RNA–Protein interactions for RNA: ENST00000477002.1

CNTNAP3-209, Transcript of contactin associated protein like 3, humanhuman

TSL 5

Gene CNTNAP3, Length 291 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-209ENST00000477002 CCDC179H3BU77 68 aa6.54□□□□□ -1.36
CNTNAP3-209ENST00000477002 ATP5EP56381 51 aaPredicted RBP6.52□□□□□ -1.37
CNTNAP3-209ENST00000477002 PRR15LQ9BU68 103 aa6.52□□□□□ -1.37
CNTNAP3-209ENST00000477002 PP632Q6XCG6 107 aa6.5□□□□□ -1.37
CNTNAP3-209ENST00000477002 TNP1P09430 55 aa6.48□□□□□ -1.37
CNTNAP3-209ENST00000477002 C10orf95Q9H7T3 257 aa6.47□□□□□ -1.37
CNTNAP3-209ENST00000477002 LCE3AQ5TA76 89 aa6.43□□□□□ -1.38
CNTNAP3-209ENST00000477002 MT1LQ93083 61 aa6.43□□□□□ -1.38
CNTNAP3-209ENST00000477002 LINC01558Q9Y6Z2 57 aa6.42□□□□□ -1.38
CNTNAP3-209ENST00000477002 MT1MQ8N339 61 aa6.41□□□□□ -1.38
CNTNAP3-209ENST00000477002 TMEM258P61165 79 aa6.31□□□□□ -1.4
CNTNAP3-209ENST00000477002 UQCR11O14957 56 aa6.29□□□□□ -1.4
CNTNAP3-209ENST00000477002 GPR98Q8WXG9 6306 aa6.25□□□□□ -1.41
CNTNAP3-209ENST00000477002 KRTAP4-3Q9BYR4 195 aa6.25□□□□□ -1.41
CNTNAP3-209ENST00000477002 MT4P47944 62 aa6.2□□□□□ -1.42
CNTNAP3-209ENST00000477002 KRTAP12-3P60328 96 aa6.2□□□□□ -1.42
CNTNAP3-209ENST00000477002 KRTAP5-4Q6L8H1 288 aa6.15□□□□□ -1.42
CNTNAP3-209ENST00000477002 HMCN1Q96RW7 5635 aa6.14□□□□□ -1.43
CNTNAP3-209ENST00000477002 MIR22HGQ0VDD5 57 aa6.13□□□□□ -1.43
CNTNAP3-209ENST00000477002 KRTAP25-1Q3LHN0 102 aa6.09□□□□□ -1.43
CNTNAP3-209ENST00000477002 K7ERS5 55 aa6.06□□□□□ -1.44
CNTNAP3-209ENST00000477002 KRTAP23-1A1A580 65 aa6.02□□□□□ -1.45
CNTNAP3-209ENST00000477002 V9GYY9 64 aa6.01□□□□□ -1.45
CNTNAP3-209ENST00000477002 PSPHP1O15172 72 aa5.97□□□□□ -1.45
CNTNAP3-209ENST00000477002 Q1T7F1 81 aa5.95□□□□□ -1.46
CNTNAP3-209ENST00000477002 AHNAK2Q8IVF2 5795 aa5.91□□□□□ -1.46
CNTNAP3-209ENST00000477002 KRTAP5-3Q6L8H2 238 aa5.9□□□□□ -1.46
CNTNAP3-209ENST00000477002 KRTAP5-5Q701N2 237 aaPredicted RBP5.89□□□□□ -1.47
CNTNAP3-209ENST00000477002 PCP4P48539 62 aa5.86□□□□□ -1.47
CNTNAP3-209ENST00000477002 KRTAP5-10Q6L8G5 202 aa5.85□□□□□ -1.47
CNTNAP3-209ENST00000477002 KRTAP15-1Q3LI76 137 aa5.83□□□□□ -1.48
CNTNAP3-209ENST00000477002 KRTAP20-2Q3LI61 65 aa5.8□□□□□ -1.48
CNTNAP3-209ENST00000477002 SPRR5A0A1B0GTR4 108 aa5.79□□□□□ -1.48
CNTNAP3-209ENST00000477002 A6NED7 52 aa5.78□□□□□ -1.48
CNTNAP3-209ENST00000477002 KRTAP12-4P60329 112 aa5.77□□□□□ -1.49
CNTNAP3-209ENST00000477002 LCE3CQ5T5A8 94 aa5.71□□□□□ -1.5
CNTNAP3-209ENST00000477002 CDC42SE1Q9NRR8 79 aa5.71□□□□□ -1.5
CNTNAP3-209ENST00000477002 KRTAP5-7Q6L8G8 165 aa5.64□□□□□ -1.51
CNTNAP3-209ENST00000477002 ROMO1P60602 79 aa5.61□□□□□ -1.51
