RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 SPRR2AP35326 72 aa5.92□□□□□ -1.46
VHL-203ENST00000477538 KRTAP12-3P60328 96 aa5.91□□□□□ -1.46
VHL-203ENST00000477538 LCE1AQ5T7P2 110 aa5.89□□□□□ -1.47
VHL-203ENST00000477538 LCE3BQ5TA77 95 aa5.88□□□□□ -1.47
VHL-203ENST00000477538 NEBP20929 6669 aa5.87□□□□□ -1.47
VHL-203ENST00000477538 MDN1Q9NU22 5596 aa5.84□□□□□ -1.48
VHL-203ENST00000477538 KRTAP19-3Q7Z4W3 81 aa5.81□□□□□ -1.48
VHL-203ENST00000477538 MT1LQ93083 61 aa5.79□□□□□ -1.48
VHL-203ENST00000477538 KRTAP9-9Q9BYP9 154 aa5.76□□□□□ -1.49
VHL-203ENST00000477538 KRTAP9-4Q9BYQ2 154 aa5.76□□□□□ -1.49
VHL-203ENST00000477538 LCE5AQ5TCM9 118 aa5.75□□□□□ -1.49
VHL-203ENST00000477538 KRTAP20-1Q3LI63 56 aa5.74□□□□□ -1.49
VHL-203ENST00000477538 MT1GP13640 62 aa5.72□□□□□ -1.49
VHL-203ENST00000477538 PRAC1Q96KF2 57 aa5.72□□□□□ -1.49
VHL-203ENST00000477538 SPRR2DP22532 72 aa5.71□□□□□ -1.5
VHL-203ENST00000477538 KRTAP15-1Q3LI76 137 aa5.7□□□□□ -1.5
VHL-203ENST00000477538 KTN1-AS1Q86SY8 53 aa5.68□□□□□ -1.5
VHL-203ENST00000477538 MT1MQ8N339 61 aa5.65□□□□□ -1.5
VHL-203ENST00000477538 KRTAP19-4Q3LI73 84 aa5.58□□□□□ -1.52
VHL-203ENST00000477538 KRTAP2-3P0C7H8 128 aa5.54□□□□□ -1.52
VHL-203ENST00000477538 KRTAP2-4Q9BYR9 128 aa5.54□□□□□ -1.52
VHL-203ENST00000477538 KRTAP4-7Q9BYR0 210 aa5.53□□□□□ -1.52
VHL-203ENST00000477538 LCE1DQ5T752 114 aa5.52□□□□□ -1.53
VHL-203ENST00000477538 KRTAP4-3Q9BYR4 195 aa5.5□□□□□ -1.53
VHL-203ENST00000477538 LCE3CQ5T5A8 94 aa5.49□□□□□ -1.53
VHL-203ENST00000477538 SVIPQ8NHG7 77 aa5.46□□□□□ -1.54
VHL-203ENST00000477538 DSTQ03001 7570 aaKnown RBP5.42□□□□□ -1.54
VHL-203ENST00000477538 KRTAP2-2Q9BYT5 123 aa5.39□□□□□ -1.55
VHL-203ENST00000477538 KRTAP2-1Q9BYU5 128 aa5.39□□□□□ -1.55
VHL-203ENST00000477538 KRTAP4-9Q9BYQ8 210 aa5.37□□□□□ -1.55
VHL-203ENST00000477538 LCE4AQ5TA78 99 aa5.32□□□□□ -1.56
VHL-203ENST00000477538 KRTAP4-2Q9BYR5 136 aa5.25□□□□□ -1.57
VHL-203ENST00000477538 GPR98Q8WXG9 6306 aa5.23□□□□□ -1.57
VHL-203ENST00000477538 KRTAP4-11Q9BYQ6 195 aa5.18□□□□□ -1.58
VHL-203ENST00000477538 KRTAP9-6A8MVA2 160 aa5.17□□□□□ -1.58
VHL-203ENST00000477538 H3BS24 57 aa5.11□□□□□ -1.59
VHL-203ENST00000477538 KRTAP5-5Q701N2 237 aaPredicted RBP5.11□□□□□ -1.59
VHL-203ENST00000477538 SPRR5A0A1B0GTR4 108 aa5.09□□□□□ -1.59
VHL-203ENST00000477538 KRTAP5-4Q6L8H1 288 aa5.07□□□□□ -1.6
VHL-203ENST00000477538 MT4P47944 62 aa4.96□□□□□ -1.62
VHL-203ENST00000477538 MT1AP04731 61 aa4.94□□□□□ -1.62
