RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 MT1GP13640 62 aa7.98□□□□□ -1.13
SF1-214ENST00000477596 PCP4P48539 62 aa7.94□□□□□ -1.14
SF1-214ENST00000477596 MT1MQ8N339 61 aa7.91□□□□□ -1.14
SF1-214ENST00000477596 K7ERS5 55 aa7.89□□□□□ -1.15
SF1-214ENST00000477596 PP632Q6XCG6 107 aa7.88□□□□□ -1.15
SF1-214ENST00000477596 A6NED7 52 aa7.85□□□□□ -1.15
SF1-214ENST00000477596 KRTAP12-3P60328 96 aa7.82□□□□□ -1.16
SF1-214ENST00000477596 KRTAP25-1Q3LHN0 102 aa7.82□□□□□ -1.16
SF1-214ENST00000477596 RPS28P62857 69 aaKnown RBP7.8□□□□□ -1.16
SF1-214ENST00000477596 KRTAP4-3Q9BYR4 195 aa7.79□□□□□ -1.16
SF1-214ENST00000477596 KRTAP4-7Q9BYR0 210 aa7.67□□□□□ -1.18
SF1-214ENST00000477596 KRTAP4-9Q9BYQ8 210 aa7.65□□□□□ -1.18
SF1-214ENST00000477596 CDC42SE1Q9NRR8 79 aa7.55□□□□□ -1.2
SF1-214ENST00000477596 KRTAP23-1A1A580 65 aa7.49□□□□□ -1.21
SF1-214ENST00000477596 LCE1DQ5T752 114 aa7.48□□□□□ -1.21
SF1-214ENST00000477596 ROMO1P60602 79 aa7.46□□□□□ -1.22
SF1-214ENST00000477596 LCE4AQ5TA78 99 aa7.46□□□□□ -1.22
SF1-214ENST00000477596 MT4P47944 62 aa7.43□□□□□ -1.22
SF1-214ENST00000477596 KRTAP5-4Q6L8H1 288 aa7.4□□□□□ -1.22
SF1-214ENST00000477596 HMCN1Q96RW7 5635 aa7.38□□□□□ -1.23
SF1-214ENST00000477596 KRTAP15-1Q3LI76 137 aa7.36□□□□□ -1.23
SF1-214ENST00000477596 GPR98Q8WXG9 6306 aa7.28□□□□□ -1.24
SF1-214ENST00000477596 LOC100996750A0A140TA64 210 aa7.25□□□□□ -1.25
SF1-214ENST00000477596 KRTAP4-6Q9BYQ5 205 aa7.25□□□□□ -1.25
SF1-214ENST00000477596 KRTAP19-4Q3LI73 84 aa7.23□□□□□ -1.25
SF1-214ENST00000477596 KRTAP5-5Q701N2 237 aaPredicted RBP7.23□□□□□ -1.25
SF1-214ENST00000477596 LCE3CQ5T5A8 94 aa7.21□□□□□ -1.26
SF1-214ENST00000477596 AHNAK2Q8IVF2 5795 aa7.09□□□□□ -1.27
SF1-214ENST00000477596 KRTAP20-2Q3LI61 65 aa6.99□□□□□ -1.29
SF1-214ENST00000477596 SYNE1Q8NF91 8797 aaKnown RBP6.99□□□□□ -1.29
SF1-214ENST00000477596 BRK1Q8WUW1 75 aa6.94□□□□□ -1.3
SF1-214ENST00000477596 SPRR5A0A1B0GTR4 108 aa6.92□□□□□ -1.3
SF1-214ENST00000477596 KRTAP12-4P60329 112 aa6.92□□□□□ -1.3
SF1-214ENST00000477596 KRTAP9-6A8MVA2 160 aa6.88□□□□□ -1.31
SF1-214ENST00000477596 KRTAP5-10Q6L8G5 202 aa6.83□□□□□ -1.32
SF1-214ENST00000477596 MT1AP04731 61 aa6.78□□□□□ -1.32
SF1-214ENST00000477596 KRTAP6-1Q3LI64 71 aa6.77□□□□□ -1.33
SF1-214ENST00000477596 KRTAP5-3Q6L8H2 238 aa6.77□□□□□ -1.33
SF1-214ENST00000477596 KRTAP5-2Q701N4 177 aa6.53□□□□□ -1.36
