RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 KRTAP19-3Q7Z4W3 81 aa10.14□□□□□ -0.79
VEGFA-211ENST00000476772 LCE3CQ5T5A8 94 aa10.05□□□□□ -0.8
VEGFA-211ENST00000476772 KRTAP9-7A8MTY7 169 aa10.02□□□□□ -0.81
VEGFA-211ENST00000476772 KRTAP19-4Q3LI73 84 aa10.02□□□□□ -0.81
VEGFA-211ENST00000476772 MT1GP13640 62 aa10.01□□□□□ -0.81
VEGFA-211ENST00000476772 LCE1AQ5T7P2 110 aa10□□□□□ -0.81
VEGFA-211ENST00000476772 MDN1Q9NU22 5596 aa10□□□□□ -0.81
VEGFA-211ENST00000476772 LCE5AQ5TCM9 118 aa9.98□□□□□ -0.81
VEGFA-211ENST00000476772 KRTAP4-7Q9BYR0 210 aa9.97□□□□□ -0.81
VEGFA-211ENST00000476772 SPRR2EP22531 72 aa9.95□□□□□ -0.82
VEGFA-211ENST00000476772 SPRR2BP35325 72 aa9.95□□□□□ -0.82
VEGFA-211ENST00000476772 SPRR2AP35326 72 aa9.95□□□□□ -0.82
VEGFA-211ENST00000476772 MT1MQ8N339 61 aa9.92□□□□□ -0.82
VEGFA-211ENST00000476772 SPRR5A0A1B0GTR4 108 aa9.87□□□□□ -0.83
VEGFA-211ENST00000476772 KRTAP4-3Q9BYR4 195 aa9.75□□□□□ -0.85
VEGFA-211ENST00000476772 SPRR2DP22532 72 aa9.58□□□□□ -0.88
VEGFA-211ENST00000476772 NEBP20929 6669 aa9.55□□□□□ -0.88
VEGFA-211ENST00000476772 KRTAP9-6A8MVA2 160 aa9.54□□□□□ -0.88
VEGFA-211ENST00000476772 LUZP6Q538Z0 58 aa9.42□□□□□ -0.9
VEGFA-211ENST00000476772 DSTQ03001 7570 aaKnown RBP9.42□□□□□ -0.9
VEGFA-211ENST00000476772 LOC100996750A0A140TA64 210 aa9.38□□□□□ -0.91
VEGFA-211ENST00000476772 LCE3BQ5TA77 95 aa9.22□□□□□ -0.93
VEGFA-211ENST00000476772 NDUFAF8A1L188 74 aa9.13□□□□□ -0.95
VEGFA-211ENST00000476772 KRTAP2-3P0C7H8 128 aa8.97□□□□□ -0.97
VEGFA-211ENST00000476772 KRTAP2-4Q9BYR9 128 aa8.97□□□□□ -0.97
VEGFA-211ENST00000476772 KRTAP5-5Q701N2 237 aaPredicted RBP8.96□□□□□ -0.98
VEGFA-211ENST00000476772 KRTAP20-1Q3LI63 56 aa8.88□□□□□ -0.99
VEGFA-211ENST00000476772 H3BS24 57 aa8.8□□□□□ -1
VEGFA-211ENST00000476772 KRTAP2-2Q9BYT5 123 aa8.78□□□□□ -1
VEGFA-211ENST00000476772 KRTAP2-1Q9BYU5 128 aa8.78□□□□□ -1
VEGFA-211ENST00000476772 MT1AP04731 61 aa8.73□□□□□ -1.01
VEGFA-211ENST00000476772 KRTAP6-1Q3LI64 71 aa8.68□□□□□ -1.02
VEGFA-211ENST00000476772 KRTAP5-4Q6L8H1 288 aa8.62□□□□□ -1.03
VEGFA-211ENST00000476772 KRTAP4-6Q9BYQ5 205 aa8.55□□□□□ -1.04
VEGFA-211ENST00000476772 SYNE1Q8NF91 8797 aaKnown RBP8.51□□□□□ -1.05
VEGFA-211ENST00000476772 LCE4AQ5TA78 99 aa8.48□□□□□ -1.05
VEGFA-211ENST00000476772 MT4P47944 62 aa8.34□□□□□ -1.07
VEGFA-211ENST00000476772 KRTAP12-4P60329 112 aa8.33□□□□□ -1.08
VEGFA-211ENST00000476772 KRTAP9-4Q9BYQ2 154 aa8.3□□□□□ -1.08