VHL-203ENST00000477538 KRTAP6-1Q3LI64 71 aa4.87□□□□□ -1.63
VHL-203ENST00000477538 KRTAP12-4P60329 112 aa4.86□□□□□ -1.63
VHL-203ENST00000477538 SYNE1Q8NF91 8797 aaKnown RBP4.77□□□□□ -1.65
VHL-203ENST00000477538 HMCN1Q96RW7 5635 aa4.77□□□□□ -1.65
VHL-203ENST00000477538 KRTAP20-2Q3LI61 65 aa4.76□□□□□ -1.65
VHL-203ENST00000477538 LUZP6Q538Z0 58 aa4.74□□□□□ -1.65
VHL-203ENST00000477538 KRTAP5-3Q6L8H2 238 aa4.66□□□□□ -1.66
VHL-203ENST00000477538 AHNAK2Q8IVF2 5795 aa4.62□□□□□ -1.67
VHL-203ENST00000477538 KRTAP6-2Q3LI66 62 aa4.56□□□□□ -1.68
VHL-203ENST00000477538 KRTAP5-2Q701N4 177 aa4.53□□□□□ -1.68
VHL-203ENST00000477538 MT3P25713 68 aa4.48□□□□□ -1.69
VHL-203ENST00000477538 KRTAP5-10Q6L8G5 202 aa4.48□□□□□ -1.69
VHL-203ENST00000477538 KRTAP5-7Q6L8G8 165 aa4.38□□□□□ -1.71
VHL-203ENST00000477538 NDUFAF8A1L188 74 aa4.33□□□□□ -1.72
VHL-203ENST00000477538 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
VHL-203ENST00000477538 KRTAP5-8O75690 187 aa4.06□□□□□ -1.76
VHL-203ENST00000477538 LCE3DQ9BYE3 92 aa4.06□□□□□ -1.76
VHL-203ENST00000477538 AHNAKQ09666 5890 aaKnown RBP4.01□□□□□ -1.77
VHL-203ENST00000477538 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
VHL-203ENST00000477538 KRTAP5-1Q6L8H4 278 aa3.97□□□□□ -1.77
VHL-203ENST00000477538 A0A0A0MQY5 61 aa3.93□□□□□ -1.78
VHL-203ENST00000477538 LCE3EQ5T5B0 92 aa3.91□□□□□ -1.78
VHL-203ENST00000477538 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
VHL-203ENST00000477538 MUC5BQ9HC84 5762 aaPredicted RBP3.85□□□□□ -1.79
VHL-203ENST00000477538 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
VHL-203ENST00000477538 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
VHL-203ENST00000477538 INE1O15225 51 aa3.56□□□□□ -1.84
VHL-203ENST00000477538 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.55□□□□□ -1.84
VHL-203ENST00000477538 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
VHL-203ENST00000477538 PRM1P04553 51 aa3.24□□□□□ -1.89
VHL-203ENST00000477538 KRTAP21-2Q3LI59 83 aa3.2□□□□□ -1.9
VHL-203ENST00000477538 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
VHL-203ENST00000477538 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
VHL-203ENST00000477538 PHGR1C9JFL3 82 aa2.84□□□□□ -1.95
VHL-203ENST00000477538 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
VHL-203ENST00000477538 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
VHL-203ENST00000477538 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 509.7 ms