RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 MT1GP13640 62 aa4.86□□□□□ -1.63
ACTN4-205ENST00000477174 LCE3AQ5TA76 89 aa4.86□□□□□ -1.63
ACTN4-205ENST00000477174 K7ERS5 55 aa4.84□□□□□ -1.63
ACTN4-205ENST00000477174 PP632Q6XCG6 107 aa4.81□□□□□ -1.64
ACTN4-205ENST00000477174 RPS28P62857 69 aaKnown RBP4.79□□□□□ -1.64
ACTN4-205ENST00000477174 MT1LQ93083 61 aa4.78□□□□□ -1.64
ACTN4-205ENST00000477174 KRTAP25-1Q3LHN0 102 aa4.76□□□□□ -1.65
ACTN4-205ENST00000477174 A6NED7 52 aa4.73□□□□□ -1.65
ACTN4-205ENST00000477174 MT1MQ8N339 61 aa4.73□□□□□ -1.65
ACTN4-205ENST00000477174 KRTAP12-3P60328 96 aa4.71□□□□□ -1.66
ACTN4-205ENST00000477174 KRTAP23-1A1A580 65 aa4.62□□□□□ -1.67
ACTN4-205ENST00000477174 KRTAP4-3Q9BYR4 195 aa4.6□□□□□ -1.67
ACTN4-205ENST00000477174 CDC42SE1Q9NRR8 79 aa4.58□□□□□ -1.68
ACTN4-205ENST00000477174 KRTAP4-9Q9BYQ8 210 aa4.55□□□□□ -1.68
ACTN4-205ENST00000477174 KRTAP19-4Q3LI73 84 aa4.54□□□□□ -1.68
ACTN4-205ENST00000477174 LCE4AQ5TA78 99 aa4.54□□□□□ -1.68
ACTN4-205ENST00000477174 KRTAP4-7Q9BYR0 210 aa4.53□□□□□ -1.68
ACTN4-205ENST00000477174 ROMO1P60602 79 aa4.51□□□□□ -1.69
ACTN4-205ENST00000477174 LCE1DQ5T752 114 aa4.47□□□□□ -1.69
ACTN4-205ENST00000477174 KRTAP15-1Q3LI76 137 aa4.46□□□□□ -1.7
ACTN4-205ENST00000477174 KRTAP5-4Q6L8H1 288 aa4.46□□□□□ -1.7
ACTN4-205ENST00000477174 HMCN1Q96RW7 5635 aa4.45□□□□□ -1.7
ACTN4-205ENST00000477174 MT4P47944 62 aa4.43□□□□□ -1.7
ACTN4-205ENST00000477174 AHNAK2Q8IVF2 5795 aa4.38□□□□□ -1.71
ACTN4-205ENST00000477174 LCE3CQ5T5A8 94 aa4.36□□□□□ -1.71
ACTN4-205ENST00000477174 KRTAP5-5Q701N2 237 aaPredicted RBP4.34□□□□□ -1.71
ACTN4-205ENST00000477174 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
ACTN4-205ENST00000477174 LOC100996750A0A140TA64 210 aa4.29□□□□□ -1.72
ACTN4-205ENST00000477174 KRTAP12-4P60329 112 aa4.23□□□□□ -1.73
ACTN4-205ENST00000477174 SPRR5A0A1B0GTR4 108 aa4.22□□□□□ -1.73
ACTN4-205ENST00000477174 KRTAP5-10Q6L8G5 202 aa4.21□□□□□ -1.74
ACTN4-205ENST00000477174 KRTAP20-2Q3LI61 65 aa4.19□□□□□ -1.74
ACTN4-205ENST00000477174 BRK1Q8WUW1 75 aa4.18□□□□□ -1.74
ACTN4-205ENST00000477174 SYNE1Q8NF91 8797 aaKnown RBP4.16□□□□□ -1.74
ACTN4-205ENST00000477174 KRTAP5-7Q6L8G8 165 aa4.16□□□□□ -1.74
ACTN4-205ENST00000477174 KRTAP9-6A8MVA2 160 aa4.08□□□□□ -1.76
ACTN4-205ENST00000477174 MT1AP04731 61 aa4.08□□□□□ -1.76
ACTN4-205ENST00000477174 PRO0628Q9UI54 55 aa4.08□□□□□ -1.76
ACTN4-205ENST00000477174 KRTAP5-3Q6L8H2 238 aa4.07□□□□□ -1.76
ACTN4-205ENST00000477174 KRTAP6-1Q3LI64 71 aa4.03□□□□□ -1.76
ACTN4-205ENST00000477174 PMAIP1Q13794 54 aa3.95□□□□□ -1.78
