RNA–Protein interactions for RNA: ENST00000476862.1

ABCB1-204, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 3

Gene ABCB1, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-204ENST00000476862 LCE4AQ5TA78 99 aa6.32□□□□□ -1.4
ABCB1-204ENST00000476862 UQCR11O14957 56 aa6.31□□□□□ -1.4
ABCB1-204ENST00000476862 GPR98Q8WXG9 6306 aa6.29□□□□□ -1.4
ABCB1-204ENST00000476862 LCE1DQ5T752 114 aa6.29□□□□□ -1.4
ABCB1-204ENST00000476862 MT4P47944 62 aa6.26□□□□□ -1.41
ABCB1-204ENST00000476862 TMEM258P61165 79 aa6.26□□□□□ -1.41
ABCB1-204ENST00000476862 KRTAP4-3Q9BYR4 195 aa6.21□□□□□ -1.42
ABCB1-204ENST00000476862 KRTAP12-3P60328 96 aa6.19□□□□□ -1.42
ABCB1-204ENST00000476862 K7ERS5 55 aa6.16□□□□□ -1.42
ABCB1-204ENST00000476862 MIR22HGQ0VDD5 57 aa6.14□□□□□ -1.43
ABCB1-204ENST00000476862 HMCN1Q96RW7 5635 aa6.1□□□□□ -1.43
ABCB1-204ENST00000476862 KRTAP25-1Q3LHN0 102 aa6.09□□□□□ -1.43
ABCB1-204ENST00000476862 KRTAP5-4Q6L8H1 288 aa6.09□□□□□ -1.43
ABCB1-204ENST00000476862 KRTAP4-7Q9BYR0 210 aa6.05□□□□□ -1.44
ABCB1-204ENST00000476862 H3BS24 57 aa6.04□□□□□ -1.44
ABCB1-204ENST00000476862 V9GYY9 64 aa6.03□□□□□ -1.44
ABCB1-204ENST00000476862 PSPHP1O15172 72 aa5.96□□□□□ -1.46
ABCB1-204ENST00000476862 AHNAK2Q8IVF2 5795 aa5.95□□□□□ -1.46
ABCB1-204ENST00000476862 Q1T7F1 81 aa5.88□□□□□ -1.47
ABCB1-204ENST00000476862 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
ABCB1-204ENST00000476862 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
ABCB1-204ENST00000476862 KRTAP12-4P60329 112 aa5.83□□□□□ -1.48
ABCB1-204ENST00000476862 KRTAP5-10Q6L8G5 202 aa5.83□□□□□ -1.48
ABCB1-204ENST00000476862 A6NED7 52 aa5.8□□□□□ -1.48
ABCB1-204ENST00000476862 KRTAP5-5Q701N2 237 aaPredicted RBP5.8□□□□□ -1.48
ABCB1-204ENST00000476862 KRTAP20-2Q3LI61 65 aa5.79□□□□□ -1.48
ABCB1-204ENST00000476862 SPRR5A0A1B0GTR4 108 aa5.78□□□□□ -1.48
ABCB1-204ENST00000476862 KRTAP15-1Q3LI76 137 aa5.77□□□□□ -1.49
ABCB1-204ENST00000476862 KRTAP4-12Q9BQ66 201 aa5.76□□□□□ -1.49
ABCB1-204ENST00000476862 CDC42SE1Q9NRR8 79 aa5.74□□□□□ -1.49
ABCB1-204ENST00000476862 KRTAP5-3Q6L8H2 238 aa5.73□□□□□ -1.49
ABCB1-204ENST00000476862 LCE3CQ5T5A8 94 aa5.69□□□□□ -1.5
ABCB1-204ENST00000476862 KRTAP5-7Q6L8G8 165 aa5.64□□□□□ -1.51
ABCB1-204ENST00000476862 KRTAP9-9Q9BYP9 154 aa5.64□□□□□ -1.51
ABCB1-204ENST00000476862 KRTAP9-4Q9BYQ2 154 aa5.64□□□□□ -1.51
ABCB1-204ENST00000476862 RPS28P62857 69 aaKnown RBP5.63□□□□□ -1.51
ABCB1-204ENST00000476862 ROMO1P60602 79 aa5.61□□□□□ -1.51
ABCB1-204ENST00000476862 SYNE1Q8NF91 8797 aaKnown RBP5.58□□□□□ -1.52
