RNA–Protein interactions for RNA: ENST00000476930.1

PTPRN-213, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-213ENST00000476930 KRTAP19-3Q7Z4W3 81 aa4.12□□□□□ -1.75
PTPRN-213ENST00000476930 KRTAP19-5Q3LI72 72 aa4.09□□□□□ -1.75
PTPRN-213ENST00000476930 A0A1B0GU69 56 aa4.08□□□□□ -1.76
PTPRN-213ENST00000476930 A8MU10 97 aa4.07□□□□□ -1.76
PTPRN-213ENST00000476930 ANAPC13Q9BS18 74 aa4.06□□□□□ -1.76
PTPRN-213ENST00000476930 SMIM26A0A096LP01 95 aa4.04□□□□□ -1.76
PTPRN-213ENST00000476930 NDUFAF8A1L188 74 aa4.04□□□□□ -1.76
PTPRN-213ENST00000476930 MT1GP13640 62 aa4.02□□□□□ -1.77
PTPRN-213ENST00000476930 GPR98Q8WXG9 6306 aa4.02□□□□□ -1.77
PTPRN-213ENST00000476930 CCDC179H3BU77 68 aa4.01□□□□□ -1.77
PTPRN-213ENST00000476930 C10orf95Q9H7T3 257 aa3.99□□□□□ -1.77
PTPRN-213ENST00000476930 LCE3AQ5TA76 89 aa3.98□□□□□ -1.77
PTPRN-213ENST00000476930 MT1MQ8N339 61 aa3.97□□□□□ -1.77
PTPRN-213ENST00000476930 MT1LQ93083 61 aa3.97□□□□□ -1.77
PTPRN-213ENST00000476930 PP632Q6XCG6 107 aa3.96□□□□□ -1.78
PTPRN-213ENST00000476930 TNP1P09430 55 aa3.94□□□□□ -1.78
PTPRN-213ENST00000476930 PRR15LQ9BU68 103 aa3.92□□□□□ -1.78
PTPRN-213ENST00000476930 HMCN1Q96RW7 5635 aa3.91□□□□□ -1.78
PTPRN-213ENST00000476930 ATP5EP56381 51 aaPredicted RBP3.91□□□□□ -1.78
PTPRN-213ENST00000476930 KRTAP4-3Q9BYR4 195 aa3.91□□□□□ -1.78
PTPRN-213ENST00000476930 LINC01558Q9Y6Z2 57 aa3.9□□□□□ -1.79
PTPRN-213ENST00000476930 PSPHP1O15172 72 aa3.89□□□□□ -1.79
PTPRN-213ENST00000476930 MT4P47944 62 aa3.86□□□□□ -1.79
PTPRN-213ENST00000476930 TMEM258P61165 79 aa3.86□□□□□ -1.79
PTPRN-213ENST00000476930 PRO0628Q9UI54 55 aa3.85□□□□□ -1.79
PTPRN-213ENST00000476930 AHNAK2Q8IVF2 5795 aa3.82□□□□□ -1.8
PTPRN-213ENST00000476930 MT3P25713 68 aa3.82□□□□□ -1.8
PTPRN-213ENST00000476930 UQCR11O14957 56 aa3.8□□□□□ -1.8
PTPRN-213ENST00000476930 KRTAP12-3P60328 96 aa3.8□□□□□ -1.8
PTPRN-213ENST00000476930 RPS28P62857 69 aaKnown RBP3.8□□□□□ -1.8
PTPRN-213ENST00000476930 KRTAP5-4Q6L8H1 288 aa3.8□□□□□ -1.8
PTPRN-213ENST00000476930 MIR22HGQ0VDD5 57 aa3.72□□□□□ -1.81
PTPRN-213ENST00000476930 KRTAP25-1Q3LHN0 102 aa3.69□□□□□ -1.82
PTPRN-213ENST00000476930 KRTAP5-10Q6L8G5 202 aa3.64□□□□□ -1.83
PTPRN-213ENST00000476930 KRTAP5-5Q701N2 237 aaPredicted RBP3.64□□□□□ -1.83
PTPRN-213ENST00000476930 KRTAP5-3Q6L8H2 238 aa3.63□□□□□ -1.83
PTPRN-213ENST00000476930 SYNE1Q8NF91 8797 aaKnown RBP3.63□□□□□ -1.83
PTPRN-213ENST00000476930 K7ERS5 55 aa3.62□□□□□ -1.83
PTPRN-213ENST00000476930 Q1T7F1 81 aa3.6□□□□□ -1.83
PTPRN-213ENST00000476930 KRTAP20-2Q3LI61 65 aa3.59□□□□□ -1.83