SF1-214ENST00000477596 PMAIP1Q13794 54 aa6.52□□□□□ -1.37
SF1-214ENST00000477596 KRTAP9-4Q9BYQ2 154 aa6.52□□□□□ -1.37
SF1-214ENST00000477596 KRTAP5-7Q6L8G8 165 aa6.51□□□□□ -1.37
SF1-214ENST00000477596 KRTAP6-2Q3LI66 62 aa6.42□□□□□ -1.38
SF1-214ENST00000477596 PRAC1Q96KF2 57 aa6.34□□□□□ -1.39
SF1-214ENST00000477596 KRTAP4-11Q9BYQ6 195 aa6.31□□□□□ -1.4
SF1-214ENST00000477596 MT3P25713 68 aa6.16□□□□□ -1.42
SF1-214ENST00000477596 PRO0628Q9UI54 55 aa6.16□□□□□ -1.42
SF1-214ENST00000477596 KRTAP5-8O75690 187 aa6.12□□□□□ -1.43
SF1-214ENST00000477596 OBSCNQ5VST9 7968 aa6.11□□□□□ -1.43
SF1-214ENST00000477596 SVIPQ8NHG7 77 aa6.05□□□□□ -1.44
SF1-214ENST00000477596 KTN1-AS1Q86SY8 53 aa5.85□□□□□ -1.47
SF1-214ENST00000477596 KRTAP5-1Q6L8H4 278 aa5.83□□□□□ -1.48
SF1-214ENST00000477596 MUC5BQ9HC84 5762 aaPredicted RBP5.77□□□□□ -1.49
SF1-214ENST00000477596 MUC5ACP98088 5654 aa5.77□□□□□ -1.49
SF1-214ENST00000477596 AHNAKQ09666 5890 aaKnown RBP5.76□□□□□ -1.49
SF1-214ENST00000477596 KRTAP9-9Q9BYP9 154 aa5.71□□□□□ -1.5
SF1-214ENST00000477596 LCE1EQ5T753 118 aa5.58□□□□□ -1.52
SF1-214ENST00000477596 KRTAP4-2Q9BYR5 136 aa5.34□□□□□ -1.55
SF1-214ENST00000477596 LCE1BQ5T7P3 118 aa5.32□□□□□ -1.56
SF1-214ENST00000477596 LUZP6Q538Z0 58 aa5.31□□□□□ -1.56
SF1-214ENST00000477596 LCE3DQ9BYE3 92 aa5.22□□□□□ -1.57
SF1-214ENST00000477596 LCE1CQ5T751 118 aa5.2□□□□□ -1.58
SF1-214ENST00000477596 LCE3EQ5T5B0 92 aa4.94□□□□□ -1.62
SF1-214ENST00000477596 KRTAP4-12Q9BQ66 201 aa4.79□□□□□ -1.64
SF1-214ENST00000477596 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.75□□□□□ -1.65
SF1-214ENST00000477596 KRTAP5-11Q6L8G4 156 aa4.71□□□□□ -1.66
SF1-214ENST00000477596 LCE1FQ5T754 118 aa4.47□□□□□ -1.69
SF1-214ENST00000477596 KRTAP21-2Q3LI59 83 aa4.44□□□□□ -1.7
SF1-214ENST00000477596 NDUFAF8A1L188 74 aa4.39□□□□□ -1.71
SF1-214ENST00000477596 H3BS24 57 aa4.16□□□□□ -1.74
SF1-214ENST00000477596 KRTAP4-4Q9BYR3 166 aa4.09□□□□□ -1.75
SF1-214ENST00000477596 PHGR1C9JFL3 82 aa4.07□□□□□ -1.76
SF1-214ENST00000477596 PRM1P04553 51 aa3.87□□□□□ -1.79
SF1-214ENST00000477596 A0A0A0MQY5 61 aa3.83□□□□□ -1.8
SF1-214ENST00000477596 MUC19Q7Z5P9 8384 aa3.77□□□□□ -1.81
SF1-214ENST00000477596 INE1O15225 51 aa3.59□□□□□ -1.83
SF1-214ENST00000477596 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
SF1-214ENST00000477596 MUC16Q8WXI7 14507 aa2.65□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 10.1 ms