CNTNAP3-209ENST00000477002 RPS28P62857 69 aaKnown RBP5.58□□□□□ -1.52
CNTNAP3-209ENST00000477002 SYNE1Q8NF91 8797 aaKnown RBP5.58□□□□□ -1.52
CNTNAP3-209ENST00000477002 MT1AP04731 61 aa5.47□□□□□ -1.53
CNTNAP3-209ENST00000477002 KRTAP6-1Q3LI64 71 aa5.43□□□□□ -1.54
CNTNAP3-209ENST00000477002 KRTAP5-2Q701N4 177 aa5.38□□□□□ -1.55
CNTNAP3-209ENST00000477002 KRTAP9-6A8MVA2 160 aa5.36□□□□□ -1.55
CNTNAP3-209ENST00000477002 KRTAP6-2Q3LI66 62 aa5.21□□□□□ -1.58
CNTNAP3-209ENST00000477002 KRTAP5-8O75690 187 aa5.13□□□□□ -1.59
CNTNAP3-209ENST00000477002 OBSCNQ5VST9 7968 aa5.02□□□□□ -1.61
CNTNAP3-209ENST00000477002 MT3P25713 68 aa5.02□□□□□ -1.61
CNTNAP3-209ENST00000477002 MUC5ACP98088 5654 aa4.9□□□□□ -1.63
CNTNAP3-209ENST00000477002 MUC5BQ9HC84 5762 aaPredicted RBP4.88□□□□□ -1.63
CNTNAP3-209ENST00000477002 AHNAKQ09666 5890 aaKnown RBP4.87□□□□□ -1.63
CNTNAP3-209ENST00000477002 BRK1Q8WUW1 75 aa4.86□□□□□ -1.63
CNTNAP3-209ENST00000477002 KRTAP5-1Q6L8H4 278 aa4.82□□□□□ -1.64
CNTNAP3-209ENST00000477002 PRO0628Q9UI54 55 aa4.67□□□□□ -1.66
CNTNAP3-209ENST00000477002 LCE1EQ5T753 118 aa4.63□□□□□ -1.67
CNTNAP3-209ENST00000477002 PMAIP1Q13794 54 aa4.59□□□□□ -1.67
CNTNAP3-209ENST00000477002 KRTAP5-11Q6L8G4 156 aa4.53□□□□□ -1.68
CNTNAP3-209ENST00000477002 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.5□□□□□ -1.69
CNTNAP3-209ENST00000477002 PRAC1Q96KF2 57 aa4.4□□□□□ -1.71
CNTNAP3-209ENST00000477002 KTN1-AS1Q86SY8 53 aa4.36□□□□□ -1.71
CNTNAP3-209ENST00000477002 LCE1BQ5T7P3 118 aa4.34□□□□□ -1.71
CNTNAP3-209ENST00000477002 LCE1CQ5T751 118 aa4.3□□□□□ -1.72
CNTNAP3-209ENST00000477002 A0A0A0MQY5 61 aa4.23□□□□□ -1.73
CNTNAP3-209ENST00000477002 SVIPQ8NHG7 77 aa4.15□□□□□ -1.75
CNTNAP3-209ENST00000477002 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
CNTNAP3-209ENST00000477002 LCE1FQ5T754 118 aa4□□□□□ -1.77
CNTNAP3-209ENST00000477002 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
CNTNAP3-209ENST00000477002 LUZP6Q538Z0 58 aa3.79□□□□□ -1.8
CNTNAP3-209ENST00000477002 KRTAP4-4Q9BYR3 166 aa3.72□□□□□ -1.81
CNTNAP3-209ENST00000477002 NDUFAF8A1L188 74 aa3.62□□□□□ -1.83
CNTNAP3-209ENST00000477002 KRTAP21-2Q3LI59 83 aa3.59□□□□□ -1.83
CNTNAP3-209ENST00000477002 PHGR1C9JFL3 82 aa3.41□□□□□ -1.86
CNTNAP3-209ENST00000477002 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
CNTNAP3-209ENST00000477002 PRM1P04553 51 aa2.85□□□□□ -1.95
CNTNAP3-209ENST00000477002 INE1O15225 51 aa2.77□□□□□ -1.97
CNTNAP3-209ENST00000477002 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
CNTNAP3-209ENST00000477002 MUC16Q8WXI7 14507 aa2.18□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 51.1 ms