ABCB1-204ENST00000476862 MT1AP04731 61 aa5.45□□□□□ -1.54
ABCB1-204ENST00000476862 KRTAP6-1Q3LI64 71 aa5.4□□□□□ -1.54
ABCB1-204ENST00000476862 KRTAP4-11Q9BYQ6 195 aa5.32□□□□□ -1.56
ABCB1-204ENST00000476862 KRTAP5-2Q701N4 177 aa5.31□□□□□ -1.56
ABCB1-204ENST00000476862 PCP4P48539 62 aa5.28□□□□□ -1.56
ABCB1-204ENST00000476862 KRTAP9-6A8MVA2 160 aa5.25□□□□□ -1.57
ABCB1-204ENST00000476862 KRTAP6-2Q3LI66 62 aa5.19□□□□□ -1.58
ABCB1-204ENST00000476862 KRTAP4-2Q9BYR5 136 aa5.18□□□□□ -1.58
ABCB1-204ENST00000476862 KRTAP5-8O75690 187 aa5.1□□□□□ -1.59
ABCB1-204ENST00000476862 MT3P25713 68 aa5.05□□□□□ -1.6
ABCB1-204ENST00000476862 OBSCNQ5VST9 7968 aa5.03□□□□□ -1.6
ABCB1-204ENST00000476862 AHNAKQ09666 5890 aaKnown RBP4.9□□□□□ -1.62
ABCB1-204ENST00000476862 MUC5BQ9HC84 5762 aaPredicted RBP4.87□□□□□ -1.63
ABCB1-204ENST00000476862 MUC5ACP98088 5654 aa4.86□□□□□ -1.63
ABCB1-204ENST00000476862 BRK1Q8WUW1 75 aa4.85□□□□□ -1.63
ABCB1-204ENST00000476862 KRTAP5-1Q6L8H4 278 aa4.78□□□□□ -1.64
ABCB1-204ENST00000476862 LCE1EQ5T753 118 aa4.61□□□□□ -1.67
ABCB1-204ENST00000476862 PMAIP1Q13794 54 aa4.57□□□□□ -1.68
ABCB1-204ENST00000476862 LCE1BQ5T7P3 118 aa4.4□□□□□ -1.71
ABCB1-204ENST00000476862 PRAC1Q96KF2 57 aa4.35□□□□□ -1.71
ABCB1-204ENST00000476862 LCE1CQ5T751 118 aa4.26□□□□□ -1.73
ABCB1-204ENST00000476862 SVIPQ8NHG7 77 aa4.19□□□□□ -1.74
ABCB1-204ENST00000476862 LCE3DQ9BYE3 92 aa4.12□□□□□ -1.75
ABCB1-204ENST00000476862 PRO0628Q9UI54 55 aa4.05□□□□□ -1.76
ABCB1-204ENST00000476862 KTN1-AS1Q86SY8 53 aa3.93□□□□□ -1.78
ABCB1-204ENST00000476862 A0A0A0MQY5 61 aa3.9□□□□□ -1.79
ABCB1-204ENST00000476862 LUZP6Q538Z0 58 aa3.87□□□□□ -1.79
ABCB1-204ENST00000476862 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
ABCB1-204ENST00000476862 KRTAP5-11Q6L8G4 156 aa3.86□□□□□ -1.79
ABCB1-204ENST00000476862 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
ABCB1-204ENST00000476862 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
ABCB1-204ENST00000476862 KRTAP21-2Q3LI59 83 aa3.52□□□□□ -1.85
ABCB1-204ENST00000476862 PHGR1C9JFL3 82 aa3.47□□□□□ -1.85
ABCB1-204ENST00000476862 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
ABCB1-204ENST00000476862 NDUFAF8A1L188 74 aa3.14□□□□□ -1.91
ABCB1-204ENST00000476862 MUC19Q7Z5P9 8384 aa3.1□□□□□ -1.91
ABCB1-204ENST00000476862 PRM1P04553 51 aa2.84□□□□□ -1.95
ABCB1-204ENST00000476862 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.99
ABCB1-204ENST00000476862 INE1O15225 51 aa2.29□□□□□ -2.04
ABCB1-204ENST00000476862 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 8.1 ms