RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 KRTAP10-10P60014 251 aa2.4□□□□□ -2.03
VPS45-207ENST00000477558 PP632Q6XCG6 107 aa2.4□□□□□ -2.03
VPS45-207ENST00000477558 S4R3F8 94 aa2.4□□□□□ -2.03
VPS45-207ENST00000477558 SPRR5A0A1B0GTR4 108 aa2.39□□□□□ -2.03
VPS45-207ENST00000477558 A0A1B0GU33 70 aa2.39□□□□□ -2.03
VPS45-207ENST00000477558 SPATA8Q6RVD6 105 aa2.39□□□□□ -2.03
VPS45-207ENST00000477558 CSAG1Q6PB30 78 aa2.38□□□□□ -2.03
VPS45-207ENST00000477558 KRTAP25-1Q3LHN0 102 aa2.37□□□□□ -2.03
VPS45-207ENST00000477558 DMAC1Q96GE9 116 aa2.36□□□□□ -2.03
VPS45-207ENST00000477558 H0YAA0 97 aa2.35□□□□□ -2.03
VPS45-207ENST00000477558 MIR22HGQ0VDD5 57 aa2.35□□□□□ -2.03
VPS45-207ENST00000477558 SPRR2GQ9BYE4 73 aa2.35□□□□□ -2.03
VPS45-207ENST00000477558 A0A1B0GU69 56 aa2.34□□□□□ -2.03
VPS45-207ENST00000477558 KRTAP19-6Q3LI70 58 aa2.34□□□□□ -2.03
VPS45-207ENST00000477558 UQCR11O14957 56 aa2.34□□□□□ -2.04
VPS45-207ENST00000477558 ACYP2P14621 99 aa2.34□□□□□ -2.04
VPS45-207ENST00000477558 KRTAP19-8Q3LI54 63 aa2.34□□□□□ -2.04
VPS45-207ENST00000477558 SPINT4Q6UDR6 99 aa2.33□□□□□ -2.04
VPS45-207ENST00000477558 MACF1Q9UPN3 7388 aaKnown RBP2.32□□□□□ -2.04
VPS45-207ENST00000477558 MT1BP07438 61 aa2.32□□□□□ -2.04
VPS45-207ENST00000477558 SYNE2Q8WXH0 6885 aaKnown RBP2.31□□□□□ -2.04
VPS45-207ENST00000477558 CRIPTQ9P021 101 aa2.31□□□□□ -2.04
VPS45-207ENST00000477558 P0C880 135 aa2.3□□□□□ -2.04
VPS45-207ENST00000477558 R4GN34 69 aa2.29□□□□□ -2.04
VPS45-207ENST00000477558 PRO2289Q9P1D8 64 aa2.24□□□□□ -2.05
VPS45-207ENST00000477558 MUC12Q9UKN1 5478 aa2.21□□□□□ -2.06
VPS45-207ENST00000477558 M0QZ58 72 aa2.18□□□□□ -2.06
VPS45-207ENST00000477558 MT1XP80297 61 aa2.18□□□□□ -2.06
VPS45-207ENST00000477558 KMT2DO14686 5537 aa2.18□□□□□ -2.06
VPS45-207ENST00000477558 NEBP20929 6669 aa2.18□□□□□ -2.06
VPS45-207ENST00000477558 KRTAP6-3Q3LI67 103 aa2.16□□□□□ -2.06
VPS45-207ENST00000477558 KRTAP13-4Q3LI77 160 aa2.16□□□□□ -2.06
VPS45-207ENST00000477558 MDN1Q9NU22 5596 aa2.15□□□□□ -2.06
VPS45-207ENST00000477558 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
VPS45-207ENST00000477558 PLAC4Q8WY50 150 aa2.12□□□□□ -2.07
VPS45-207ENST00000477558 KRTAP12-1P59990 96 aa2.05□□□□□ -2.08
VPS45-207ENST00000477558 C10orf95Q9H7T3 257 aa2.03□□□□□ -2.08
VPS45-207ENST00000477558 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
VPS45-207ENST00000477558 KRTAP8-1Q8IUC2 63 aa2.02□□□□□ -2.09