VEGFA-211ENST00000476772 KRTAP4-9Q9BYQ8 210 aa8.3□□□□□ -1.08
VEGFA-211ENST00000476772 LCE1DQ5T752 114 aa8.21□□□□□ -1.09
VEGFA-211ENST00000476772 KRTAP20-2Q3LI61 65 aa8.08□□□□□ -1.12
VEGFA-211ENST00000476772 HMCN1Q96RW7 5635 aa8.07□□□□□ -1.12
VEGFA-211ENST00000476772 KRTAP6-2Q3LI66 62 aa8.02□□□□□ -1.13
VEGFA-211ENST00000476772 A0A0A0MQY5 61 aa7.91□□□□□ -1.14
VEGFA-211ENST00000476772 MT3P25713 68 aa7.91□□□□□ -1.14
VEGFA-211ENST00000476772 KRTAP5-2Q701N4 177 aa7.79□□□□□ -1.16
VEGFA-211ENST00000476772 KRTAP5-3Q6L8H2 238 aa7.79□□□□□ -1.16
VEGFA-211ENST00000476772 LCE3DQ9BYE3 92 aa7.51□□□□□ -1.21
VEGFA-211ENST00000476772 INE1O15225 51 aa7.46□□□□□ -1.22
VEGFA-211ENST00000476772 LCE3EQ5T5B0 92 aa7.28□□□□□ -1.24
VEGFA-211ENST00000476772 OBSCNQ5VST9 7968 aa7.28□□□□□ -1.24
VEGFA-211ENST00000476772 AHNAK2Q8IVF2 5795 aa7.24□□□□□ -1.25
VEGFA-211ENST00000476772 KRTAP9-9Q9BYP9 154 aa7.16□□□□□ -1.26
VEGFA-211ENST00000476772 KRTAP4-12Q9BQ66 201 aa7.13□□□□□ -1.27
VEGFA-211ENST00000476772 GPR98Q8WXG9 6306 aa7.12□□□□□ -1.27
VEGFA-211ENST00000476772 KRTAP4-11Q9BYQ6 195 aa7.03□□□□□ -1.28
VEGFA-211ENST00000476772 KRTAP5-10Q6L8G5 202 aa6.9□□□□□ -1.31
VEGFA-211ENST00000476772 LCE1EQ5T753 118 aa6.89□□□□□ -1.31
VEGFA-211ENST00000476772 KRTAP5-8O75690 187 aa6.78□□□□□ -1.32
VEGFA-211ENST00000476772 KRTAP5-1Q6L8H4 278 aa6.77□□□□□ -1.33
VEGFA-211ENST00000476772 KRTAP4-2Q9BYR5 136 aa6.63□□□□□ -1.35
VEGFA-211ENST00000476772 LCE1BQ5T7P3 118 aa6.52□□□□□ -1.37
VEGFA-211ENST00000476772 MUC5ACP98088 5654 aa6.51□□□□□ -1.37
VEGFA-211ENST00000476772 KRTAP5-7Q6L8G8 165 aa6.51□□□□□ -1.37
VEGFA-211ENST00000476772 LCE1CQ5T751 118 aa6.42□□□□□ -1.38
VEGFA-211ENST00000476772 PRM1P04553 51 aa6.3□□□□□ -1.4
VEGFA-211ENST00000476772 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.99□□□□□ -1.45
VEGFA-211ENST00000476772 MUC5BQ9HC84 5762 aaPredicted RBP5.79□□□□□ -1.48
VEGFA-211ENST00000476772 KRTAP5-11Q6L8G4 156 aa5.69□□□□□ -1.5
VEGFA-211ENST00000476772 KRTAP21-2Q3LI59 83 aa5.68□□□□□ -1.5
VEGFA-211ENST00000476772 AHNAKQ09666 5890 aaKnown RBP5.48□□□□□ -1.53
VEGFA-211ENST00000476772 LCE1FQ5T754 118 aa5.15□□□□□ -1.58
VEGFA-211ENST00000476772 KRTAP4-4Q9BYR3 166 aa5.09□□□□□ -1.59
VEGFA-211ENST00000476772 PHGR1C9JFL3 82 aa4.89□□□□□ -1.63
VEGFA-211ENST00000476772 MUC19Q7Z5P9 8384 aa4.37□□□□□ -1.71
VEGFA-211ENST00000476772 KRTAP21-1Q3LI58 79 aa3.8□□□□□ -1.8
VEGFA-211ENST00000476772 MUC16Q8WXI7 14507 aa3.19□□□□□ -1.9
Retrieved 78 of 20,778 RNA–protein pairs in 5.3 ms