H2-208	ENST00000478216	KRTAP19-4	Q3LI73	84 aa		4.24	□□□□□ -1.73
RC3H2-208	ENST00000478216	KRTAP25-1	Q3LHN0	102 aa		4.23	□□□□□ -1.73
RC3H2-208	ENST00000478216	PRR15L	Q9BU68	103 aa		4.22	□□□□□ -1.73
RC3H2-208	ENST00000478216		H7BZZ5	65 aa		4.19	□□□□□ -1.74
RC3H2-208	ENST00000478216	LCE3C	Q5T5A8	94 aa		4.19	□□□□□ -1.74
RC3H2-208	ENST00000478216	KRTAP6-2	Q3LI66	62 aa		4.17	□□□□□ -1.74
RC3H2-208	ENST00000478216	COX7C	P15954	63 aa		4.16	□□□□□ -1.74
RC3H2-208	ENST00000478216	KRTAP15-1	Q3LI76	137 aa		4.15	□□□□□ -1.75
RC3H2-208	ENST00000478216	KRTAP4-2	Q9BYR5	136 aa		4.15	□□□□□ -1.75
RC3H2-208	ENST00000478216	OBSCN	Q5VST9	7968 aa		4.14	□□□□□ -1.75
RC3H2-208	ENST00000478216	UQCR11	O14957	56 aa		4.02	□□□□□ -1.77
RC3H2-208	ENST00000478216		K7ERS5	55 aa		3.98	□□□□□ -1.77
RC3H2-208	ENST00000478216	LINC01558	Q9Y6Z2	57 aa		3.98	□□□□□ -1.77
RC3H2-208	ENST00000478216	KRTAP5-1	Q6L8H4	278 aa		3.97	□□□□□ -1.77
RC3H2-208	ENST00000478216	KRTAP23-1	A1A580	65 aa		3.94	□□□□□ -1.78
RC3H2-208	ENST00000478216	MT3	P25713	68 aa		3.92	□□□□□ -1.78
RC3H2-208	ENST00000478216	KRTAP9-6	A8MVA2	160 aa		3.91	□□□□□ -1.78
RC3H2-208	ENST00000478216		H3BS24	57 aa		3.91	□□□□□ -1.78
RC3H2-208	ENST00000478216	MIR22HG	Q0VDD5	57 aa		3.91	□□□□□ -1.78
RC3H2-208	ENST00000478216	ATP5E	P56381	51 aa	Predicted RBP	3.84	□□□□□ -1.79
RC3H2-208	ENST00000478216	ANAPC13	Q9BS18	74 aa		3.83	□□□□□ -1.8
RC3H2-208	ENST00000478216	RPS28	P62857	69 aa	Known RBP	3.79	□□□□□ -1.8
RC3H2-208	ENST00000478216	CCDC179	H3BU77	68 aa		3.72	□□□□□ -1.81
RC3H2-208	ENST00000478216	CDC42SE1	Q9NRR8	79 aa		3.68	□□□□□ -1.82
RC3H2-208	ENST00000478216	LCE1E	Q5T753	118 aa		3.66	□□□□□ -1.82
RC3H2-208	ENST00000478216	PSPHP1	O15172	72 aa		3.6	□□□□□ -1.83
RC3H2-208	ENST00000478216	LCE1B	Q5T7P3	118 aa		3.59	□□□□□ -1.83
RC3H2-208	ENST00000478216		Q1T7F1	81 aa		3.57	□□□□□ -1.84
RC3H2-208	ENST00000478216	ROMO1	P60602	79 aa		3.56	□□□□□ -1.84
RC3H2-208	ENST00000478216	TMEM258	P61165	79 aa		3.56	□□□□□ -1.84
RC3H2-208	ENST00000478216		V9GYY9	64 aa		3.49	□□□□□ -1.85
RC3H2-208	ENST00000478216		A6NED7	52 aa		3.47	□□□□□ -1.85
RC3H2-208	ENST00000478216	LCE1C	Q5T751	118 aa		3.39	□□□□□ -1.87
RC3H2-208	ENST00000478216	KRTAP5-11	Q6L8G4	156 aa		3.14	□□□□□ -1.91
RC3H2-208	ENST00000478216	LCE1F	Q5T754	118 aa		3.13	□□□□□ -1.91
RC3H2-208	ENST00000478216	PHGR1	C9JFL3	82 aa		3.12	□□□□□ -1.91
RC3H2-208	ENST00000478216	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3	□□□□□ -1.93
RC3H2-208	ENST00000478216	LCE3D	Q9BYE3	92 aa		2.95	□□□□□ -1.94
RC3H2-208	ENST00000478216	KRTAP21-2	Q3LI59	83 aa		2.77	□□□□□ -1.97
RC3H2-208	ENST00000478216	SVIP	Q8NHG7	77 aa		2.73	□□□□□ -1.97
RC3H2-208	ENST00000478216	LCE3E	Q5T5B0	92 aa		2.7	□□□□□ -1.98
RC3H2-208	ENST00000478216	KRTAP4-4	Q9BYR3	166 aa		2.68	□□□□□ -1.98
RC3H2-208	ENST00000478216	MUC19	Q7Z5P9	8384 aa		2.57	□□□□□ -2
RC3H2-208	ENST00000478216	PCP4	P48539	62 aa		2.51	□□□□□ -2.01
RC3H2-208	ENST00000478216	BRK1	Q8WUW1	75 aa		2.45	□□□□□ -2.02
RC3H2-208	ENST00000478216	KRTAP21-1	Q3LI58	79 aa		2.36	□□□□□ -2.03
RC3H2-208	ENST00000478216	PRAC1	Q96KF2	57 aa		2.3	□□□□□ -2.04
RC3H2-208	ENST00000478216	PMAIP1	Q13794	54 aa		2.24	□□□□□ -2.05
RC3H2-208	ENST00000478216	PRO0628	Q9UI54	55 aa		2.1	□□□□□ -2.07
RC3H2-208	ENST00000478216	LUZP6	Q538Z0	58 aa		2.08	□□□□□ -2.08
RC3H2-208	ENST00000478216		A0A0A0MQY5	61 aa		1.9	□□□□□ -2.11
RC3H2-208	ENST00000478216	KTN1-AS1	Q86SY8	53 aa		1.89	□□□□□ -2.11
RC3H2-208	ENST00000478216	MUC16	Q8WXI7	14507 aa		1.83	□□□□□ -2.12
RC3H2-208	ENST00000478216	PRM1	P04553	51 aa		1.8	□□□□□ -2.12
RC3H2-208	ENST00000478216	NDUFAF8	A1L188	74 aa		1.67	□□□□□ -2.14
RC3H2-208	ENST00000478216	INE1	O15225	51 aa		1.35	□□□□□ -2.19

Retrieved 78 of 20,778 RNA–protein pairs in 81.2 ms