VPS45-207ENST00000477558 INE1O15225 51 aa2.01□□□□□ -2.09
VPS45-207ENST00000477558 A0A0D9SG42 100 aa2□□□□□ -2.09
VPS45-207ENST00000477558 SPRR2FQ96RM1 72 aa2□□□□□ -2.09
VPS45-207ENST00000477558 KRTAP19-7Q3SYF9 63 aa1.97□□□□□ -2.09
VPS45-207ENST00000477558 SPRR2EP22531 72 aa1.95□□□□□ -2.1
VPS45-207ENST00000477558 SPRR2BP35325 72 aa1.95□□□□□ -2.1
VPS45-207ENST00000477558 SPRR2AP35326 72 aa1.95□□□□□ -2.1
VPS45-207ENST00000477558 MT1EP04732 61 aa1.92□□□□□ -2.1
VPS45-207ENST00000477558 KRTAP20-1Q3LI63 56 aa1.92□□□□□ -2.1
VPS45-207ENST00000477558 KRTAP2-3P0C7H8 128 aa1.91□□□□□ -2.1
VPS45-207ENST00000477558 KRTAP2-4Q9BYR9 128 aa1.91□□□□□ -2.1
VPS45-207ENST00000477558 TNP1P09430 55 aa1.89□□□□□ -2.11
VPS45-207ENST00000477558 SPRR2DP22532 72 aa1.89□□□□□ -2.11
VPS45-207ENST00000477558 KRTAP19-5Q3LI72 72 aa1.89□□□□□ -2.11
VPS45-207ENST00000477558 KRTAP19-3Q7Z4W3 81 aa1.89□□□□□ -2.11
VPS45-207ENST00000477558 KRTAP12-3P60328 96 aa1.88□□□□□ -2.11
VPS45-207ENST00000477558 MT1LQ93083 61 aa1.85□□□□□ -2.11
VPS45-207ENST00000477558 DSTQ03001 7570 aaKnown RBP1.85□□□□□ -2.11
VPS45-207ENST00000477558 MT1GP13640 62 aa1.84□□□□□ -2.11
VPS45-207ENST00000477558 KRTAP2-1Q9BYU5 128 aa1.84□□□□□ -2.11
VPS45-207ENST00000477558 KRTAP12-4P60329 112 aa1.83□□□□□ -2.12
VPS45-207ENST00000477558 MT1MQ8N339 61 aa1.83□□□□□ -2.12
VPS45-207ENST00000477558 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
VPS45-207ENST00000477558 GPR98Q8WXG9 6306 aa1.7□□□□□ -2.14
VPS45-207ENST00000477558 AHNAK2Q8IVF2 5795 aa1.68□□□□□ -2.14
VPS45-207ENST00000477558 SYNE1Q8NF91 8797 aaKnown RBP1.63□□□□□ -2.15
VPS45-207ENST00000477558 MT4P47944 62 aa1.63□□□□□ -2.15
VPS45-207ENST00000477558 KRTAP20-2Q3LI61 65 aa1.6□□□□□ -2.15
VPS45-207ENST00000477558 MT1AP04731 61 aa1.57□□□□□ -2.16
VPS45-207ENST00000477558 KRTAP6-1Q3LI64 71 aa1.56□□□□□ -2.16
VPS45-207ENST00000477558 KRTAP5-10Q6L8G5 202 aa1.56□□□□□ -2.16
VPS45-207ENST00000477558 KRTAP6-2Q3LI66 62 aa1.46□□□□□ -2.18
VPS45-207ENST00000477558 MUC5ACP98088 5654 aa1.4□□□□□ -2.19
VPS45-207ENST00000477558 MUC5BQ9HC84 5762 aaPredicted RBP1.39□□□□□ -2.19
VPS45-207ENST00000477558 AHNAKQ09666 5890 aaKnown RBP1.38□□□□□ -2.19
VPS45-207ENST00000477558 PRM1P04553 51 aa1.15□□□□□ -2.22
VPS45-207ENST00000477558 PHGR1C9JFL3 82 aa0.96□□□□□ -2.26
VPS45-207ENST00000477558 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
VPS45-207ENST00000477558 KRTAP21-1Q3LI58 79 aa0.78□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 74.3 ms