RNA–Protein interactions for RNA: ENST00000476640.1

HMGCS2-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 3

Gene HMGCS2, Length 857 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-203ENST00000476640 LCE4AQ5TA78 99 aa4.8□□□□□ -1.64
HMGCS2-203ENST00000476640 KTN1-AS1Q86SY8 53 aa4.76□□□□□ -1.65
HMGCS2-203ENST00000476640 MT1MQ8N339 61 aa4.76□□□□□ -1.65
HMGCS2-203ENST00000476640 MT1LQ93083 61 aa4.74□□□□□ -1.65
HMGCS2-203ENST00000476640 MT4P47944 62 aa4.73□□□□□ -1.65
HMGCS2-203ENST00000476640 A0A1B0GU69 56 aa4.71□□□□□ -1.66
HMGCS2-203ENST00000476640 H3BS24 57 aa4.7□□□□□ -1.66
HMGCS2-203ENST00000476640 HMCN1Q96RW7 5635 aa4.69□□□□□ -1.66
HMGCS2-203ENST00000476640 TNP1P09430 55 aa4.69□□□□□ -1.66
HMGCS2-203ENST00000476640 C10orf95Q9H7T3 257 aa4.67□□□□□ -1.66
HMGCS2-203ENST00000476640 LCE3AQ5TA76 89 aa4.66□□□□□ -1.66
HMGCS2-203ENST00000476640 CDC42SE1Q9NRR8 79 aa4.65□□□□□ -1.67
HMGCS2-203ENST00000476640 KRTAP5-4Q6L8H1 288 aa4.64□□□□□ -1.67
HMGCS2-203ENST00000476640 A8MU10 97 aa4.63□□□□□ -1.67
HMGCS2-203ENST00000476640 PSPHP1O15172 72 aa4.63□□□□□ -1.67
HMGCS2-203ENST00000476640 KRTAP4-3Q9BYR4 195 aa4.61□□□□□ -1.67
HMGCS2-203ENST00000476640 AHNAK2Q8IVF2 5795 aa4.6□□□□□ -1.67
HMGCS2-203ENST00000476640 A6NED7 52 aa4.58□□□□□ -1.68
HMGCS2-203ENST00000476640 PRR15LQ9BU68 103 aa4.58□□□□□ -1.68
HMGCS2-203ENST00000476640 LINC01558Q9Y6Z2 57 aa4.58□□□□□ -1.68
HMGCS2-203ENST00000476640 KRTAP4-6Q9BYQ5 205 aa4.55□□□□□ -1.68
HMGCS2-203ENST00000476640 KRTAP5-10Q6L8G5 202 aa4.54□□□□□ -1.68
HMGCS2-203ENST00000476640 KRTAP12-3P60328 96 aa4.51□□□□□ -1.69
HMGCS2-203ENST00000476640 KRTAP4-7Q9BYR0 210 aa4.45□□□□□ -1.7
HMGCS2-203ENST00000476640 KRTAP5-7Q6L8G8 165 aa4.41□□□□□ -1.7
HMGCS2-203ENST00000476640 KRTAP5-3Q6L8H2 238 aa4.41□□□□□ -1.7
HMGCS2-203ENST00000476640 SPRR5A0A1B0GTR4 108 aa4.39□□□□□ -1.71
HMGCS2-203ENST00000476640 KRTAP20-2Q3LI61 65 aa4.39□□□□□ -1.71
HMGCS2-203ENST00000476640 UQCR11O14957 56 aa4.37□□□□□ -1.71
HMGCS2-203ENST00000476640 KRTAP12-4P60329 112 aa4.37□□□□□ -1.71
HMGCS2-203ENST00000476640 KRTAP5-5Q701N2 237 aaPredicted RBP4.36□□□□□ -1.71
HMGCS2-203ENST00000476640 KRTAP25-1Q3LHN0 102 aa4.34□□□□□ -1.71
HMGCS2-203ENST00000476640 KRTAP19-4Q3LI73 84 aa4.32□□□□□ -1.72
HMGCS2-203ENST00000476640 MIR22HGQ0VDD5 57 aa4.28□□□□□ -1.72
HMGCS2-203ENST00000476640 K7ERS5 55 aa4.27□□□□□ -1.73
HMGCS2-203ENST00000476640 LOC100996750A0A140TA64 210 aa4.23□□□□□ -1.73
HMGCS2-203ENST00000476640 PRAC1Q96KF2 57 aa4.22□□□□□ -1.73
HMGCS2-203ENST00000476640 KRTAP23-1A1A580 65 aa4.17□□□□□ -1.74
HMGCS2-203ENST00000476640 KRTAP15-1Q3LI76 137 aa4.16□□□□□ -1.74
HMGCS2-203ENST00000476640 SYNE1Q8NF91 8797 aaKnown RBP4.15□□□□□ -1.74
