RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 MT1EP04732 61 aa4.72□□□□□ -1.65
HDAC7-221ENST00000477203 SYNE2Q8WXH0 6885 aaKnown RBP4.71□□□□□ -1.66
HDAC7-221ENST00000477203 MT1LQ93083 61 aa4.68□□□□□ -1.66
HDAC7-221ENST00000477203 KRTAP9-6A8MVA2 160 aa4.67□□□□□ -1.66
HDAC7-221ENST00000477203 KRTAP4-3Q9BYR4 195 aa4.66□□□□□ -1.66
HDAC7-221ENST00000477203 SPRR2FQ96RM1 72 aa4.62□□□□□ -1.67
HDAC7-221ENST00000477203 CRCT1Q9UGL9 99 aa4.59□□□□□ -1.67
HDAC7-221ENST00000477203 LOC100996750A0A140TA64 210 aa4.55□□□□□ -1.68
HDAC7-221ENST00000477203 MDN1Q9NU22 5596 aa4.54□□□□□ -1.68
HDAC7-221ENST00000477203 MT1GP13640 62 aa4.5□□□□□ -1.69
HDAC7-221ENST00000477203 KRTAP19-3Q7Z4W3 81 aa4.47□□□□□ -1.69
HDAC7-221ENST00000477203 MT1MQ8N339 61 aa4.44□□□□□ -1.7
HDAC7-221ENST00000477203 SYNE1Q8NF91 8797 aaKnown RBP4.38□□□□□ -1.71
HDAC7-221ENST00000477203 KRTAP2-3P0C7H8 128 aa4.35□□□□□ -1.71
HDAC7-221ENST00000477203 KRTAP2-4Q9BYR9 128 aa4.35□□□□□ -1.71
HDAC7-221ENST00000477203 KRTAP2-1Q9BYU5 128 aa4.35□□□□□ -1.71
HDAC7-221ENST00000477203 LCE5AQ5TCM9 118 aa4.32□□□□□ -1.72
HDAC7-221ENST00000477203 KRTAP9-6A0A140TA67 174 aa4.32□□□□□ -1.72
HDAC7-221ENST00000477203 SPRR2EP22531 72 aa4.25□□□□□ -1.73
HDAC7-221ENST00000477203 SPRR2BP35325 72 aa4.25□□□□□ -1.73
HDAC7-221ENST00000477203 SPRR2AP35326 72 aa4.25□□□□□ -1.73
HDAC7-221ENST00000477203 OBSCNQ5VST9 7968 aa4.23□□□□□ -1.73
HDAC7-221ENST00000477203 KRTAP19-4Q3LI73 84 aa4.23□□□□□ -1.73
HDAC7-221ENST00000477203 LCE1AQ5T7P2 110 aa4.23□□□□□ -1.73
HDAC7-221ENST00000477203 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.21□□□□□ -1.74
HDAC7-221ENST00000477203 KRTAP12-4P60329 112 aa4.2□□□□□ -1.74
HDAC7-221ENST00000477203 KRTAP5-9P26371 169 aa4.15□□□□□ -1.75
HDAC7-221ENST00000477203 LCE3BQ5TA77 95 aa4.12□□□□□ -1.75
HDAC7-221ENST00000477203 SPRR2DP22532 72 aa4.06□□□□□ -1.76
HDAC7-221ENST00000477203 KRTAP4-9Q9BYQ8 210 aa4.04□□□□□ -1.76
HDAC7-221ENST00000477203 KRTAP6-1Q3LI64 71 aa4.04□□□□□ -1.76
HDAC7-221ENST00000477203 KRTAP6-3Q3LI67 103 aa4.01□□□□□ -1.77
HDAC7-221ENST00000477203 KRTAP9-7A8MTY7 169 aa4□□□□□ -1.77
HDAC7-221ENST00000477203 MT1AP04731 61 aa3.88□□□□□ -1.79
HDAC7-221ENST00000477203 NEBP20929 6669 aa3.85□□□□□ -1.79
HDAC7-221ENST00000477203 KRTAP5-5Q701N2 237 aaPredicted RBP3.85□□□□□ -1.79
HDAC7-221ENST00000477203 PRM1P04553 51 aa3.81□□□□□ -1.8
HDAC7-221ENST00000477203 MT4P47944 62 aa3.7□□□□□ -1.82
HDAC7-221ENST00000477203 KRTAP6-2Q3LI66 62 aa3.69□□□□□ -1.82
HDAC7-221ENST00000477203 KRTAP9-4Q9BYQ2 154 aa3.69□□□□□ -1.82
HDAC7-221ENST00000477203 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