ACTN4-205ENST00000477174 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
ACTN4-205ENST00000477174 AHNAKQ09666 5890 aaKnown RBP3.94□□□□□ -1.78
ACTN4-205ENST00000477174 KRTAP5-2Q701N4 177 aa3.93□□□□□ -1.78
ACTN4-205ENST00000477174 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.79
ACTN4-205ENST00000477174 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
ACTN4-205ENST00000477174 KTN1-AS1Q86SY8 53 aa3.78□□□□□ -1.8
ACTN4-205ENST00000477174 MUC5ACP98088 5654 aa3.75□□□□□ -1.81
ACTN4-205ENST00000477174 MT3P25713 68 aa3.75□□□□□ -1.81
ACTN4-205ENST00000477174 MUC5BQ9HC84 5762 aaPredicted RBP3.75□□□□□ -1.81
ACTN4-205ENST00000477174 PRAC1Q96KF2 57 aa3.72□□□□□ -1.81
ACTN4-205ENST00000477174 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
ACTN4-205ENST00000477174 KRTAP5-8O75690 187 aa3.67□□□□□ -1.82
ACTN4-205ENST00000477174 SVIPQ8NHG7 77 aa3.65□□□□□ -1.83
ACTN4-205ENST00000477174 KRTAP5-1Q6L8H4 278 aa3.5□□□□□ -1.85
ACTN4-205ENST00000477174 KRTAP9-9Q9BYP9 154 aa3.48□□□□□ -1.85
ACTN4-205ENST00000477174 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
ACTN4-205ENST00000477174 LUZP6Q538Z0 58 aa3.2□□□□□ -1.9
ACTN4-205ENST00000477174 KRTAP4-2Q9BYR5 136 aa3.19□□□□□ -1.9
ACTN4-205ENST00000477174 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
ACTN4-205ENST00000477174 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
ACTN4-205ENST00000477174 LCE3DQ9BYE3 92 aa3.17□□□□□ -1.9
ACTN4-205ENST00000477174 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
ACTN4-205ENST00000477174 NDUFAF8A1L188 74 aa2.93□□□□□ -1.94
ACTN4-205ENST00000477174 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.95
ACTN4-205ENST00000477174 KRTAP5-11Q6L8G4 156 aa2.85□□□□□ -1.95
ACTN4-205ENST00000477174 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
ACTN4-205ENST00000477174 LCE1FQ5T754 118 aa2.77□□□□□ -1.97
ACTN4-205ENST00000477174 KRTAP21-2Q3LI59 83 aa2.67□□□□□ -1.98
ACTN4-205ENST00000477174 A0A0A0MQY5 61 aa2.62□□□□□ -1.99
ACTN4-205ENST00000477174 H3BS24 57 aa2.53□□□□□ -2
ACTN4-205ENST00000477174 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
ACTN4-205ENST00000477174 INE1O15225 51 aa2.44□□□□□ -2.02
ACTN4-205ENST00000477174 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
ACTN4-205ENST00000477174 PRM1P04553 51 aa2.29□□□□□ -2.04
ACTN4-205ENST00000477174 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
ACTN4-205ENST00000477174 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
ACTN4-205ENST00000477174 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 11.7 ms