HMGCS2-203ENST00000476640 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
HMGCS2-203ENST00000476640 A0A0A0MQY5 61 aa4.12□□□□□ -1.75
HMGCS2-203ENST00000476640 ROMO1P60602 79 aa4.11□□□□□ -1.75
HMGCS2-203ENST00000476640 KRTAP4-11Q9BYQ6 195 aa4.06□□□□□ -1.76
HMGCS2-203ENST00000476640 MT1AP04731 61 aa4.04□□□□□ -1.76
HMGCS2-203ENST00000476640 KRTAP5-2Q701N4 177 aa4.03□□□□□ -1.76
HMGCS2-203ENST00000476640 KRTAP6-1Q3LI64 71 aa4□□□□□ -1.77
HMGCS2-203ENST00000476640 KRTAP9-4Q9BYQ2 154 aa3.92□□□□□ -1.78
HMGCS2-203ENST00000476640 KRTAP5-8O75690 187 aa3.91□□□□□ -1.78
HMGCS2-203ENST00000476640 AHNAKQ09666 5890 aaKnown RBP3.88□□□□□ -1.79
HMGCS2-203ENST00000476640 KRTAP6-2Q3LI66 62 aa3.87□□□□□ -1.79
HMGCS2-203ENST00000476640 MUC5ACP98088 5654 aa3.86□□□□□ -1.79
HMGCS2-203ENST00000476640 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
HMGCS2-203ENST00000476640 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
HMGCS2-203ENST00000476640 OBSCNQ5VST9 7968 aa3.78□□□□□ -1.8
HMGCS2-203ENST00000476640 MUC5BQ9HC84 5762 aaPredicted RBP3.77□□□□□ -1.81
HMGCS2-203ENST00000476640 NDUFAF8A1L188 74 aa3.73□□□□□ -1.81
HMGCS2-203ENST00000476640 MT3P25713 68 aa3.73□□□□□ -1.81
HMGCS2-203ENST00000476640 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
HMGCS2-203ENST00000476640 LUZP6Q538Z0 58 aa3.62□□□□□ -1.83
HMGCS2-203ENST00000476640 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
HMGCS2-203ENST00000476640 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
HMGCS2-203ENST00000476640 INE1O15225 51 aa3.27□□□□□ -1.89
HMGCS2-203ENST00000476640 KRTAP4-2Q9BYR5 136 aa3.27□□□□□ -1.89
HMGCS2-203ENST00000476640 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
HMGCS2-203ENST00000476640 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
HMGCS2-203ENST00000476640 LCE3DQ9BYE3 92 aa2.96□□□□□ -1.94
HMGCS2-203ENST00000476640 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
HMGCS2-203ENST00000476640 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
HMGCS2-203ENST00000476640 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.89□□□□□ -1.95
HMGCS2-203ENST00000476640 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
HMGCS2-203ENST00000476640 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
HMGCS2-203ENST00000476640 KRTAP21-2Q3LI59 83 aa2.63□□□□□ -1.99
HMGCS2-203ENST00000476640 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
HMGCS2-203ENST00000476640 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
HMGCS2-203ENST00000476640 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
HMGCS2-203ENST00000476640 PRM1P04553 51 aa2.03□□□□□ -2.08
HMGCS2-203ENST00000476640 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 75.1 ms