HDAC7-221ENST00000477203 KRTAP4-6Q9BYQ5 205 aa3.63□□□□□ -1.83
HDAC7-221ENST00000477203 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
HDAC7-221ENST00000477203 MT3P25713 68 aa3.53□□□□□ -1.84
HDAC7-221ENST00000477203 HMCN1Q96RW7 5635 aa3.51□□□□□ -1.85
HDAC7-221ENST00000477203 KRTAP20-1Q3LI63 56 aa3.5□□□□□ -1.85
HDAC7-221ENST00000477203 KRTAP5-4Q6L8H1 288 aa3.49□□□□□ -1.85
HDAC7-221ENST00000477203 KRTAP2-2Q9BYT5 123 aa3.47□□□□□ -1.85
HDAC7-221ENST00000477203 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
HDAC7-221ENST00000477203 LCE1DQ5T752 114 aa3.43□□□□□ -1.86
HDAC7-221ENST00000477203 KRTAP20-2Q3LI61 65 aa3.4□□□□□ -1.86
HDAC7-221ENST00000477203 LCE4AQ5TA78 99 aa3.36□□□□□ -1.87
HDAC7-221ENST00000477203 KRTAP5-2Q701N4 177 aa3.2□□□□□ -1.9
HDAC7-221ENST00000477203 KRTAP5-3Q6L8H2 238 aa3.19□□□□□ -1.9
HDAC7-221ENST00000477203 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
HDAC7-221ENST00000477203 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
HDAC7-221ENST00000477203 MUC5ACP98088 5654 aa3.05□□□□□ -1.92
HDAC7-221ENST00000477203 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
HDAC7-221ENST00000477203 KRTAP4-11Q9BYQ6 195 aa2.91□□□□□ -1.94
HDAC7-221ENST00000477203 AHNAK2Q8IVF2 5795 aa2.88□□□□□ -1.95
HDAC7-221ENST00000477203 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
HDAC7-221ENST00000477203 KRTAP4-2Q9BYR5 136 aa2.8□□□□□ -1.96
HDAC7-221ENST00000477203 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
HDAC7-221ENST00000477203 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.97
HDAC7-221ENST00000477203 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
HDAC7-221ENST00000477203 KRTAP5-10Q6L8G5 202 aa2.7□□□□□ -1.98
HDAC7-221ENST00000477203 GPR98Q8WXG9 6306 aa2.69□□□□□ -1.98
HDAC7-221ENST00000477203 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
HDAC7-221ENST00000477203 KRTAP4-12Q9BQ66 201 aa2.57□□□□□ -2
HDAC7-221ENST00000477203 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
HDAC7-221ENST00000477203 KRTAP5-7Q6L8G8 165 aa2.49□□□□□ -2.01
HDAC7-221ENST00000477203 KRTAP9-9Q9BYP9 154 aa2.46□□□□□ -2.01
HDAC7-221ENST00000477203 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
HDAC7-221ENST00000477203 KRTAP5-11Q6L8G4 156 aa2.34□□□□□ -2.04
HDAC7-221ENST00000477203 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
HDAC7-221ENST00000477203 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
HDAC7-221ENST00000477203 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
HDAC7-221ENST00000477203 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 245 ms