PTPRN-213ENST00000476930 LUZP6Q538Z0 58 aa3.59□□□□□ -1.83
PTPRN-213ENST00000476930 PMAIP1Q13794 54 aa3.56□□□□□ -1.84
PTPRN-213ENST00000476930 SPRR5A0A1B0GTR4 108 aa3.55□□□□□ -1.84
PTPRN-213ENST00000476930 KRTAP12-4P60329 112 aa3.53□□□□□ -1.84
PTPRN-213ENST00000476930 LCE3CQ5T5A8 94 aa3.5□□□□□ -1.85
PTPRN-213ENST00000476930 A6NED7 52 aa3.49□□□□□ -1.85
PTPRN-213ENST00000476930 KRTAP5-7Q6L8G8 165 aa3.49□□□□□ -1.85
PTPRN-213ENST00000476930 CDC42SE1Q9NRR8 79 aa3.45□□□□□ -1.86
PTPRN-213ENST00000476930 ROMO1P60602 79 aa3.4□□□□□ -1.87
PTPRN-213ENST00000476930 KRTAP6-1Q3LI64 71 aa3.38□□□□□ -1.87
PTPRN-213ENST00000476930 MT1AP04731 61 aa3.37□□□□□ -1.87
PTPRN-213ENST00000476930 BRK1Q8WUW1 75 aa3.35□□□□□ -1.87
PTPRN-213ENST00000476930 KRTAP9-6A8MVA2 160 aa3.34□□□□□ -1.87
PTPRN-213ENST00000476930 KRTAP5-2Q701N4 177 aa3.33□□□□□ -1.88
PTPRN-213ENST00000476930 KTN1-AS1Q86SY8 53 aa3.32□□□□□ -1.88
PTPRN-213ENST00000476930 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
PTPRN-213ENST00000476930 OBSCNQ5VST9 7968 aa3.24□□□□□ -1.89
PTPRN-213ENST00000476930 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
PTPRN-213ENST00000476930 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
PTPRN-213ENST00000476930 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
PTPRN-213ENST00000476930 AHNAKQ09666 5890 aaKnown RBP3.14□□□□□ -1.91
PTPRN-213ENST00000476930 MUC5BQ9HC84 5762 aaPredicted RBP3.13□□□□□ -1.91
PTPRN-213ENST00000476930 MUC5ACP98088 5654 aa3.09□□□□□ -1.91
PTPRN-213ENST00000476930 KRTAP5-1Q6L8H4 278 aa2.99□□□□□ -1.93
PTPRN-213ENST00000476930 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
PTPRN-213ENST00000476930 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
PTPRN-213ENST00000476930 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.74□□□□□ -1.97
PTPRN-213ENST00000476930 LCE1BQ5T7P3 118 aa2.69□□□□□ -1.98
PTPRN-213ENST00000476930 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
PTPRN-213ENST00000476930 LCE3DQ9BYE3 92 aa2.51□□□□□ -2.01
PTPRN-213ENST00000476930 INE1O15225 51 aa2.43□□□□□ -2.02
PTPRN-213ENST00000476930 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
PTPRN-213ENST00000476930 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
PTPRN-213ENST00000476930 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
PTPRN-213ENST00000476930 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
PTPRN-213ENST00000476930 PRM1P04553 51 aa1.76□□□□□ -2.13
PTPRN-213ENST00000476930 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
PTPRN-213ENST00000476930 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 62.1 ms